MELO3C030681.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C030681.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	BnaA07g04470D protein
Location	chr04 : 8561221 .. 8563157 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATAAAGTCACTGTCCCACCTAAAAGAGATTGGAAACAAATGGGACATGAAGAGGCAACTGTAGCTGTTCATGAAGAAATGAAACGAGTGCAAAAGTTTCCTTCTAACAGTACCTATGCTACTCATCGTTTGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGGTTTGTATCATGAAACAGAAGCAATCATTTGGTCGGTTTGTGTTAATAATTAATGTAGTAGAAGTAGGGTAATGTGGGCTTTCTTGTTCAAATATTGAGATTAGGATTAGATTCCTTCTAAGAAGTACAAATACGACTGGGATACAACACAATGTTATTTTTTTAAAAAAAAATATCTAGGACATAGATGACAAGACAAAGATCCATAAAATAAAATAAAAAAGATGAATGAAGCACAGCTTTTCATACTTTTATCATAAGTTTTCAGAGATGTAGAAGTTGACTGTATAATTGATTATGATTAACTTGCTGGAGACTATGCTAAGTTTATGTATCACCTATTCATCTTAAGTTTCTCTTCAATGAAGAAATGGATTGCTATTGATGATCCCATTGCTATGCAATTGTTATACGTTTACTCTCCGTTTTCCTATTTTCTTGTTTGTAATTGCAGAGCTTCAAATTCAATTAAACAATTTTCTCTGGGTCCATTTTCAGTTCATGCATTGCTGAATTCATCGCCAAAACAATCATAGTTTAGTTTGTTCCTAAGAGTATATACACCACAATCTTAACGTATGCTGTTTTTTCTCGTGGTTGACATTGGTATATGATATCTGACATATTGTGTTTGTTTGCTCAATTTCTTTTGTCAGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTGGGCTTTCCTTGGGATAAGTTGTAGCTTGAGAATGTCTAGTACAGTTTAACTTCTCTGTACAAATACAACTACAGAATGAAGGGTTGCTAGGATTTTCTTGGTCGCCCTCGACATACCATACCATACCACATACGTTTCTGTATCAATATCCTAAAATGCTTATCATATGCCCTCGAAGGGACAATGTCCTTAATCCTTAAAATAAAATTTGGGTGAACAGTAAATCATTATTATTTGTTGTTATCTTACCTTAATTTCTACTCTCTCTTTCTTCTCCATTTTGCCGCCGCTGTCATCGGTTAGTACAATGTACGTAACTCCTTTCTTTCTCTTTTTTCCACTCAGAATTCGTAAATTTCAACCATCGTATTTCCTTTTTTCCACTCAGAATTCGTAAATTTCAACCATCGTATTTCATTCTCGCTTATAGATAAGTTGTGTAATCTCTGAATTATTATGGTATTGATCCTAACAAAAGAAAGACTATTGCATTCTAAATTATCCACGATTTTTCCTTTGCAATCGCTACTAAATTTTTTTGGGAACTCTACAGTTACAGAGCTATGGAATACGAAGTCTAATTGCCTCAAAAGATCATCGAATTAATGAAAATAAATAGATGATCACATTGCTTATGACTGATTCATTATTAACATTAATAAACAGACGATCACATTGCGACGTTGGATTGGGTTGAGCATAGTTTAACTAACATTAAATTCATATAAAATATTGAACAGAATGTTTTACATTCATAGAAGATTGAAATTTATCCCCAATTTGTATTGTTTCCTTTAAGTATTATTACTATTATTTTAGGTCTAATTAACATCACGAACAAGACAGGACGTTCCATTAATGCTGTGAGTATCGAGACAGAAACACAAAACAAGCAAAAAAGAGAAGCCAAAAGTGATGGAAGTTTGTATACCAGAAAGCTCGATTTGGCTAAGGATATGCCACAACAATATTGCCTACAACGCCGTAATAGCTCATATGTAAAATTCAGTATTTCACACATAAATGATGGAAGCTCGAAATCTACCTACCATTATGACTGA

