MELO3C030779.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030779.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionmediator of RNA polymerase II transcription subunit 13
Locationchr04 : 13439859 .. 13443630 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCATTTTTGCTGCTACCGAGGAGGCAATCTTTGTGCATGTCATTTTATCTGCAAATTAATTTTTTTTCCTACTTGTTTTAAGATGCTGACAATGCAGGTTAAGTTGATAATTAACGGATGTTTTCCTACACATTATCGAGCACTATCAAATGCAGAGATTGAAAGAATTTTGAAGAATTCTGCCCATATAATTCCTGTCTTGGACTTCCAGGTTAGCTGCGAAATTCAAACTGTAGGCCAATTTTTTAATTTTCTTATGGTTGATTATTTTGCCATTAAATAATACTTAGTTAGTTTCATCCTAAAAAAGTTTCTTGTACGTGGATAATTTCTCTATAAATACGGGCTTTAGGTTCTTGTTTTAGGAATAATTTGTTATTTAATACTTTTATTTAAAATAGGAATAAAATTTATTTGTTACAATTATTATAAAATAGGAGGCATTGTGATTTGTGGCTATTTAATTTTTGCATCATTTATAATTAAAATATCTCAATTGTTTACTACTTGAAAAACATTTTTTATTTTTTACTTCAGCTTGAATTGCATATGTCAGGTTGATGTTGATTTTCCATTATCCATGCACATAATTTCTTTAACGTTCTTTTATTTTCAGCGATTGATATGCCTCATGGAATTCGAGGTAGGTTTACTGGGTGTTGTGCCAGTGATGTTGTAAAATGGATATATTTCAGGGTATGTCGTATACTTTCCATTTGGTAGAGTTCTGTAGTAGTGCAAGTCATCATTCCTTTTTTTTTGTTCTTCGTGGAAATCCATCTTTTTAATTATTGGGGCATTTACCGATCTTGCTCTTCTCTTCTAGTTCTCTTGCGTTCCTATTGTTTTTTTTTTTTTTTTTTCAAAATTATTTGTTTGGTTAATGCTTGGTGAGTTAAGTTTTTGAATGTGATTACAACCTCATATGTTGCCTAACATTGTGTTTTTACTTAGAAATGATCTAGATTACTAAATTATAGAAGCGTTTCAAGTAGAATAAAGAAGTCTTAACACAAAAAAAAAAAGAAGAAGAAAACTAGTAACCAAATAAACAAAATAAGATAATTACATGTTACAAGTATCAAGTAAAACGCTTGTTTATCACAGGTTTCATGTCTGAATGAAGATTTTAGGCAAAAGAAGGAGGAATTACCAAGCGATAAACATCAGGCGATAAGGCGCACGTCAATAGGCGACGAGCAAAAGGATGCTAGGCGATCTACATCGCTAAAAGATAAGGTGGTTGGTGTGAATGTCAGAAAATGACAAAAAGATGTCTGCAGCACTATGTAGGTTTATCAAAGAATTAATGGCACCCAGACGATGTTAAGTCCCATTGGTTTTTGCTTATAAATACAAGGTTATCTCCTCAAGACAAGGGTGCAAACATCTGAAGATAAAGCTCAACTTTCTACTTCGCCTAGCAAAAATGGAACCAATAAGCATAAGAAATTATGCTTAGAGGCTCGACTCATTCCCTGTATCTTTCACTTGTAATTGCTTTTCCTTTTGTATTTTTAATCTGAACCCCATTGCCAAGAGGCCTAAAATTTTACTTATAAATGCAATACACTACTACTTTCACTCACCCATTTCTTTATCTTTTCATAATATTAGTTATGTGTCATTGTGATAAAATGCAAAGCATAATTAGTTCAGTAGAGAATTTGGATGTTAGCATCATTTATCTTGTTTAACTAGATGTTGTACTCAATATATTATTATATTCAAAAGAAAGAATGAGGTATTGGACATTATCACTCGAGAGAGTAATGACATGGACCTCTTTAAATAGGCGATGAAGAGAGTGTAGCCATACACCCTTGTTAGTGGATTCCTCCTTAACACTCCTTAACATACATATCAGAAATGCGAGTGTGTGTGGCGATAAGGCACCGAGAGGTTGCTCGCCTTATATAGAATGAACTATTGATCATATATAAATCATATGGTAATTTCAAGTATTTGCATCCTAAAAGGAGCGCAAGTAGGCTCGTATAAATTTGAAATTAATAAATGATTTGTATCGCCTTAATCAAGTAATTAACCTTGTAATGCATTAAAGTGCATAAAATTTCCTTCTCCTATCTCCCTTAATTAAAGTTGAGTTCACAATCACACATAAACACCACTTTCACCTTCATCTTCTCTCCCTTCGCATGTAGTATAGTTAGGTTTAGAATAGTTTCTACGTTGAATACTTCTATACTGCACACTCATTGCATGAATTTAAATCACACATTATAACCTTAAGTAACAATGATTTCCTGTGTTCGACCTTGACTTATCCAAGAAACCTCCTTTTTCCTTTTACACTTGGACAAGAGATCAGAGGAAAACTTATACGCAATTGATATATCATTAGTAATGAGCAACGTATAAGTAGGCGTCAGCCATAACTTAGTAGTCTAGTCACATACTTAGAACCAAAGATTTCATACCCACAAAAGCTCAGAAAGCATTGCACACATTCAAATAAGCAATGATCCGTAAAACCAATGTTTAGGTAAAGGGGAATGTTGTCTGAGAGAATGTTTGGATATTTTGTTTCTTTCTTATAATGGATCCTCGTATTCATTAGGAGTTGGAATTGTTAAATTATCATTTATGTTTTGAGGAACAATGTTTTTTTGTGTGGAAGAAAGTAGAGATAGTGAGGAAATCATCTTTTTTGTTTCTTGGAGGTAGAGTCTTTCTTCTTCTTCTTCTTGATTATTCTTTTTGAAACTTCAGCCAACTTCTATATTGAAGAGGATCTGAATCCAGGTTAATCTTTGAAGAAGTTATTGTACATTCCTTTGCTAGGTACCCTATTTTTCCACAATTGTAACAAAAGTTGAGGTGTCGTTCGTATTTTACACGTATCTGTGTGCTATCTTGATCACCTCCTTTATCGATCCAAATCTCTCTTCTCACGGGCTTGGTGATGTAGATCAAGATTTTGATTCTAAGGCTTTTTCCCCAACAAAAGTTATCTTAGTTGAAGTCGACTTCAAGAAATAACCCAAATGCATCTTCTAATCTTTTGGCCAAAAATATTGAATCTGTTTTGAAAGCCAAAAGAGATATCCATGAAATGGACCCAAAATGCAACCTTTTCGAAAGATAGTTGAGATAGTTTGACGTTTGTGTTTGGGACCTCCAGAGCTTGTAATGAGTTATTTGAAAGCCAAAGATCAAGTCTTAAAACCATCTCTTCATCCCTTTGTAGGTAGATGTTTTTCCCTAGATTTCCAACATAAAAACTAAGTTTTGTTCTCCACACATTGGTGAAAACATTCTTTATTATCCCAGACTTTATGATTCGAGATGTTAATAGTTTGTCGAGGACCAGTCAATAGTCTATTTGTCCATGCATTAGAGTCCCTAACTGAGGATCAAAGCCTATTTTGGTTGTCTTTTTTGCTTTGGAAAGTTGAAGTTTCTTTAATTCTTCAGCAAAATCTTTTTTTGCCATCCTTCGATATACAACCGGTGGTGTCTTTGTGATCACTAGTCGAAGAAAGGAGTCGGTCGTTCCCTTGTAAGAAAGGAACACCTTATGTTAATAAGTTATTTCACCAACCCAACAATGATGGCTGATAACCTCCTCGGACCAAGATCCTTGGAGTTCAAATGTTTTTACTTTATACATATGAGTTAAATATAATATACTATATTCTTTTTAAGAGTATTAGATTATATGAATTTTTCTTTTCTTCCTAAGATTTTATTTTTTAGGATTTTTTTCTAGCAGTATTTCAACCAGACATATTTCATATATAA

