MELO3C030657.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030657.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUlp1 protease family, carboxy-terminal domain protein
Locationchr04 : 7794743 .. 7796536 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTCACAACGAATGTGGTTAAAGAGGAGGTGAATGTGGATGTGATTATTCTGAATGATGAACATGGGGATGCTACCGAGGTAATTAATGAATTTTGGGACAACTTGATGCATGAGTTTCTATAAGTCTTATAAAGTTTAATAATGTTGGATTTATGACTTTGTTAGGTTCGTAATGAAAAAGAAGTTGTATGTGGGTCCTATATCAACATGCCACTATCTTTGAAGACAATACTCAGATTTGCTGAAAAGGTAATGGACAAAGATTCAAGGATTCGTTACCACCTACCATTCTCGTTGTTTGGTATCGGTAGGAAGACTTGTGTTCTTTGAGAATATATTATTGATTTTTATAACATGGGAGAAGTCAAGACTTTAACATTGGTTGCATATATGGCGTAAGTACTCATTGACCCACTTCAATCTTTTTATATAAATACTTGTTTATTGACTTTTCTATCTTTCTTAGATATTTGCATTCACAAGATCATCTTCGTTGACCCGTCCCTTATATATGTTGGACATAACACCCAAGAAATTAGAGCTCACAATCTGTGCAGTAGATTAATGACTTCAAAACAAAACCAACTCGTTTTGGCTCCATTCAATCCAGGGTAAGTAATACTATACTAATCAATTCATTAAAAAAAGCTATAAATGATTTGCTTCTTTGAATTGAACCTCTTCTTTCTATTCATCATTTGGGCAAATTGTAGAATCTAGTTGTCGTCTTCTTTTGATTTTGCGTAGAGAAATTGGTTTGTAGGCATCTTGGTTATTTGCGTTATTTAGGTAGAGAAACAAGTTTTATGAAATTAAGtTATATGAAAATAGTCTACTTGTATTCTTTCTATGTAGTAGTCATTGGACTCTTCTGGCTATTAACGCATACAATAAGATAGTCTATTATCTTGACTCACTTCGAACAACATCAAGAGTAGATATTAGATATGTAACTGACATGTAAGTAAGCTTCTTTCATATATGATGTTTTCCATCTTAAAGTTCACTTCATTATAACGCGTAGTTGTTTCTTGGCAATAAGGCTATTACTATCTTCCAGCTCAAAAAATATTCAAACAAGTAATAAACATCCAATATGGAAAACACTGAAAGTAAATATACACATATTTATTCATTAACATGTGATTGTTTCTTGGCAATATGAATTATATTGGGTATTATGTGATTTTTTCTTGGCAATATGCATTATATTGAATACTATGTGGATGTTTCTTGTCAATATCCATTATATTGGGTACTATGTGATTGTTTCTTGGCAATATGCATTATATTCGGTACTATGTGGTTGTTTCTTCGCAATATGTACTATATTGCGTACTATGTGGTTGTTTTTTTGGCAATATGCATTATATTGGGTACCATGTGATTGTTTCTTGGCAATATGCACTACATTTCGTACTACGTGGTTGTTTCTTGCCAATATGCACTACATTTCGTACTATGTGGTTGTTTCTTGGCAATATGCATTATATTGGGTACCATGTGATTGTTTCTTCGCAATATGCATTATATTGAATACTATGTGGTTGTTTCTTGGCAATATGCACTACATTTCGTACTATGTGGTTGTTTCTTGGCAATATGCATTATATTGGGTGCCATGTGATTGTTTCTTCGCAATATGCATTATATTGAATACTATGTGGTTGTTTCTTAGCAATATGTATTATATTGGGTACTATGTATTTACAGTGTCCTTTACAAGCTGGAGTAGTTGAATGTGGGTACTATGTGATGAGTTACATGAGAGATATAATCACAAATTAG

mRNA sequence

ATGAATGTCACAACGAATGTGGTTAAAGAGGAGGTGAATGTGGATGTGATTATTCTGAATGATGAACATGGGGATGCTACCGAGGTTCGTAATGAAAAAGAAGTTGTATGTGGGTCCTATATCAACATGCCACTATCTTTGAAGACAATACTCAGATTTGCTGAAAAGTGTCCTTTACAAGCTGGAGTAGTTGAATGTGGGTACTATGTGATGAGTTACATGAGAGATATAATCACAAATTAG