mRNA sequence

ATGGAAGATAAAGTCACTGTCCCACCTAAAAGAGATTGGAAACAAATGGGACATGAAGAGGCAACTGTAGCTGTTCATGAAGAAATGAAACGAGTGCAAAAGTTTCCTTCTAACAGTACCTATGCTACTCATCGTTTGCGGGTTTGTATCATGAAACAGAAGCAATCATTTGGTCGAGCTTCAAATTCAATTAAACAATTTTCTCTGGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTGGGCTTTCCTTGGGATAAGTTGTAGCTTGAGAATGTCTAGTCTAATTAACATCACGAACAAGACAGGACGTTCCATTAATGCTGTGAGTATCGAGACAGAAACACAAAACAAGCAAAAAAGAGAAGCCAAAAGTGATGGAAGTTTGTATACCAGAAAGCTCGATTTGGCTAAGGATATGCCACAACAATATTGCCTACAACGCCGTAATAGCTCATATGTAAAATTCAGTATTTCACACATAAATGATGGAAGCTCGAAATCTACCTACCATTATGACTGA

Coding sequence (CDS)

ATGGAAGATAAAGTCACTGTCCCACCTAAAAGAGATTGGAAACAAATGGGACATGAAGAGGCAACTGTAGCTGTTCATGAAGAAATGAAACGAGTGCAAAAGTTTCCTTCTAACAGTACCTATGCTACTCATCGTTTGCGGGTTTGTATCATGAAACAGAAGCAATCATTTGGTCGAGCTTCAAATTCAATTAAACAATTTTCTCTGGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTGGGCTTTCCTTGGGATAAGTTGTAGCTTGAGAATGTCTAGTCTAATTAACATCACGAACAAGACAGGACGTTCCATTAATGCTGTGAGTATCGAGACAGAAACACAAAACAAGCAAAAAAGAGAAGCCAAAAGTGATGGAAGTTTGTATACCAGAAAGCTCGATTTGGCTAAGGATATGCCACAACAATATTGCCTACAACGCCGTAATAGCTCATATGTAAAATTCAGTATTTCACACATAAATGATGGAAGCTCGAAATCTACCTACCATTATGACTGA

Protein sequence

MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRVCIMKQKQSFGRASNSIKQFSLENCISGRGTGVAVFWAFLGISCSLRMSSLINITNKTGRSINAVSIETETQNKQKREAKSDGSLYTRKLDLAKDMPQQYCLQRRNSSYVKFSISHINDGSSKSTYHYD

Homology

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BLAST of MELO3C030681.2 vs. NCBI nr
Match: XP_004150100.1 (PREDICTED: uncharacterized protein LOC101214758 [Cucumis sativus] >XP_004150101.1 PREDICTED: uncharacterized protein LOC101214758 [Cucumis sativus] >XP_011652381.1 PREDICTED: uncharacterized protein LOC101214758 [Cucumis sativus] >KGN59879.1 hypothetical protein Csa_3G851790 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          MEDKV VP KRDWKQMGHE ATVAVHEEMKRVQ+FPSNSTYATHRLR+
Sbjct: 1  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRI 48

[Close]

BLAST of MELO3C030681.2 vs. NCBI nr
Match: XP_022139403.1 (uncharacterized protein LOC111010342 [Momordica charantia] >XP_022139404.1 uncharacterized protein LOC111010342 [Momordica charantia])

HSP 1 Score: 80.5 bits (197), Expect = 6.3e-12
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          ME KV+ PPK +WKQMGHEE TV VH+EMKRVQ+ PSNS YATHR RV
Sbjct: 1  MESKVSAPPKNNWKQMGHEETTVTVHQEMKRVQQLPSNSAYATHRFRV 48

[Close]

