MELO3C030526.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C030526.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ATP-dependent RNA helicase, putative
Location	chr04 : 14263533 .. 14263964 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGTCTCGTTTTTTTAGAACTCAAGGACATAATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGCCTCTTGAAAAAGGTATGAAATCATTGATCCGGACCAAATATATCTTTCAATAACTTGGCAACTTAAGCATTATGTAATTGTATTGATTATGTATTCCAGATTCAACGGCGACGATCCGATCTGCGATTGATTATCTCTTCTACTATAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAAGTTATATTTTTTATTATTATTACTATTGTTTGAAACTGAACTCATTATGGTTTTAAGTCTCTGTTTCTTATCAAAAAAGAGAAAAAAAAAAGCCCtGAAATAGAGGAGTAAAACATGTAGACTATTTAAGGAAAAAAACCTTGGTGTGAAGGTTAAAGTTTGA

mRNA sequence

TGTGGTCTCGTTTTTTTAGAACTCAAGGACATAATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGCCTCTTGAAAAAGATTCAACGGCGACGATCCGATCTGCGATTGATTATCTCTTCTACTATAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAAGTTATATTTTTTATTATTATTACTATTGTTTGAAACTGAACTCATTATGGTTTTAAGTCTCTGTTTCTTATCAAAAAAGAGAAAAAAAAAAGCCCtGAAATAGAGGAGTAAAACATGTAGACTATTTAAGGAAAAAAACCTTGGTGTGAAGGTTAAAGTTTGA

Coding sequence (CDS)

ATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGCCTCTTGAAAAAGATTCAACGGCGACGATCCGATCTGCGATTGATTATCTCTTCTACTATAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAAGTTATATTTTTTATTATTATTACTATTGTTTGAAACTGAACTCATTATGGTTTTAAGTCTCTGTTTCTTATCAAAAAAGAGAAAAAAAAAAGCCCtGAAATAG

Protein sequence

MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQMKLYFLLLLLLFETELIMVLSLCFLSKKRKKKALK

Homology

[Close]

BLAST of MELO3C030526.2 vs. NCBI nr
Match: XP_004148780.1 (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Cucumis sativus] >KGN64712.1 hypothetical protein Csa_1G077130 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
           MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 168 MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 216

[Close]

BLAST of MELO3C030526.2 vs. NCBI nr
Match: XP_008442967.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
           MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 167 MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 215

[Close]

BLAST of MELO3C030526.2 vs. NCBI nr
Match: XP_008442975.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2 [Cucumis melo] >XP_016900087.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
           MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 71  MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 119

[Close]

BLAST of MELO3C030526.2 vs. NCBI nr
Match: XP_008442984.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X3 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1  MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
          MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 51 MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 99

[Close]

BLAST of MELO3C030526.2 vs. NCBI nr
Match: XP_016902463.1 (PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902464.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902465.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902466.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902467.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902468.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902469.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902470.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1  MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
          MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 1  MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 49

[Close]

BLAST of MELO3C030526.2 vs. TAIR10
Match: AT4G18465.1 (RNA helicase family protein)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-14
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           M+DEAHERSISTD+LLGLLKKIQRRR +LRLIISS  IEAK+MS FF
Sbjct: 168 MIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFF 214

[Close]

BLAST of MELO3C030526.2 vs. TAIR10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-09
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           M+DEAHER+I TD+L GLLKK+ +RR DLRLI++S  ++A+  S +F
Sbjct: 633 MLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYF 679

[Close]

BLAST of MELO3C030526.2 vs. TAIR10
Match: AT5G10370.1 (helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related)

HSP 1 Score: 57.4 bits (137), Expect = 4.9e-09
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           ++DEAHERS++TD+LL LLKK+  RR DLRL+I S   +AK +S +F
Sbjct: 425 IIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYF 471

[Close]

BLAST of MELO3C030526.2 vs. TAIR10
Match: AT4G16680.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-08
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           ++DEAHER++STD+L  L+K + + R DLRLIISS  +EAK  S +F
Sbjct: 333 IIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYF 379