mRNA sequence

ATGAAGTTCATTTTTGCTGCTACCGAGGAGGCAATCTTTGTGCATATGCTGACAATGCAGGTTAAGTTGATAATTAACGGATGTTTTCCTACACATTATCGAGCACTATCAAATGCAGAGATTGAAAGAATTTTGAAGAATTCTGCCCATATAATTCCTGTCTTGGACTTCCAGCTTGAATTGCATATGTCAGCGATTGATATGCCTCATGGAATTCGAGGTAGGTTTACTGGGTGTTGTGCCAGTGATGTTGTAAAATGGATATATTTCAGGGTTTCATGTCTGAATGAAGATTTTAGGCAAAAGAAGGAGGAATTACCAAGCGATAAACATCAGGCGATAAGGCGCACGTCAATAGGCGACGAGCAAAAGGATGCTAGGCGATCTACATCGCTAAAAGATAAGGTAGAGTCTTTCTTCTTCTTCTTCTTGATTATTCTTTTTGAAACTTCAGCCAACTTCTATATTGAAGAGGATCTGAATCCAGTATTTCAACCAGACATATTTCATATATAA

Coding sequence (CDS)

ATGAAGTTCATTTTTGCTGCTACCGAGGAGGCAATCTTTGTGCATATGCTGACAATGCAGGTTAAGTTGATAATTAACGGATGTTTTCCTACACATTATCGAGCACTATCAAATGCAGAGATTGAAAGAATTTTGAAGAATTCTGCCCATATAATTCCTGTCTTGGACTTCCAGCTTGAATTGCATATGTCAGCGATTGATATGCCTCATGGAATTCGAGGTAGGTTTACTGGGTGTTGTGCCAGTGATGTTGTAAAATGGATATATTTCAGGGTTTCATGTCTGAATGAAGATTTTAGGCAAAAGAAGGAGGAATTACCAAGCGATAAACATCAGGCGATAAGGCGCACGTCAATAGGCGACGAGCAAAAGGATGCTAGGCGATCTACATCGCTAAAAGATAAGGTAGAGTCTTTCTTCTTCTTCTTCTTGATTATTCTTTTTGAAACTTCAGCCAACTTCTATATTGAAGAGGATCTGAATCCAGTATTTCAACCAGACATATTTCATATATAA

Protein sequence

MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLELHMSAIDMPHGIRGRFTGCCASDVVKWIYFRVSCLNEDFRQKKEELPSDKHQAIRRTSIGDEQKDARRSTSLKDKVESFFFFFLIILFETSANFYIEEDLNPVFQPDIFHI
Homology
[Close]
BLAST of MELO3C030779.2 vs. NCBI nr
Match: XP_008451019.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 13 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 2.0e-15
Identity = 52/89 (58.43%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
           M+FIFAATEEAIFVH++              H RALSNAEIER+LKNSAH          
Sbjct: 171 MEFIFAATEEAIFVHVILS----------AKHIRALSNAEIERVLKNSAH-------NSC 230

Query: 61  LHMSAIDMPHGIRGRFTGCCASDVVKWIY 90
           L +  I  PHG+RGRFTGCCASDVVK IY
Sbjct: 231 LGLPVIVSPHGVRGRFTGCCASDVVKRIY 242

[Close]
BLAST of MELO3C030779.2 vs. NCBI nr
Match: KGN66362.1 (hypothetical protein Csa_1G599543 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 5.9e-15
Identity = 52/89 (58.43%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
          M+FIFAATEEAIFVH++              H RALS+AEIER+LKNSAH          
Sbjct: 1  MEFIFAATEEAIFVHVILS----------AKHIRALSSAEIERVLKNSAH-------NSC 60

Query: 61 LHMSAIDMPHGIRGRFTGCCASDVVKWIY 90
          L +  I  PHGIRGRFTGCCASDVVK IY
Sbjct: 61 LGLPVIVSPHGIRGRFTGCCASDVVKRIY 72

[Close]
BLAST of MELO3C030779.2 vs. NCBI nr
Match: XP_011660061.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 13 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 5.9e-15
Identity = 52/89 (58.43%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
           M+FIFAATEEAIFVH++              H RALS+AEIER+LKNSAH          
Sbjct: 171 MEFIFAATEEAIFVHVILS----------AKHIRALSSAEIERVLKNSAH-------NSC 230

Query: 61  LHMSAIDMPHGIRGRFTGCCASDVVKWIY 90
           L +  I  PHGIRGRFTGCCASDVVK IY
Sbjct: 231 LGLPVIVSPHGIRGRFTGCCASDVVKRIY 242

[Close]
BLAST of MELO3C030779.2 vs. NCBI nr
Match: XP_022147569.1 (mediator of RNA polymerase II transcription subunit 13 isoform X2 [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 4.3e-13
Identity = 50/91 (54.95%), Postives = 56/91 (61.54%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
           M+FIFAATEEAIFVH++              H RALSN EIER+LK+SA           
Sbjct: 171 MEFIFAATEEAIFVHVIIS----------AKHIRALSNGEIERVLKHSA-------LNSC 230

Query: 61  LHMSAIDMPHGIRGRFTGCCASDVVKWIYFR 92
           L +  I  PHGIRGRFTGCCASDVVK I  R
Sbjct: 231 LGLPVIVSPHGIRGRFTGCCASDVVKQICSR 244

[Close]
BLAST of MELO3C030779.2 vs. NCBI nr
Match: XP_022147567.1 (mediator of RNA polymerase II transcription subunit 13 isoform X1 [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13
Identity = 49/88 (55.68%), Postives = 55/88 (62.50%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
           M+FIFAATEEAIFVH++              H RALSN EIER+LK+SA           
Sbjct: 171 MEFIFAATEEAIFVHVIIS----------AKHIRALSNGEIERVLKHSA-------LNSC 230

Query: 61  LHMSAIDMPHGIRGRFTGCCASDVVKWI 89
           L +  I  PHGIRGRFTGCCASDVVK I
Sbjct: 231 LGLPVIVSPHGIRGRFTGCCASDVVKQI 241

[Close]
BLAST of MELO3C030779.2 vs. TAIR10
Match: AT1G55325.2 (RNA polymerase II transcription mediators)

HSP 1 Score: 60.8 bits (146), Expect = 9.2e-10
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERI----LKNSAHIIPVLD 60
           ++FIFAATEEA+FVH++              + R LS+ + ER+    LKNS++ +PV  
Sbjct: 170 VEFIFAATEEAVFVHVIIS----------AKNVRTLSSGDAERMLRSSLKNSSYRLPV-- 229

Query: 61  FQLELHMSAIDMPHGIRGRFTGCCASDVVKWIYF 91
                    I  PHG+RG  TG C +D+VK +YF
Sbjct: 230 ---------IVSPHGMRGSLTGFCPNDLVKQVYF 242

[Close]
BLAST of MELO3C030779.2 vs. Swiss-Prot
Match: sp|F4I096|MED13_ARATH (Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana OX=3702 GN=MED13 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.1e-07
Identity = 39/113 (34.51%), Postives = 55/113 (48.67%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERI----LKNSAHIIPVLD 60
           ++FIFAATEEA+FVH++              + R LS+ + ER+    LKNS++ +P   
Sbjct: 170 VEFIFAATEEAVFVHVIIS----------AKNVRTLSSGDAERMLRSSLKNSSYRLPAFR 229

Query: 61  FQLELHMS-------------------AIDMPHGIRGRFTGCCASDVVKWIYF 91
             L L  S                    I  PHG+RG  TG C +D+VK +YF
Sbjct: 230 KCLGLAKSEDNRLCYINTSHRPMLFPPVIVSPHGMRGSLTGFCPNDLVKQVYF 272