BLAST of MELO3C030681.2 vs. NCBI nr
Match: XP_023535148.1 (uncharacterized protein LOC111796661 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 73.6 bits (179), Expect = 7.7e-10
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          ME KV+V PK D KQMGH+EA V V EEMKRVQ+ PSNSTYATHR+RV
Sbjct: 1  MEGKVSVLPKNDGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRMRV 48

[Close]

BLAST of MELO3C030681.2 vs. NCBI nr
Match: XP_022935764.1 (uncharacterized protein LOC111442587 [Cucurbita moschata] >XP_022976616.1 uncharacterized protein LOC111476958 [Cucurbita maxima])

HSP 1 Score: 73.2 bits (178), Expect = 1.0e-09
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          ME KV+V PK + KQMGH+EA V V EEMKRVQ+ PSNSTYATHRLRV
Sbjct: 1  MEGKVSVSPKNNGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRLRV 48

[Close]

BLAST of MELO3C030681.2 vs. NCBI nr
Match: XP_008454637.1 (PREDICTED: uncharacterized protein LOC103494999 [Cucumis melo] >XP_008454638.1 PREDICTED: uncharacterized protein LOC103494999 [Cucumis melo] >XP_008454639.1 PREDICTED: uncharacterized protein LOC103494999 [Cucumis melo] >XP_008454640.1 PREDICTED: uncharacterized protein LOC103494999 [Cucumis melo] >XP_008454641.1 PREDICTED: uncharacterized protein LOC103494999 [Cucumis melo] >XP_008454642.1 PREDICTED: uncharacterized protein LOC103494999 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 16 MGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          MGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV
Sbjct: 1  MGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 33

[Close]

BLAST of MELO3C030681.2 vs. TAIR10
Match: AT3G13677.1 (unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 0


Query: 13 WKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRVCIMKQKQSFGRASNSIKQ-FSLEN 72
          W +M  +E +  + EE+KRV K PSNS YA HRL+V             N I    S++N
Sbjct: 12 WNEMDCDEKSSVIQEEIKRVCKLPSNSVYAVHRLKVL------------NKINDLLSVQN 71

Query: 73 CISGRGTGVAVFWAFL 88
           +S  G G+A+  A L
Sbjct: 72 IVSREGVGIAIHTALL 75

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BLAST of MELO3C030681.2 vs. TrEMBL
Match: tr|A0A0A0LFX0|A0A0A0LFX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851790 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          MEDKV VP KRDWKQMGHE ATVAVHEEMKRVQ+FPSNSTYATHRLR+
Sbjct: 1  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRI 48

[Close]

BLAST of MELO3C030681.2 vs. TrEMBL
Match: tr|A0A1S3BYM9|A0A1S3BYM9_CUCME (uncharacterized protein LOC103494999 OS=Cucumis melo OX=3656 GN=LOC103494999 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.4e-09
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 16 MGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          MGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV
Sbjct: 1  MGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 33

[Close]

BLAST of MELO3C030681.2 vs. TrEMBL
Match: tr|A0A251PMU3|A0A251PMU3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G189600 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.3e-07
Identity = 30/48 (62.50%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          MED     PK  WK+MG  E   +VHEEMKR+QK P+NSTY THRLRV
Sbjct: 44 MEDSCGARPKATWKKMGPVEKEASVHEEMKRMQKLPANSTYVTHRLRV 91

[Close]

BLAST of MELO3C030681.2 vs. TrEMBL
Match: tr|A0A1U8KV91|A0A1U8KV91_GOSHI (uncharacterized protein LOC107919984 OS=Gossypium hirsutum OX=3635 GN=LOC107919984 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          +ED     P+  WKQMG+EE TVAVHEEMKR+ + P+ S+Y THR+RV
Sbjct: 18 IEDAGATNPRVQWKQMGYEEKTVAVHEEMKRMNRLPATSSYVTHRMRV 65

[Close]

