MELO3C030746.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030746.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCarbohydrate esterase, putative (DUF303)
Locationchr04 : 11639169 .. 11639393 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTGTTGAAACTATCAATCATGTTATGTACGATGTTATTTAGTCTTTCCCTTTCAGGGGCCACTTCACCCAAAAACATATTCATTCTCGCTGGCCAGAGCAACATAGCTGGTCGAGGTGGGGTTGAGAAAGATCAATTAGGAAACCTCGTATGGGATAGGTTAGTCCCACCAGAATGTGAACCTCAACCATCAATCCTACGATTGAACCCTGAGCGCTAA

mRNA sequence

ATGGCTCTGTTGAAACTATCAATCATGTTATGTACGATGTTATTTAGTCTTTCCCTTTCAGGGGCCACTTCACCCAAAAACATATTCATTCTCGCTGGCCAGAGCAACATAGCTGGTCGAGGTGGGGTTGAGAAAGATCAATTAGGAAACCTCGTATGGGATAGGTTAGTCCCACCAGAATGTGAACCTCAACCATCAATCCTACGATTGAACCCTGAGCGCTAA

Coding sequence (CDS)

ATGGCTCTGTTGAAACTATCAATCATGTTATGTACGATGTTATTTAGTCTTTCCCTTTCAGGGGCCACTTCACCCAAAAACATATTCATTCTCGCTGGCCAGAGCAACATAGCTGGTCGAGGTGGGGTTGAGAAAGATCAATTAGGAAACCTCGTATGGGATAGGTTAGTCCCACCAGAATGTGAACCTCAACCATCAATCCTACGATTGAACCCTGAGCGCTAA

Protein sequence

MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPECEPQPSILRLNPER
Homology
[Close]
BLAST of MELO3C030746.2 vs. NCBI nr
Match: XP_022158585.1 (probable carbohydrate esterase At4g34215 [Momordica charantia])

HSP 1 Score: 115.9 bits (289), Expect = 5.7e-23
Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          MALL+LSI+LC +L   SLSGATSPKNIFILAGQSN+AGRGGVEKD+ GNLVWD  VPPE
Sbjct: 1  MALLRLSILLCMILCGPSLSGATSPKNIFILAGQSNMAGRGGVEKDRSGNLVWDGYVPPE 60

Query: 61 CEPQPSILRLNPER 75
           +P PSILRLNPER
Sbjct: 61 AQPDPSILRLNPER 74

[Close]
BLAST of MELO3C030746.2 vs. NCBI nr
Match: XP_022131651.1 (probable carbohydrate esterase At4g34215 [Momordica charantia])

HSP 1 Score: 115.5 bits (288), Expect = 7.5e-23
Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          MALL+LSIMLC MLF  SLSGATSPKNIFILAGQSN+AGRGGVEK++ G+L WD  VPPE
Sbjct: 1  MALLRLSIMLCMMLFGPSLSGATSPKNIFILAGQSNMAGRGGVEKNRTGDLEWDGYVPPE 60

Query: 61 CEPQPSILRLNPER 75
           +P PSILRLNPER
Sbjct: 61 SQPDPSILRLNPER 74

[Close]
BLAST of MELO3C030746.2 vs. NCBI nr
Match: XP_022158365.1 (probable carbohydrate esterase At4g34215 [Momordica charantia])

HSP 1 Score: 112.8 bits (281), Expect = 4.8e-22
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          MALL+L I+LC ML   SLSGATSPKNIFILAGQSN+AGRGGVE D+ G+LVWDR VPPE
Sbjct: 1  MALLRLLILLCMMLRGTSLSGATSPKNIFILAGQSNMAGRGGVENDRPGHLVWDRYVPPE 60

Query: 61 CEPQPSILRLNPER 75
           +P PSILRLNP+R
Sbjct: 61 AQPDPSILRLNPDR 74

[Close]
BLAST of MELO3C030746.2 vs. NCBI nr
Match: XP_011649575.1 (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus] >KGN62479.1 hypothetical protein Csa_2G356040 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-22
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          M LL+LSI+LC ML+  SLSGA SPKNIFILAGQSN+AGRGGVE +  GNL WD LVPPE
Sbjct: 1  MVLLRLSIILCVMLYGPSLSGAASPKNIFILAGQSNMAGRGGVENNAQGNLQWDGLVPPE 60

