MELO3C030860.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030860.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionSplicing factor U2af large subunit B
Locationchr04 : 19360055 .. 19366166 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTCAAGGTTTTTGGAGTTTTGGTAAATATAATGTACTTATAAGTTTCTTTTTTATCTTTCTTTTTTTTTTTTTTTCTGAAGTTTCCATCACTTTGTTTCTTGTTGCTTATAATGGAAGGATTGTTGTTTTTTTGCATTTTCTCTTGGATTCTTATATATATTTTCATTTTTGGCATTATTCTTGATGGTTGTTTGAAATGAAAAATTGAAGATATCATTTCTCATATCATTTAGTTTTTTTTGTTGCAAGGAATGATGAAAGGAGAAATTTGTTTAACCAAGTGAAATTCCCTAAAATGTTTATTCTTGGTTTATCCCTGTGGTTTTTTAGTCTTGTGAACTAAGGAAGTAATGAATTTCTGTTGTTGTGCATTATGTTTGTCGATAAATTTGCAGCCCAAAAAATCCAACACTTTTAGGGTTAAATGTGGGACATGGAATTCGTGTGAAATTAAAGGCTTCGAAGGCCAAATAGGGATGGAGATTTCTTCCATTCAATCAAGTTTTTGATACAATGTTACACGAGTTTTGCCATAATCTTCATGGTCCTCACAATGCCAATCTCTACAAGCTTTGGGATGAGCTTTGAAAGGTGTATCATTTATGTTTGTTTTGTTTTCCTAGTCCAATATGATTTTGTAATAAATATCTAAAAAAGACACAAAGATTCATATTCATGTGTTGTCATAGGATCATGGTTCACTTATTTGCAACCTTTCATTTATTAGCCTTTGATAAGTGATGATGCATTTGATTGATTAAACTCTTTGCCATGGTTTGCCACCTGAAATTTTTGTTAGTAATTTATTGTATTGCTTAGTAGATGATAGTTCATTGTTATAAATCCCAAATCTCTAATTCAACTGATGAGCATTACGAATTGTCTAATTTTATTAGATTGTTGTTCTTTATACAGTAAGCGTATAAGAACTGAATGTGGCATCATGCCATTAATTTCAACAGCCACACACAAATGCAGAGTGAATTAATATAGTTTTGCTCTTCACGTGAAGTTTTAGACTTCAAGCTTCTGCTAATGGAGATGGTTATTCATAGATTTTAACAAACCTAGCCATTTTGCACCAAGCTAAATAAGCAAGCCATTTCAATAAATTTTAACTTTTTTTTTGTTGCACCAGTAAGAAGAAATCTTTCAATTTTTTGAGTTTACATTGTGCATGTAGATTCTTTTTTATGGTGTTGAAGTGGTGCTGATTTTCATTTTTTGTGAGTATTTTCTTTTTTTTTCTTCTCATTTGGAGATTTAATGCTTTAATTGTTGTAGGAATATGAAACTCTAATTTGTGCACCTTTCATTTTCCATTTTGATTAGCATTCTAGTTTTTCTTTCTGTATTTTCACTTTTTTTTTGTTTTTTGTGTGAAAGAGCTTTCCAGAAAATTCTTCCTTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGGATTAAAAATAAAACCCTAACTAAGTACTCTCATAAAGAGTTAGAAAAAAAAAGTTATCTATATATATAACTAAAACATCAAACGATTAAAGCAATTAAACTAAGTAATATACATCTAACACAGACCTAACTTTATTGATAAAGTATTTATTTCATGAAACTATATGAAATCAATATTTTCCTAAGGGAATGACAGTTTACTGGTCCGCTTGATACTAACTACTAATTTGTTTTTATTTTTTTCTGGAAAGAAAAAAACAAAAACCAAGCTACAAAAGCATTAGCTAACAACTCTTAAATCAAATGTCAATTTATGGTAGGTATTTCAACCAAATTTGTTCTTATAAATAATTTTTTTCATGGTGTATAACAAAATTTGACGTGATAACAATCATTAGCATTCATCCATCAACTTGCATTAAACATCTTACATTATCCTCTTTCTTGAAGTAGCTTGCATTAGCTTGGTTTCGTAAGAGTTACAGATAGAGGAATGAAACTCAAATGACTTGTTTTGAGTTGATTCCAACCAGCTCCCATTTTTACATTTGGCACAAAAGTTGTGTTTCACCTTGATATCACTAACCAAAAGACATTTTCCCTATGAAGTACTTTTATAAGGAAGGATGTCATTTTGCTTTCTGAATGTTTTTTTTTTTTTTTGTTGAGAGACATATGTAGTAAAAATGTTCAATTTTCCAAGTTCTTCACTATCGGGAGTTAGCTTTATTTATCTCTTTTACTATGCTGTCATATTTTTAAGGTTTAATATCTTCATGATAAGAGTTGATTTGTTCTGCTGTAACCTTTTTGAAGCTATTATCATAGGGTGATTTATTTGAAACAATTCTTACAAATATTATCAATAACTTGGTAGGAAGTGAAAGAACTCATAGGGCTAGCACTAGAGAAAGTCTTACTCAAATGGATGAATTTTCATCTGGAAAAAGCTGGCTATTAGAAACAAGTTACAAGTTTTTCATCATATGTGAAGGTTAGCCCACTAATTGTATATATTGCACATAATACTTTATAACTCATTCATGTACATGATACTTTCCAAGCATCAGATGTGTAAGATTTTTATGGATTGTGTTCTTTAATTATTGGGTAAGTCAAGACTTTGAGGTTTAGTTTGGTCTCTGGAACTATTTTCTTTTCTAACTTCACTATGTGAATGACTTTTAAAATGAAAATATGATTGCTGTTGTAAGTTCTTATTACCTTCTCTATCATTAAATTGCCCTCTCTATGTATAAATGCATGTATTATTAAAAGTAGTATGCTGCTATCTTTATATGCAATAGTATTTTTGAGCAAAGAAACTTTAACGCTTGGATCTGGTTATATCCTAATTATAGTAGTAATTGATAATATATTTTTCCAGGTCATTTTCTACTAGAGGAGGATGATAAGTTTCTAGATAAGGTTTGAGCTACAGTTCAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACAGATGCTGCCAAGGGCGCCATTGCTACTGCTGAGGTCTCTAGGAAGACTATTCCAACTTACCTTGAATCAAGGAATCCAATATTTAAGTCTCTATGAACTATGGTTAGTGGAATGGCGAATCATCCCTTCATTTGGTGCCTTTTCATTATGGCTCTTTGGCATAAATTTTTCTAACTTTTAACTTGACAAGGCGGATGTGTGTTTCTAGGAGAATCATTGCCGATCTGTATAAAATGAGTATGTGCTATTAATAATGTAGGCAGGAAGTTGCATTACGTCAGGGAGAGGTATTTACAACATCAAATACGTAACATTTATGATCGTGAACATAAGGAAGGTTAGCTTTCACCATTGAAATAATTAGTGCATTGAAGTTGCTAAGATGCCATATTTTTTTGCAACTTTTATCAATGGATGGAACTATAAAGATCCTGAAAACTCCTTAGTAAGTAACATCATCTCTCAACACTCCTTGTAAAATCGGTGTACGCATTATTCAAATGATTTAGATTGTGTTGAGAAATGATGGATGATTAATAATGTAAACAAGTTCTTTGGATTAAAAAGCATGTATTCATCAATGTTTGACATTCAAGAAAATTGCGGACTCTGCTATATGTGATATTTGCTGAAATAGCATTCTTCAAGTAAGCAACCTGATGCTAAAGCTTAAGCTCATAACGACTTAGTTTAAGGTAAAAGGATCGGACATGACACATAACATAGCTGAGACTTGAGATTGTTCATATTATCGTTGCGTTTAATTTTAACTTTTTAGAATATTTTCTTTTGGGAGAGTATGTCTTCTCTTTATGTCTAGTTTTAGGAATGTTGCATTTCTTTCACAGCAATGAGTAGTGGTTTATTAATTGATGACGATGTTGGATATTGATTCTGCTCGTTTTCCTCCCTTAATTATTGCAGTTTTTCTTCCCATATTTTCTTGTCCAAAGATCACCATTTGTGCATCCAATTGCAGTTCTTCAGCTCATTTGGTTTGTGTAGATTTTGGTTTCCATTAATATTTTAATTCTGCATTGCTAAATGCAATATATCACTCTATTCATAAAAATAATTGAAGAACTTATCAAGAAAGCTATGTTTTCCTCTCCCTTTCTCATGTCCAATTGTTGATAACCTTGGCTTTTTCCTTTTCATTTTCATGTTTTGTAGCTATTTACCCAAGGCATACTGGAAATGTTTTTCATGTAATAGCTAATAGGATGCTATATTTATTATTTATTCACAAAGTTCATTTGTTGTTTGCAGTCTGTTGCCACATTTTTCAGTCAGGTTATGGTAGCAATAGGAGAAAATACCGCAGGCCCTGGTGTGGTGTTTTTTTTTTAAGATTTAAAAAAAAAAATCTTTGTGATAATGTGGTTTGCTTAGAACTTTTTTTTTCAAATAAGTTGGATTCTGTTTTTTACGTTTTTGTTTTGTTTGTGATATATGTACTGAATTATGCAGGTTTTGGTTGCGAGGACTTGCAATGGTATATTTGTATATATTTTTTACTTTAGTAGAGGTAGCTTGACATTGAGTTTAGGGAATCTGTTAATGAACAGAGACGGAGGTAATGGAATTTTCTAAAGTTAATATATTTCTTATAGTACTTGTTAGAATTCTAAAGATTAAATGGTTTATTTTGATATTGTTTGTAGAATGATTGAAGTCATATCAGGTTGAAAGCTAAGCAACTGTATAGATAGCCAGACGATCGTTGAAGGTTGAAGACTGAGAAGGTATTTAGGATTTCTTATTTAAATCTTGTATTAGGATCTTTTTCATGTACTGTTGTAGAATGTATGTATAATACAATATTAAGATTTCATTTTGTGTATGCAAATGTAAAAGACAAATATTAAAGTTTCTAAAATAATATTAATTTTATTGA