Coding sequence (CDS)

ATGAATGTCACAACGAATGTGGTTAAAGAGGAGGTGAATGTGGATGTGATTATTCTGAATGATGAACATGGGGATGCTACCGAGGTTCGTAATGAAAAAGAAGTTGTATGTGGGTCCTATATCAACATGCCACTATCTTTGAAGACAATACTCAGATTTGCTGAAAAGTGTCCTTTACAAGCTGGAGTAGTTGAATGTGGGTACTATGTGATGAGTTACATGAGAGATATAATCACAAATTAG

Protein sequence

MNVTTNVVKEEVNVDVIILNDEHGDATEVRNEKEVVCGSYINMPLSLKTILRFAEKCPLQAGVVECGYYVMSYMRDIITN
Homology
[Close]
BLAST of MELO3C030657.2 vs. NCBI nr
Match: ADN33894.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-10
Identity = 42/80 (52.50%), Postives = 45/80 (56.25%), Query Frame = 0 

Query: 1  MNVTTNVVKEEVNVDVIILNDEHGDATEVRNEKEVVCGSYINMPLSLKTILRFAEKCPLQ 60
          MNVT  VVK++ NVDVIILND+H DATE                            C LQ
Sbjct: 1  MNVTMKVVKDDANVDVIILNDQHDDATE----------------------------CHLQ 52

Query: 61 AGVVECGYYVMSYMRDIITN 81
           GVVECGYYVM YMRDIITN
Sbjct: 61 VGVVECGYYVMRYMRDIITN 52

[Close]
BLAST of MELO3C030657.2 vs. TrEMBL
Match: tr|E5GBQ2|E5GBQ2_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-10
Identity = 42/80 (52.50%), Postives = 45/80 (56.25%), Query Frame = 0 

Query: 1  MNVTTNVVKEEVNVDVIILNDEHGDATEVRNEKEVVCGSYINMPLSLKTILRFAEKCPLQ 60
          MNVT  VVK++ NVDVIILND+H DATE                            C LQ
Sbjct: 1  MNVTMKVVKDDANVDVIILNDQHDDATE----------------------------CHLQ 52

Query: 61 AGVVECGYYVMSYMRDIITN 81
           GVVECGYYVM YMRDIITN
Sbjct: 61 VGVVECGYYVMRYMRDIITN 52

The following BLAST results are available for this feature:
BLAST of MELO3C030657.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33894.13.5e-1052.50hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C030657.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030657.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030657.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GBQ2|E5GBQ2_CUCME2.3e-1052.50Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030657.2.1MELO3C030657.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030657.2Wax gourdmedwgoB438
MELO3C030657.2Cucumber (Gy14) v2cgybmedB186
MELO3C030657.2Cucumber (Gy14) v1cgymedB560
MELO3C030657.2Cucurbita maxima (Rimu)cmamedB032
MELO3C030657.2Cucurbita maxima (Rimu)cmamedB491
MELO3C030657.2Cucurbita moschata (Rifu)cmomedB021
MELO3C030657.2Cucurbita moschata (Rifu)cmomedB478
MELO3C030657.2Cucurbita pepo (Zucchini)cpemedB617
MELO3C030657.2Cucurbita pepo (Zucchini)cpemedB860
MELO3C030657.2Wild cucumber (PI 183967)cpimedB209
MELO3C030657.2Cucumber (Chinese Long) v2cumedB208
MELO3C030657.2Bottle gourd (USVL1VR-Ls)lsimedB326
MELO3C030657.2Watermelon (Charleston Gray)medwcgB314
MELO3C030657.2Watermelon (97103) v1medwmB378
MELO3C030657.2Silver-seed gourdcarmedB0321
MELO3C030657.2Silver-seed gourdcarmedB0898
MELO3C030657.2Cucumber (Chinese Long) v3cucmedB212
MELO3C030657.2Watermelon (97103) v2medwmbB310