[Close]
BLAST of MELO3C030779.2 vs. TrEMBL
Match: tr|A0A1S3BQJ3|A0A1S3BQJ3_CUCME (Mediator of RNA polymerase II transcription subunit 13 OS=Cucumis melo OX=3656 GN=LOC103492426 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 52/89 (58.43%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
           M+FIFAATEEAIFVH++              H RALSNAEIER+LKNSAH          
Sbjct: 171 MEFIFAATEEAIFVHVILS----------AKHIRALSNAEIERVLKNSAH-------NSC 230

Query: 61  LHMSAIDMPHGIRGRFTGCCASDVVKWIY 90
           L +  I  PHG+RGRFTGCCASDVVK IY
Sbjct: 231 LGLPVIVSPHGVRGRFTGCCASDVVKRIY 242

[Close]
BLAST of MELO3C030779.2 vs. TrEMBL
Match: tr|A0A0A0LZR0|A0A0A0LZR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599543 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.9e-15
Identity = 52/89 (58.43%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
          M+FIFAATEEAIFVH++              H RALS+AEIER+LKNSAH          
Sbjct: 1  MEFIFAATEEAIFVHVILS----------AKHIRALSSAEIERVLKNSAH-------NSC 60

Query: 61 LHMSAIDMPHGIRGRFTGCCASDVVKWIY 90
          L +  I  PHGIRGRFTGCCASDVVK IY
Sbjct: 61 LGLPVIVSPHGIRGRFTGCCASDVVKRIY 72

[Close]
BLAST of MELO3C030779.2 vs. TrEMBL
Match: tr|A0A2P6QNN1|A0A2P6QNN1_ROSCH (Mediator of RNA polymerase II transcription subunit 13 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0083741 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.5e-10
Identity = 44/97 (45.36%), Postives = 54/97 (55.67%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERIL----KNSAHIIPVLD 60
           ++FIFAATEE IFVH L              H RALS+ ++ER+L    KNS + +PV  
Sbjct: 168 IEFIFAATEEGIFVHALVS----------AKHVRALSSGDLERVLKHSSKNSGYRLPV-- 227

Query: 61  FQLELHMSAIDMPHGIRGRFTGCCASDVVKWIYFRVS 94
                    I  PHGI GR TGCC SD+VK +YF  S
Sbjct: 228 ---------IASPHGICGRLTGCCPSDLVKQVYFSSS 243

[Close]
BLAST of MELO3C030779.2 vs. TrEMBL
Match: tr|F6GUN3|F6GUN3_VITVI (Mediator of RNA polymerase II transcription subunit 13 OS=Vitis vinifera OX=29760 GN=VIT_06s0004g00450 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
           ++FIFAATEEAIFVH++              H RAL++ ++E +LK+S++       +  
Sbjct: 172 IEFIFAATEEAIFVHVIIS----------AKHVRALASGDMEMVLKHSSN-------KYS 231

Query: 61  LHMSAIDMPHGIRGRFTGCCASDVVKWIYF 91
             +  I  PHG+ GRFTGCC SD+VK +YF
Sbjct: 232 ESLPVIVSPHGMLGRFTGCCPSDLVKQVYF 244

[Close]
BLAST of MELO3C030779.2 vs. TrEMBL
Match: tr|A5BD66|A5BD66_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_024992 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0 

Query: 1   MKFIFAATEEAIFVHMLTMQVKLIINGCFPTHYRALSNAEIERILKNSAHIIPVLDFQLE 60
           ++FIFAATEEAIFVH++              H RAL++ ++E +LK+S++       +  
Sbjct: 187 IEFIFAATEEAIFVHVIIS----------AKHVRALASGDMEMVLKHSSN-------KYS 246

Query: 61  LHMSAIDMPHGIRGRFTGCCASDVVKWIYF 91
             +  I  PHG+ GRFTGCC SD+VK +YF
Sbjct: 247 ESLPVIVSPHGMLGRFTGCCPSDLVKQVYF 259

