MELO3C030425.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030425.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionZf-CCHC domain-containing protein/MP domain-containing protein
Locationchr04 : 7354091 .. 7354477 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTCTAAATACGATCAGCTATGATTCTCAAAAAATTCTTCCTGTCAAGGTTTACAACATTGATATGAAGAATCACTACCAAAGGCCATCACCACCAGATCTAGGATGGGATGACTTACACTCAGATTTTCGATCTTTTAATGGAAATAATATCGAAACTTGGAACAGTGACGAATGTTCTAAAGGGCAGATGATGATCATTTTTCAAGAAATGTTTGTTGCTACAATAAGCTATCTTAGGAGAATGTGTCAAAGAGAAATTATCGATGCCTTAACTGCAAGGTTTACAGGAAACCTCAGAAGTTGGTGGCACAATCATCTTACTAGCAAATAGAGAAGCCATAAAAGAAGTTGTTTTGGAAAAAAGAGAACAAAGACCTAA

mRNA sequence

ATGGAAAGTCTAAATACGATCAGCTATGATTCTCAAAAAATTCTTCCTGTCAAGGTTTACAACATTGATATGAAGAATCACTACCAAAGGCCATCACCACCAGATCTAGGATGGGATGACTTACACTCAGATTTTCGATCTTTTAATGGAAATAATATCGAAACTTGGAACAGTGACGAATGTTCTAAAGGGCAGATGATGATCATTTTTCAAGAAATGTTTGTTGCTACAATAAGCTATCTTAGGAGAATGTGTCAAAGAGAAATTATCGATGCCTTAACTGCAAGGTTTACAGGAAACCTCAGAAGTTGGTGGCACAATCATCTTACTAGCAAATAGAGAAGCCATAAAAGAAGTTGTTTTGGAAAAAAGAGAACAAAGACCTAA

Coding sequence (CDS)

ATGGAAAGTCTAAATACGATCAGCTATGATTCTCAAAAAATTCTTCCTGTCAAGGTTTACAACATTGATATGAAGAATCACTACCAAAGGCCATCACCACCAGATCTAGGATGGGATGACTTACACTCAGATTTTCGATCTTTTAATGGAAATAATATCGAAACTTGGAACAGTGACGAATGTTCTAAAGGGCAGATGATGATCATTTTTCAAGAAATGTTTGTTGCTACAATAAGCTATCTTAGGAGAATGTGTCAAAGAGAAATTATCGATGCCTTAACTGCAAGGTTTACAGGAAACCTCAGAAGTTGGTGGCACAATCATCTTACTAGCAAATAG

Protein sequence

MESLNTISYDSQKILPVKVYNIDMKNHYQRPSPPDLGWDDLHSDFRSFNGNNIETWNSDECSKGQMMIIFQEMFVATISYLRRMCQREIIDALTARFTGNLRSWWHNHLTSK
Homology
[Close]
BLAST of MELO3C030425.2 vs. NCBI nr
Match: XP_022151716.1 (uncharacterized protein LOC111019629 [Momordica charantia])

HSP 1 Score: 100.5 bits (249), Expect = 3.8e-18
Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 0 

Query: 3   SLNTISYDSQKILPVKVYNIDMKNHYQRPSPPDLGWDDLHSDFRSFNGNNIETWNSDECS 62
           ++ TI+  S   + +   + ++KNHY RPSPPD+GWDDL  D R+++ ++I TWN D  S
Sbjct: 117 TIPTITQASSSTILLVTMHTEVKNHYPRPSPPDMGWDDLRHDQRTYDESSIITWNIDGYS 176

Query: 63  KGQMMIIFQEMFVATISYLRRMCQREIIDALTARFTGNLRSWWHNHLTSK 113
           + QMM  FQEM +A  ++  +    +    L +  +GNLRSWWHN LT +
Sbjct: 177 EAQMMNTFQEMMMAATAFSTKKPVLQTAQILISSLSGNLRSWWHNQLTDE 226