mRNA sequence

ATGGCGAGTCAAGGTCATTTTCTACTAGAGGAGGATGATAAGTTTCTAGATAAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACAGATGCTGCCAAGGGCGCCATTGCTACTGCTGAGTCTGTTGCCACATTTTTCAGTCAGGTTATGGTAGCAATAGGAGAAAATACCGCAGGCCCTGGTGTGCTTGACATTGAGTTTAGGGAATCTGTTAATGAACAGAGACGGAGAATGATTGAAGTCATATCAGGTTGAAAGCTAAGCAACTGTATAGATAGCCAGACGATCGTTGAAGGTTGAAGACTGAGAAGGTATTTAGGATTTCTTATTTAAATCTTGTATTAGGATCTTTTTCATGTACTGTTGTAGAATGTATGTATAATACAATATTAAGATTTCATTTTGTGTATGCAAATGTAAAAGACAAATATTAAAGTTTCTAAAATAATATTAATTTTATTGA

Coding sequence (CDS)

ATGGCGAGTCAAGGTCATTTTCTACTAGAGGAGGATGATAAGTTTCTAGATAAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACAGATGCTGCCAAGGGCGCCATTGCTACTGCTGAGTCTGTTGCCACATTTTTCAGTCAGGTTATGGTAGCAATAGGAGAAAATACCGCAGGCCCTGGTGTGCTTGACATTGAGTTTAGGGAATCTGTTAATGAACAGAGACGGAGAATGATTGAAGTCATATCAGGTTGA

Protein sequence

MASQGHFLLEEDDKFLDKEEERQALAAADTDAAKGAIATAESVATFFSQVMVAIGENTAGPGVLDIEFRESVNEQRRRMIEVISG
Homology
[Close]
BLAST of MELO3C030860.2 vs. NCBI nr
Match: OMP06254.1 (hypothetical protein CCACVL1_01650 [Corchorus capsularis])

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06
Identity = 36/47 (76.60%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFLDK      EEERQALAAADTDAAK AIATAE
Sbjct: 226 LKKQGHFLPEEDDKFLDKVRAAVEEEERQALAAADTDAAKDAIATAE 272

[Close]
BLAST of MELO3C030860.2 vs. NCBI nr
Match: OMP08543.1 (hypothetical protein COLO4_06373 [Corchorus olitorius])

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06
Identity = 36/47 (76.60%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFLDK      EEERQALAAADTDAAK AIATAE
Sbjct: 167 LKKQGHFLPEEDDKFLDKVRAAVEEEERQALAAADTDAAKDAIATAE 213

[Close]
BLAST of MELO3C030860.2 vs. NCBI nr
Match: XP_011037199.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Populus euphratica])

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-06
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           M  QGHFL EEDDKFL++      EEERQA+AAA+TDAAKGAIATAE
Sbjct: 239 MKKQGHFLPEEDDKFLERVRAAVEEEERQAMAAAETDAAKGAIATAE 285

[Close]
BLAST of MELO3C030860.2 vs. NCBI nr
Match: XP_011037213.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Populus euphratica])

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-06
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           M  QGHFL EEDDKFL++      EEERQA+AAA+TDAAKGAIATAE
Sbjct: 239 MKKQGHFLPEEDDKFLERVRAAVEEEERQAMAAAETDAAKGAIATAE 285

[Close]
BLAST of MELO3C030860.2 vs. NCBI nr
Match: XP_004134317.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Cucumis sativus] >KGN56473.1 hypothetical protein Csa_3G121010 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 5.6e-06
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFL+K      EEERQALAAADTDAAK AIATAE
Sbjct: 237 LKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAE 283

[Close]
BLAST of MELO3C030860.2 vs. TAIR10
Match: AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor)