BLAST of MELO3C030681.2 vs. TrEMBL
Match: tr|A0A1U8II75|A0A1U8II75_GOSHI (uncharacterized protein LOC107895293 OS=Gossypium hirsutum OX=3635 GN=LOC107895293 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRV 49
          MED     P+  WKQMG+EE TVAVHEEMKR+ + P+ S+Y THR+RV
Sbjct: 47 MEDAGATNPRVLWKQMGYEEKTVAVHEEMKRMNRLPATSSYVTHRMRV 94

The following BLAST results are available for this feature:

BLAST of MELO3C030681.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150100.1	2.7e-15	89.58	PREDICTED: uncharacterized protein LOC101214758 [Cucumis sativus] >XP_004150101....	[more]
XP_022139403.1	6.3e-12	75.00	uncharacterized protein LOC111010342 [Momordica charantia] >XP_022139404.1 uncha...	[more]
XP_023535148.1	7.7e-10	75.00	uncharacterized protein LOC111796661 [Cucurbita pepo subsp. pepo]	[more]
XP_022935764.1	1.0e-09	75.00	uncharacterized protein LOC111442587 [Cucurbita moschata] >XP_022976616.1 unchar...	[more]
XP_008454637.1	1.1e-08	100.00	PREDICTED: uncharacterized protein LOC103494999 [Cucumis melo] >XP_008454638.1 P...	[more]

BLAST of MELO3C030681.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13677.1	1.3e-06	38.16	unknown protein	[more]

BLAST of MELO3C030681.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C030681.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFX0\|A0A0A0LFX0_CUCSA	1.8e-15	89.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851790 PE=4 SV=1	[more]
tr\|A0A1S3BYM9\|A0A1S3BYM9_CUCME	7.4e-09	100.00	uncharacterized protein LOC103494999 OS=Cucumis melo OX=3656 GN=LOC103494999 PE=...	[more]
tr\|A0A251PMU3\|A0A251PMU3_PRUPE	5.3e-07	62.50	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G189600 PE=4 SV=1	[more]
tr\|A0A1U8KV91\|A0A1U8KV91_GOSHI	6.9e-07	58.33	uncharacterized protein LOC107919984 OS=Gossypium hirsutum OX=3635 GN=LOC1079199...	[more]
tr\|A0A1U8II75\|A0A1U8II75_GOSHI	6.9e-07	60.42	uncharacterized protein LOC107895293 OS=Gossypium hirsutum OX=3635 GN=LOC1078952...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030681.2.1	MELO3C030681.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36754	FAMILY NOT NAMED	coord: 9..48

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C030681.2	CmaCh09G008930	Cucurbita maxima (Rimu)	cmamedB032
MELO3C030681.2	Lsi04G012830	Bottle gourd (USVL1VR-Ls)	lsimedB326
MELO3C030681.2	Cp4.1LG06g07120	Cucurbita pepo (Zucchini)	cpemedB860
MELO3C030681.2	Bhi09G001688	Wax gourd	medwgoB438
MELO3C030681.2	Carg12764	Silver-seed gourd	carmedB0898

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C030681.2	Cucumber (Gy14) v2	cgybmedB186
MELO3C030681.2	Cucumber (Gy14) v1	cgymedB560
MELO3C030681.2	Cucurbita maxima (Rimu)	cmamedB491
MELO3C030681.2	Cucurbita moschata (Rifu)	cmomedB021
MELO3C030681.2	Cucurbita moschata (Rifu)	cmomedB478
MELO3C030681.2	Cucurbita pepo (Zucchini)	cpemedB617
MELO3C030681.2	Wild cucumber (PI 183967)	cpimedB209
MELO3C030681.2	Cucumber (Chinese Long) v2	cumedB208
MELO3C030681.2	Watermelon (Charleston Gray)	medwcgB314
MELO3C030681.2	Watermelon (97103) v1	medwmB378
MELO3C030681.2	Cucumber (Chinese Long) v3	cucmedB212
MELO3C030681.2	Watermelon (97103) v2	medwmbB310