[Close]

BLAST of MELO3C030526.2 vs. TAIR10
Match: AT5G13010.1 (RNA helicase family protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-08
Identity = 24/47 (51.06%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           ++DEAHERS++TD+L G+LKK+  RR D +LI++S  + A+  S FF
Sbjct: 676 VMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFF 722

[Close]

BLAST of MELO3C030526.2 vs. Swiss-Prot
Match: sp|F4JRJ6|DEAH9_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana OX=3702 GN=At4g18465 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-13
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           M+DEAHERSISTD+LLGLLKKIQRRR +LRLIISS  IEAK+MS FF
Sbjct: 168 MIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFF 214

[Close]

BLAST of MELO3C030526.2 vs. Swiss-Prot
Match: sp|Q9BKQ8|DHX35_CAEEL (Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans OX=6239 GN=ddx-35 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.3e-08
Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
           M+DEAHERS +TD+LLGLL+KI + R+DLR+I+SS  ++A+    FF+M
Sbjct: 196 MIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEM 244

[Close]

BLAST of MELO3C030526.2 vs. Swiss-Prot
Match: sp|Q38953|DEAH5_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 4.0e-08
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           M+DEAHER+I TD+L GLLKK+ +RR DLRLI++S  ++A+  S +F
Sbjct: 633 MLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYF 679

[Close]

BLAST of MELO3C030526.2 vs. Swiss-Prot
Match: sp|F4KGU4|DEAHC_ARATH (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10370 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.9e-08
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           ++DEAHERS++TD+LL LLKK+  RR DLRL+I S   +AK +S +F
Sbjct: 425 IIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYF 471

[Close]

BLAST of MELO3C030526.2 vs. Swiss-Prot
Match: sp|Q9H5Z1|DHX35_HUMAN (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens OX=9606 GN=DHX35 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 8.9e-08
Identity = 26/47 (55.32%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFF 48
           M+DEAHER++ TD+ +GLLKKIQ++R DLRLI++S  ++A     FF
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFF 220

[Close]

BLAST of MELO3C030526.2 vs. TrEMBL
Match: tr|A0A1S3B7Q6|A0A1S3B7Q6_CUCME (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486709 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
           MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 71  MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 119

[Close]

BLAST of MELO3C030526.2 vs. TrEMBL
Match: tr|A0A1S4E2L5|A0A1S4E2L5_CUCME (putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Cucumis melo OX=3656 GN=LOC103498775 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1  MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
          MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 1  MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 49

[Close]

BLAST of MELO3C030526.2 vs. TrEMBL
Match: tr|A0A1S3B6Y9|A0A1S3B6Y9_CUCME (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486709 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
           MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 167 MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 215

[Close]

BLAST of MELO3C030526.2 vs. TrEMBL
Match: tr|A0A1S3B6I3|A0A1S3B6I3_CUCME (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486709 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1  MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
          MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 51 MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 99

[Close]

BLAST of MELO3C030526.2 vs. TrEMBL
Match: tr|A0A0A0LV75|A0A0A0LV75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077130 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-14
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKIQRRRSDLRLIISSTIIEAKSMSTFFQM 50
           MVDEAHERSISTDMLLGLLKKIQRRR DLRLIISS  IEAKSMSTFFQM
Sbjct: 168 MVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQM 216

The following BLAST results are available for this feature:

BLAST of MELO3C030526.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148780.1	5.4e-14	93.88	PREDICTED: probable ATP-dependent RNA helicase DHX35 [Cucumis sativus] >KGN64712...	[more]
XP_008442967.1	5.4e-14	93.88	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 is...	[more]
XP_008442975.1	5.4e-14	93.88	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 is...	[more]
XP_008442984.1	5.4e-14	93.88	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 is...	[more]
XP_016902463.1	5.4e-14	93.88	PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09...	[more]