The following BLAST results are available for this feature:
BLAST of MELO3C030779.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008451019.12.0e-1558.43PREDICTED: mediator of RNA polymerase II transcription subunit 13 [Cucumis melo][more]
KGN66362.15.9e-1558.43hypothetical protein Csa_1G599543 [Cucumis sativus][more]
XP_011660061.15.9e-1558.43PREDICTED: mediator of RNA polymerase II transcription subunit 13 [Cucumis sativ... [more]
XP_022147569.14.3e-1354.95mediator of RNA polymerase II transcription subunit 13 isoform X2 [Momordica cha... [more]
XP_022147567.15.6e-1355.68mediator of RNA polymerase II transcription subunit 13 isoform X1 [Momordica cha... [more]
BLAST of MELO3C030779.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55325.29.2e-1039.36RNA polymerase II transcription mediators[more]
BLAST of MELO3C030779.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4I096|MED13_ARATH4.1e-0734.51Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana O... [more]
BLAST of MELO3C030779.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQJ3|A0A1S3BQJ3_CUCME1.4e-1558.43Mediator of RNA polymerase II transcription subunit 13 OS=Cucumis melo OX=3656 G... [more]
tr|A0A0A0LZR0|A0A0A0LZR0_CUCSA3.9e-1558.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599543 PE=4 SV=1[more]
tr|A0A2P6QNN1|A0A2P6QNN1_ROSCH8.5e-1045.36Mediator of RNA polymerase II transcription subunit 13 OS=Rosa chinensis OX=7464... [more]
tr|F6GUN3|F6GUN3_VITVI1.9e-0942.22Mediator of RNA polymerase II transcription subunit 13 OS=Vitis vinifera OX=2976... [more]
tr|A5BD66|A5BD66_VITVI1.9e-0942.22Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_024992 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0016592 mediator complex
molecular_function GO:0001104 RNA polymerase II transcription cofactor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030779.2.1MELO3C030779.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030779.2Wax gourdmedwgoB397
MELO3C030779.2Wax gourdmedwgoB402
MELO3C030779.2Cucumber (Gy14) v2cgybmedB177
MELO3C030779.2Cucumber (Gy14) v2cgybmedB188
MELO3C030779.2Cucumber (Gy14) v2cgybmedB184
MELO3C030779.2Cucumber (Gy14) v1cgymedB012
MELO3C030779.2Cucumber (Gy14) v1cgymedB428
MELO3C030779.2Cucurbita maxima (Rimu)cmamedB545
MELO3C030779.2Cucurbita maxima (Rimu)cmamedB648
MELO3C030779.2Cucurbita moschata (Rifu)cmomedB532
MELO3C030779.2Cucurbita moschata (Rifu)cmomedB636
MELO3C030779.2Cucurbita pepo (Zucchini)cpemedB270
MELO3C030779.2Cucurbita pepo (Zucchini)cpemedB822
MELO3C030779.2Cucumber (Chinese Long) v2cumedB210
MELO3C030779.2Wild cucumber (PI 183967)cpimedB199
MELO3C030779.2Wild cucumber (PI 183967)cpimedB204
MELO3C030779.2Wild cucumber (PI 183967)cpimedB211
MELO3C030779.2Cucumber (Chinese Long) v2cumedB198
MELO3C030779.2Cucumber (Chinese Long) v2cumedB205
MELO3C030779.2Melon (DHL92) v3.6.1medmedB135
MELO3C030779.2Bottle gourd (USVL1VR-Ls)lsimedB370
MELO3C030779.2Bottle gourd (USVL1VR-Ls)lsimedB373
MELO3C030779.2Watermelon (Charleston Gray)medwcgB342
MELO3C030779.2Watermelon (97103) v1medwmB355
MELO3C030779.2Watermelon (97103) v1medwmB367
MELO3C030779.2Silver-seed gourdcarmedB0757
MELO3C030779.2Silver-seed gourdcarmedB0785
MELO3C030779.2Cucumber (Chinese Long) v3cucmedB203
MELO3C030779.2Cucumber (Chinese Long) v3cucmedB209
MELO3C030779.2Cucumber (Chinese Long) v3cucmedB214
MELO3C030779.2Watermelon (97103) v2medwmbB323
MELO3C030779.2Watermelon (97103) v2medwmbB337