MELO3C031069.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAAAAGATTCCTCCATGAGTGTATAAATATGGTTAATGATATGTGTTGGTAATAAGGCAGTGAAAGAGTTTGGGTTTTGTGATATTCCAAATTTGTTATATCGTAAACTCCCCAAGGGCAGGAAAGGATGAGTTATACGTGTACTGTAGCTGTTACTGTGAAACCCAAAAGCAAAGATGACTTTCCTTCGAATGAAGTCATAAATCTCGAGTTTGCTAGCGTCAATTTGGATTCGAGTAAGTCCTCATCCTCTCTTTTATTTATTTATATATGTTTTTCTTCACTGCTAATGTAACCTATATATATATTCTTCTGATGTAAAGTGATTTAATAACGCACATATGACATATGTACATATACACAGATGAACAGCCAAAGTTTATCACATGTATTGCTCAATTAAAAAGTGGTAATAATAAAGTGAGCAAGCTGTTCGAAGGTAGTATTGAGGTTGCTAGAGATTTTGGGGAGATTGGAGCAGTGATTGTTGAATTGCATGAACGTACAAAGAATGAGAGGTTTATCGACACCATTTCTGTTGAGGCCGAAGAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATGGGTGCAACCCAAGGGTCTTATTGCCCACCGAAGGATCTTCTTTTCTTCCAACAAGGTGATGGTTTGCTTCATCATTTAA TTGAAAAAGATTCCTCCATGAGTGTATAAATATGGTTAATGATATGTGTTGGTAATAAGGCAGTGAAAGAGTTTGGGTTTTGTGATATTCCAAATTTGTTATATCGTAAACTCCCCAAGGGCAGGAAAGGATGAGTTATACGTGTACTGTAGCTGTTACTGTGAAACCCAAAAGCAAAGATGACTTTCCTTCGAATGAAGTCATAAATCTCGAGTTTGCTAGCGTCAATTTGGATTCGAATGAACAGCCAAAGTTTATCACATGTATTGCTCAATTAAAAAGTGGTAATAATAAAGTGAGCAAGCTGTTCGAAGGTAGTATTGAGGTTGCTAGAGATTTTGGGGAGATTGGAGCAGTGATTGTTGAATTGCATGAACGTACAAAGAATGAGAGGTTTATCGACACCATTTCTGTTGAGGCCGAAGAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATGGGTGCAACCCAAGGGTCTTATTGCCCACCGAAGGATCTTCTTTTCTTCCAACAAGGTGATGGTTTGCTTCATCATTTAA ATGAGTTATACGTGTACTGTAGCTGTTACTGTGAAACCCAAAAGCAAAGATGACTTTCCTTCGAATGAAGTCATAAATCTCGAGTTTGCTAGCGTCAATTTGGATTCGAATGAACAGCCAAAGTTTATCACATGTATTGCTCAATTAAAAAGTGGTAATAATAAAGTGAGCAAGCTGTTCGAAGGTAGTATTGAGGTTGCTAGAGATTTTGGGGAGATTGGAGCAGTGATTGTTGAATTGCATGAACGTACAAAGAATGAGAGGTTTATCGACACCATTTCTGTTGAGGCCGAAGAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATGGGTGCAACCCAAGGGTCTTATTGCCCACCGAAGGATCTTCTTTTCTTCCAACAAGGTGATGGTTTGCTTCATCATTTAA MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEPPISVTFSCKSWVQPKGLIAHRRIFFSSNKVMVCFII
BLAST of MELO3C031069.2 vs. NCBI nr
Match: XP_016900735.1 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo]) HSP 1 Score: 271.6 bits (693), Expect = 1.5e-69 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of MELO3C031069.2 vs. NCBI nr
Match: XP_008449948.1 (PREDICTED: putative lipoxygenase 5, partial [Cucumis melo]) HSP 1 Score: 169.5 bits (428), Expect = 8.0e-39 Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = 0
BLAST of MELO3C031069.2 vs. NCBI nr
Match: KGN54126.1 (hypothetical protein Csa_4G286990 [Cucumis sativus]) HSP 1 Score: 166.4 bits (420), Expect = 6.8e-38 Identity = 93/132 (70.45%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of MELO3C031069.2 vs. NCBI nr
Match: XP_004142238.2 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37 Identity = 93/131 (70.99%), Postives = 101/131 (77.10%), Query Frame = 0
BLAST of MELO3C031069.2 vs. NCBI nr
Match: XP_011653578.1 (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37 Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 0
BLAST of MELO3C031069.2 vs. TAIR10
Match: AT3G45140.1 (lipoxygenase 2) HSP 1 Score: 49.3 bits (116), Expect = 2.2e-06 Identity = 25/72 (34.72%), Postives = 40/72 (55.56%), Query Frame = 0
BLAST of MELO3C031069.2 vs. Swiss-Prot
Match: sp|P38418|LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.0e-05 Identity = 25/72 (34.72%), Postives = 40/72 (55.56%), Query Frame = 0
BLAST of MELO3C031069.2 vs. TrEMBL
Match: tr|A0A1S4DYE1|A0A1S4DYE1_CUCME (lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107991007 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 9.9e-70 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of MELO3C031069.2 vs. TrEMBL
Match: tr|A0A1S3BP51|A0A1S3BP51_CUCME (putative lipoxygenase 5 OS=Cucumis melo OX=3656 GN=LOC103491677 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 5.3e-39 Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = 0
BLAST of MELO3C031069.2 vs. TrEMBL
Match: tr|A0A0A0L1V1|A0A0A0L1V1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286990 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 4.5e-38 Identity = 93/132 (70.45%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of MELO3C031069.2 vs. TrEMBL
Match: tr|A0A0A0KX73|A0A0A0KX73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287550 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25 Identity = 67/99 (67.68%), Postives = 79/99 (79.80%), Query Frame = 0
BLAST of MELO3C031069.2 vs. TrEMBL
Match: tr|A0A0A0KZ89|A0A0A0KZ89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287020 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23 Identity = 71/123 (57.72%), Postives = 84/123 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |