MELO3C030630.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030630.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr04 : 7342509 .. 7343569 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATATTCTTGCACAATGAATAAATCGCTTCCTTTGAAGATTGTGCAAAAATGGAGAAATCTCCATTATCTCTAATATAATGAGATAAATCAAATTTTTTAAGATTGTGAACAACACTCCATTCCTTCATTTTCTCGAAATTCTTCCGTTTTCTTCTGTTTTGTAAAATATATATACATACATACATATATATATATATATATTGGCCCCAAGTTTTCATAAAAATGTGGAGGAAGAAATTGCGAGTAGCCAAGTTGATTGTGATGGAATTGGAAAAAAAGGATGTTGATTGGATGGAGGCCAGATTGGGAAGTTTTGATGTTGGGATTGGAAAAAAATTCCCACATTTGGCTCTTTTGGGTTCTTCAATTTGGTGAAATCCAGAGATGATGTTTGAAAGCATTGAAGACGATGGGAATCCATCTACATCTGAGGTATGTTTGAGAATTTCTCTGTTTTTTATACTCTATATTTCATCTTTTTATTGAGCTTAAATTCTTTATATGGGTTTCCGTCTTCAATGCTTGATTTATTTGATTCTTTTGGTTTTTGAGCAAATTTAAGAACTGGGTTTTGCTTAATTTCCATAGATATATGAGATCTTGGTTGTTCATCTTCCTTCTCTCTTTTTATCAAACATCATCTCCATCACTTTTTCCTTAATTTCTCTCACCTTTTTTCATTCTGGTTTACAAAGAAGAAGGAAAACTAAAATTTCATTTTGTTAAACAATATTAATTAATGGCAAAACAAATGCTAGAAAACGACATTTGTGTTTGATTGACTGCATGCACAACACCAACAAGAGATAAATAATTACTCAACAACTAACATTAATTTTCTTTTTTAAAGAAAAGTAGGGTCGTTCATTCAAGGCTATAAGTATGCCACGTATAGGGTCGTTCATTCAAGGCCATCAGTACGCCACGCTTTCTCTTCTCTTCTCTTTTCATTTTTTTCTCCACAGTGGAGAAGGGGGTAACCATTCTGATCCTATAAACGGCGACTGCATTGCTTTATCACATCCATCCGTCTTAGTCCGATTATCGATCCTGAATTGA

mRNA sequence

GAATATTCTTGCACAATGAATAAATCGCTTCCTTTGAAGATTGTGCAAAAATGGAGAAATCTCCATTATCTCTAATATAATGAGATAAATCAAATTTTTTAAGATTGTGAACAACACTCCATTCCTTCATTTTCTCGAAATTCTTCCGTTTTCTTCTGTTTTGTAAAATATATATACATACATACATATATATATATATATATTGGCCCCAAGTTTTCATAAAAATGTGGAGGAAGAAATTGCGAGTAGCCAAGTTGATTGTGATGGAATTGGAAAAAAAGGATGTTGATTGGATGGAGGCCAGATTGGGAAGTTTTGATGTTGGGATTGGAAAAAAATTCCCACATTTGGCTCTTTTGGGTTCTTCAATTTGGTGAAATCCAGAGATGATGTTTGAAAGCATTGAAGACGATGGGAATCCATCTACATCTGAGGGTCGTTCATTCAAGGCTATAAGTATGCCACGTATAGGGTCGTTCATTCAAGGCCATCAGTACGCCACGCTTTCTCTTCTCTTCTCTTTTCATTTTTTTCTCCACAGTGGAGAAGGGGGTAACCATTCTGATCCTATAAACGGCGACTGCATTGCTTTATCACATCCATCCGTCTTAGTCCGATTATCGATCCTGAATTGA

Coding sequence (CDS)

ATGATGTTTGAAAGCATTGAAGACGATGGGAATCCATCTACATCTGAGGGTCGTTCATTCAAGGCTATAAGTATGCCACGTATAGGGTCGTTCATTCAAGGCCATCAGTACGCCACGCTTTCTCTTCTCTTCTCTTTTCATTTTTTTCTCCACAGTGGAGAAGGGGGTAACCATTCTGATCCTATAAACGGCGACTGCATTGCTTTATCACATCCATCCGTCTTAGTCCGATTATCGATCCTGAATTGA

Protein sequence

MMFESIEDDGNPSTSEGRSFKAISMPRIGSFIQGHQYATLSLLFSFHFFLHSGEGGNHSDPINGDCIALSHPSVLVRLSILN
Homology
[Close]
BLAST of MELO3C030630.2 vs. NCBI nr
Match: XP_004147805.2 (PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus] >KGN59907.1 hypothetical protein Csa_3G852560 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-14
Identity = 47/56 (83.93%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 25 MPRIGSFIQGHQYATLSLLFSFHFFLHSGEGGNHSDPINGDCIALSHPSVLVRLSI 81
          MPR  SFIQGH YATLS LFSFHFF  SGEGG HSDPIN DCIALSH SVLVRLSI
Sbjct: 1  MPR--SFIQGHHYATLS-LFSFHFFSTSGEGGYHSDPINVDCIALSHSSVLVRLSI 53

[Close]
BLAST of MELO3C030630.2 vs. TrEMBL
Match: tr|A0A0A0LGF0|A0A0A0LGF0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852560 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-14
Identity = 47/56 (83.93%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 25 MPRIGSFIQGHQYATLSLLFSFHFFLHSGEGGNHSDPINGDCIALSHPSVLVRLSI 81
          MPR  SFIQGH YATLS LFSFHFF  SGEGG HSDPIN DCIALSH SVLVRLSI
Sbjct: 1  MPR--SFIQGHHYATLS-LFSFHFFSTSGEGGYHSDPINVDCIALSHSSVLVRLSI 53

The following BLAST results are available for this feature:
BLAST of MELO3C030630.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147805.24.1e-1483.93PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus] >KGN59907.1 hypotheti... [more]
BLAST of MELO3C030630.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030630.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030630.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LGF0|A0A0A0LGF0_CUCSA2.7e-1483.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852560 PE=3 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030630.2.1MELO3C030630.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030630.2Cucumber (Gy14) v2cgybmedB186
MELO3C030630.2Cucumber (Gy14) v1cgymedB560
MELO3C030630.2Cucurbita maxima (Rimu)cmamedB031
MELO3C030630.2Cucurbita maxima (Rimu)cmamedB487
MELO3C030630.2Cucurbita moschata (Rifu)cmomedB020
MELO3C030630.2Cucurbita moschata (Rifu)cmomedB474
MELO3C030630.2Cucurbita pepo (Zucchini)cpemedB859
MELO3C030630.2Wild cucumber (PI 183967)cpimedB209
MELO3C030630.2Cucumber (Chinese Long) v2cumedB208
MELO3C030630.2Bottle gourd (USVL1VR-Ls)lsimedB325
MELO3C030630.2Watermelon (Charleston Gray)medwcgB325
MELO3C030630.2Watermelon (97103) v1medwmB364
MELO3C030630.2Cucumber (Chinese Long) v3cucmedB212
MELO3C030630.2Watermelon (97103) v2medwmbB319
MELO3C030630.2Wax gourdmedwgoB438