Query: 61 CEPQPSILRLNP 73
          C+PQPSILRLNP
Sbjct: 61 CQPQPSILRLNP 72

[Close]
BLAST of MELO3C030746.2 vs. NCBI nr
Match: XP_011650180.1 (PREDICTED: uncharacterized protein LOC101219489 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-22
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          M LL+LSI+LC ML+  SLSGA SPKNIFILAGQSN+AGRGGVE +  GNL+WD LVPPE
Sbjct: 1  MVLLRLSIILCVMLYGPSLSGAVSPKNIFILAGQSNMAGRGGVENNNKGNLMWDGLVPPE 60

Query: 61 CEPQPSILRLNPER 75
          C+ +PSILRLNP+R
Sbjct: 61 CQSEPSILRLNPDR 74

[Close]
BLAST of MELO3C030746.2 vs. TAIR10
Match: AT4G34215.1 (Domain of unknown function (DUF303) )

HSP 1 Score: 66.2 bits (160), Expect = 9.4e-12
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 25 PKNIFILAGQSNIAGRGGVEKDQLGN-LVWDRLVPPECEPQPSILRLNPE 74
          P  IFIL+GQSN+AGRGGV KD   N  VWD+++PPEC P  SILRL+ +
Sbjct: 21 PNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSAD 70

[Close]
BLAST of MELO3C030746.2 vs. TAIR10
Match: AT3G53010.1 (Domain of unknown function (DUF303) )

HSP 1 Score: 61.6 bits (148), Expect = 2.3e-10
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0 

Query: 27 NIFILAGQSNIAGRGGVEKDQLGN-LVWDRLVPPECEPQPSILRL 71
          +IFILAGQSN+AGRGGV  D   N  VWD ++PPEC   PSILRL
Sbjct: 30 SIFILAGQSNMAGRGGVYNDTATNTTVWDGVIPPECRSNPSILRL 74

[Close]
BLAST of MELO3C030746.2 vs. Swiss-Prot
Match: sp|Q8L9J9|CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-10
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 25 PKNIFILAGQSNIAGRGGVEKDQLGN-LVWDRLVPPECEPQPSILRLNPE 74
          P  IFIL+GQSN+AGRGGV KD   N  VWD+++PPEC P  SILRL+ +
Sbjct: 21 PNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSAD 70

[Close]
BLAST of MELO3C030746.2 vs. TrEMBL
Match: tr|A0A0A0LNC5|A0A0A0LNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356040 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-22
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          M LL+LSI+LC ML+  SLSGA SPKNIFILAGQSN+AGRGGVE +  GNL WD LVPPE
Sbjct: 1  MVLLRLSIILCVMLYGPSLSGAASPKNIFILAGQSNMAGRGGVENNAQGNLQWDGLVPPE 60

Query: 61 CEPQPSILRLNP 73
          C+PQPSILRLNP
Sbjct: 61 CQPQPSILRLNP 72

[Close]
BLAST of MELO3C030746.2 vs. TrEMBL
Match: tr|A0A1S4DVE0|A0A1S4DVE0_CUCME (probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103487864 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          MAL+KLSI+LC MLF  SLSGA SP+NIFIL GQSN+AGRGGVEK+  G   WD ++PP+
Sbjct: 1  MALVKLSILLCAMLFGPSLSGAVSPQNIFILGGQSNMAGRGGVEKNSSGKFEWDGVIPPD 60

Query: 61 CEPQPSILRLNPER 75
          C+P PSILRLN  R
Sbjct: 61 CKPNPSILRLNAAR 74

[Close]
BLAST of MELO3C030746.2 vs. TrEMBL
Match: tr|E5GB85|E5GB85_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 1  MALLKLSIMLCTMLFSLSLSGATSPKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPE 60
          MAL+KLSI+LC MLF  SLSGA SP+NIFIL GQSN+AGRGGVEK+  G   WD ++PP+
Sbjct: 4  MALVKLSILLCAMLFGPSLSGAVSPQNIFILGGQSNMAGRGGVEKNSSGKFEWDGVIPPD 63