BLAST of MELO3C030526.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18465.1	1.3e-14	82.98	RNA helicase family protein	[more]
AT3G26560.1	2.2e-09	57.45	ATP-dependent RNA helicase, putative	[more]
AT5G10370.1	4.9e-09	57.45	helicase domain-containing protein / IBR domain-containing protein / zinc finger...	[more]
AT4G16680.1	2.4e-08	55.32	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G13010.1	3.2e-08	51.06	RNA helicase family protein	[more]

BLAST of MELO3C030526.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JRJ6\|DEAH9_ARATH	2.4e-13	82.98	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsi...	[more]
sp\|Q9BKQ8\|DHX35_CAEEL	2.3e-08	57.14	Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans OX=6...	[more]
sp\|Q38953\|DEAH5_ARATH	4.0e-08	57.45	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi...	[more]
sp\|F4KGU4\|DEAHC_ARATH	8.9e-08	57.45	ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9H5Z1\|DHX35_HUMAN	8.9e-08	55.32	Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens OX=9606 GN=DHX35 PE=1 ...	[more]

BLAST of MELO3C030526.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7Q6\|A0A1S3B7Q6_CUCME	3.6e-14	93.88	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2 OS...	[more]
tr\|A0A1S4E2L5\|A0A1S4E2L5_CUCME	3.6e-14	93.88	putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Cucumis...	[more]
tr\|A0A1S3B6Y9\|A0A1S3B6Y9_CUCME	3.6e-14	93.88	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 OS...	[more]
tr\|A0A1S3B6I3\|A0A1S3B6I3_CUCME	3.6e-14	93.88	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X3 OS...	[more]
tr\|A0A0A0LV75\|A0A0A0LV75_CUCSA	3.6e-14	93.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077130 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030526.2.1	MELO3C030526.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..53 e-value: 5.1E-15 score: 57.2
None	No IPR available	PANTHER	PTHR18934:SF136	ATP-DEPENDENT RNA HELICASE DHX35-RELATED	coord: 1..50
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 1..50

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C030526.2	Cucumber (Gy14) v2	cgybmedB177
MELO3C030526.2	Cucumber (Gy14) v2	cgybmedB184
MELO3C030526.2	Cucumber (Gy14) v1	cgymedB034
MELO3C030526.2	Cucumber (Gy14) v1	cgymedB428
MELO3C030526.2	Cucurbita maxima (Rimu)	cmamedB545
MELO3C030526.2	Cucurbita maxima (Rimu)	cmamedB648
MELO3C030526.2	Cucurbita moschata (Rifu)	cmomedB532
MELO3C030526.2	Cucurbita moschata (Rifu)	cmomedB636
MELO3C030526.2	Cucurbita pepo (Zucchini)	cpemedB270
MELO3C030526.2	Cucurbita pepo (Zucchini)	cpemedB822
MELO3C030526.2	Wild cucumber (PI 183967)	cpimedB199
MELO3C030526.2	Wild cucumber (PI 183967)	cpimedB204
MELO3C030526.2	Cucumber (Chinese Long) v2	cumedB198
MELO3C030526.2	Cucumber (Chinese Long) v2	cumedB205
MELO3C030526.2	Melon (DHL92) v3.6.1	medmedB135
MELO3C030526.2	Bottle gourd (USVL1VR-Ls)	lsimedB370
MELO3C030526.2	Bottle gourd (USVL1VR-Ls)	lsimedB373
MELO3C030526.2	Watermelon (Charleston Gray)	medwcgB342
MELO3C030526.2	Watermelon (97103) v1	medwmB355
MELO3C030526.2	Watermelon (97103) v1	medwmB367
MELO3C030526.2	Silver-seed gourd	carmedB0757
MELO3C030526.2	Silver-seed gourd	carmedB0785
MELO3C030526.2	Cucumber (Chinese Long) v3	cucmedB203
MELO3C030526.2	Cucumber (Chinese Long) v3	cucmedB209
MELO3C030526.2	Watermelon (97103) v2	medwmbB323
MELO3C030526.2	Watermelon (97103) v2	medwmbB337
MELO3C030526.2	Wax gourd	medwgoB402