HSP 1 Score: 40.4 bits (93), Expect = 6.4e-04
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 38  ATAESVATFFSQVMVAIGENTAGPG 63
           A  +SVATFFSQVM A+G NTAGPG
Sbjct: 250 ANEQSVATFFSQVMAAVGGNTAGPG 274

[Close]
BLAST of MELO3C030860.2 vs. TrEMBL
Match: tr|A0A1R3KGU5|A0A1R3KGU5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01650 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-06
Identity = 36/47 (76.60%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFLDK      EEERQALAAADTDAAK AIATAE
Sbjct: 226 LKKQGHFLPEEDDKFLDKVRAAVEEEERQALAAADTDAAKDAIATAE 272

[Close]
BLAST of MELO3C030860.2 vs. TrEMBL
Match: tr|A0A1R3KN70|A0A1R3KN70_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06373 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-06
Identity = 36/47 (76.60%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFLDK      EEERQALAAADTDAAK AIATAE
Sbjct: 167 LKKQGHFLPEEDDKFLDKVRAAVEEEERQALAAADTDAAKDAIATAE 213

[Close]
BLAST of MELO3C030860.2 vs. TrEMBL
Match: tr|A0A1S3AVD0|A0A1S3AVD0_CUCME (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483235 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-06
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFL+K      EEERQALAAADTDAAK AIATAE
Sbjct: 235 LKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAE 281

[Close]
BLAST of MELO3C030860.2 vs. TrEMBL
Match: tr|A0A1S4DT14|A0A1S4DT14_CUCME (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483235 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-06
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFL+K      EEERQALAAADTDAAK AIATAE
Sbjct: 235 LKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAE 281

[Close]
BLAST of MELO3C030860.2 vs. TrEMBL
Match: tr|A0A1S3AV88|A0A1S3AV88_CUCME (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483235 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-06
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MASQGHFLLEEDDKFLDK------EEERQALAAADTDAAKGAIATAE 42
           +  QGHFL EEDDKFL+K      EEERQALAAADTDAAK AIATAE
Sbjct: 176 LKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAE 222

The following BLAST results are available for this feature:
BLAST of MELO3C030860.2 vs. NCBI nr
Match NameE-valueIdentityDescription
OMP06254.11.9e-0676.60hypothetical protein CCACVL1_01650 [Corchorus capsularis][more]
OMP08543.11.9e-0676.60hypothetical protein COLO4_06373 [Corchorus olitorius][more]
XP_011037199.14.3e-0672.34PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Po... [more]
XP_011037213.14.3e-0672.34PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Po... [more]
XP_004134317.15.6e-0674.47PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Cucumis sativ... [more]
BLAST of MELO3C030860.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36690.16.4e-0476.00U2 snRNP auxilliary factor, large subunit, splicing factor[more]
BLAST of MELO3C030860.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030860.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1R3KGU5|A0A1R3KGU5_COCAP1.3e-0676.60Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01650 PE=4 ... [more]
tr|A0A1R3KN70|A0A1R3KN70_9ROSI1.3e-0676.60Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06373 PE=4 SV=1[more]
tr|A0A1S3AVD0|A0A1S3AVD0_CUCME3.7e-0674.47U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis mel... [more]
tr|A0A1S4DT14|A0A1S4DT14_CUCME3.7e-0674.47U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucumis mel... [more]
tr|A0A1S3AV88|A0A1S3AV88_CUCME3.7e-0674.47U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X3 OS=Cucumis mel... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030860.2.1MELO3C030860.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030860.2Wax gourdmedwgoB394
MELO3C030860.2Cucumber (Gy14) v2cgybmedB176
MELO3C030860.2Cucurbita maxima (Rimu)cmamedB258
MELO3C030860.2Cucumber (Gy14) v1cgymedB250
MELO3C030860.2Cucurbita maxima (Rimu)cmamedB483
MELO3C030860.2Cucurbita moschata (Rifu)cmomedB240
MELO3C030860.2Cucurbita moschata (Rifu)cmomedB468
MELO3C030860.2Cucurbita pepo (Zucchini)cpemedB623
MELO3C030860.2Cucurbita pepo (Zucchini)cpemedB674
MELO3C030860.2Wild cucumber (PI 183967)cpimedB196
MELO3C030860.2Cucumber (Chinese Long) v2cumedB195
MELO3C030860.2Bottle gourd (USVL1VR-Ls)lsimedB457
MELO3C030860.2Watermelon (Charleston Gray)medwcgB343
MELO3C030860.2Watermelon (97103) v1medwmB356
MELO3C030860.2Silver-seed gourdcarmedB0212
MELO3C030860.2Silver-seed gourdcarmedB0473
MELO3C030860.2Cucumber (Chinese Long) v3cucmedB201
MELO3C030860.2Watermelon (97103) v2medwmbB338