Query: 61 CEPQPSILRLNPER 75
          C+P PSILRLN  R
Sbjct: 64 CKPNPSILRLNAAR 77

[Close]
BLAST of MELO3C030746.2 vs. TrEMBL
Match: tr|A0A1S3CSF8|A0A1S3CSF8_CUCME (probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103504372 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-12
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 37 IAGRGGVEKDQLGNLVWDRLVPPECEPQPSILRLNPER 75
          +AGRGGVEKDQ GNLVWDRLVPPECEPQPSILRLNPER
Sbjct: 1  MAGRGGVEKDQSGNLVWDRLVPPECEPQPSILRLNPER 38

[Close]
BLAST of MELO3C030746.2 vs. TrEMBL
Match: tr|A0A218X8I9|A0A218X8I9_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr006722 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.7e-12
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 25 PKNIFILAGQSNIAGRGGVEKDQLGNLVWDRLVPPECEPQPSILRLN 72
          PKNIF+LAGQSN++GRGGV++D+ G L WD +VPPECEP PSI RL+
Sbjct: 6  PKNIFLLAGQSNMSGRGGVKRDKTGYLAWDGVVPPECEPDPSISRLD 52

The following BLAST results are available for this feature:
BLAST of MELO3C030746.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158585.15.7e-2379.73probable carbohydrate esterase At4g34215 [Momordica charantia][more]
XP_022131651.17.5e-2379.73probable carbohydrate esterase At4g34215 [Momordica charantia][more]
XP_022158365.14.8e-2277.03probable carbohydrate esterase At4g34215 [Momordica charantia][more]
XP_011649575.16.3e-2277.78PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus] >KGN62479.... [more]
XP_011650180.16.3e-2274.32PREDICTED: uncharacterized protein LOC101219489 [Cucumis sativus][more]
BLAST of MELO3C030746.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34215.19.4e-1262.00Domain of unknown function (DUF303) [more]
AT3G53010.12.3e-1066.67Domain of unknown function (DUF303) [more]
BLAST of MELO3C030746.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8L9J9|CAES_ARATH1.7e-1062.00Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g... [more]
BLAST of MELO3C030746.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNC5|A0A0A0LNC5_CUCSA4.2e-2277.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356040 PE=4 SV=1[more]
tr|A0A1S4DVE0|A0A1S4DVE0_CUCME1.1e-1968.92probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103487864... [more]
tr|E5GB85|E5GB85_CUCME1.1e-1968.92Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3CSF8|A0A1S3CSF8_CUCME1.3e-1294.74probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103504372... [more]
tr|A0A218X8I9|A0A218X8I9_PUNGR8.7e-1270.21Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr006722 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005181SASA
IPR036514SGNH_hydro_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030746.2.1MELO3C030746.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036514SGNH hydrolase superfamilyGENE3DG3DSA:3.40.50.1110coord: 24..74
e-value: 2.8E-12
score: 48.7
IPR005181Sialate O-acetylesterase domainPFAMPF03629SASAcoord: 26..73
e-value: 1.1E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR31988FAMILY NOT NAMEDcoord: 8..73

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C030746.2Cla002735Watermelon (97103) v1medwmB358
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030746.2Wax gourdmedwgoB405
MELO3C030746.2Cucumber (Gy14) v2cgybmedB194
MELO3C030746.2Cucumber (Gy14) v1cgymedB231
MELO3C030746.2Cucurbita maxima (Rimu)cmamedB545
MELO3C030746.2Cucurbita maxima (Rimu)cmamedB650
MELO3C030746.2Cucurbita moschata (Rifu)cmomedB535
MELO3C030746.2Cucurbita moschata (Rifu)cmomedB638
MELO3C030746.2Cucurbita pepo (Zucchini)cpemedB273
MELO3C030746.2Cucurbita pepo (Zucchini)cpemedB823
MELO3C030746.2Wild cucumber (PI 183967)cpimedB218
MELO3C030746.2Cucumber (Chinese Long) v2cumedB217
MELO3C030746.2Bottle gourd (USVL1VR-Ls)lsimedB372
MELO3C030746.2Watermelon (Charleston Gray)medwcgB342
MELO3C030746.2Silver-seed gourdcarmedB0071
MELO3C030746.2Silver-seed gourdcarmedB0786
MELO3C030746.2Cucumber (Chinese Long) v3cucmedB214
MELO3C030746.2Watermelon (97103) v2medwmbB341