[Close]
BLAST of MELO3C030425.2 vs. NCBI nr
Match: KRG89655.1 (hypothetical protein GLYMA_20G037700 [Glycine max])

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 0 

Query: 8   SYDSQKILPV--KVYNIDMKNHYQRPSPPDLGWDDLHSD-FRSFNGNNIETWNSDECSKG 67
           S   + I P+  K +    K +YQRP+ PDL  ++   D F+SF+ NNI  WN D   + 
Sbjct: 150 SVSEKDINPINSKHWKTPSKLYYQRPTAPDLLLEERGEDNFKSFSANNIYKWNIDAQMEY 209

Query: 68  QMMIIFQEM-FVATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
            +M   Q M  VAT   +   C  E IID L A F+G L+ WW N+LT++
Sbjct: 210 NIMNTLQHMTMVATTYQMSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 259

[Close]
BLAST of MELO3C030425.2 vs. NCBI nr
Match: KRG99118.1 (hypothetical protein GLYMA_18G122400, partial [Glycine max])

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0 

Query: 5   NTI---SYDSQKILPV--KVYNIDMKNHYQRPSPPDLGWDDL-HSDFRSFNGNNIETWNS 64
           NTI   S   + I P+  K +    K +YQRP+ PDL  ++   ++F+SF+ NNI  WN 
Sbjct: 557 NTIEIGSVSEKNINPINSKHWKTPSKLYYQRPTAPDLLLEERGENNFKSFSANNIYEWNI 616

Query: 65  DECSKGQMMIIFQEM-FVATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
           D  ++  +M   Q M  VAT       C  E IID L A F+G L+ WW N+LT++
Sbjct: 617 DAQTEYNIMNTLQHMTMVATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 672

[Close]
BLAST of MELO3C030425.2 vs. NCBI nr
Match: KRG94207.1 (hypothetical protein GLYMA_19G068000 [Glycine max])

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 0 

Query: 8   SYDSQKILPV--KVYNIDMKNHYQRPSPPDLGWDDL-HSDFRSFNGNNIETWNSDECSKG 67
           S   + I P+  K +    K +YQRP+ PDL  ++   ++F+SF+ NNI  WN D  ++ 
Sbjct: 636 SVSEKNINPINSKHWKTTSKLYYQRPTAPDLLLEERGENNFKSFSANNIYEWNIDTQTEY 695

Query: 68  QMMIIFQEM-FVATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
            +M   Q M  VAT       C  E IID L A F+G L+ WW N+LT++
Sbjct: 696 NIMNTLQHMTMVATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 745

[Close]
BLAST of MELO3C030425.2 vs. NCBI nr
Match: KRH04460.1 (hypothetical protein GLYMA_17G162900 [Glycine max])

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 0 

Query: 18  KVYNIDMKNHYQRPSPPDLGWDDL-HSDFRSFNGNNIETWNSDECSKGQMMIIFQEM-FV 77
           K +    K +YQRP+ PDL  ++   ++F+SF+ NNI  WN D  ++  +M   Q M  V
Sbjct: 330 KPFKTPSKLYYQRPTAPDLLLEERGENNFKSFSANNIYEWNIDAQTEYNIMNTLQHMTMV 389

Query: 78  ATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
           AT       C  E IID L A F+G L+ WW N+LT++
Sbjct: 390 ATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 427

[Close]
BLAST of MELO3C030425.2 vs. TrEMBL
Match: tr|A0A0R0EG98|A0A0R0EG98_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_20G037700 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.0e-09
Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 0 

Query: 8   SYDSQKILPV--KVYNIDMKNHYQRPSPPDLGWDDLHSD-FRSFNGNNIETWNSDECSKG 67
           S   + I P+  K +    K +YQRP+ PDL  ++   D F+SF+ NNI  WN D   + 
Sbjct: 150 SVSEKDINPINSKHWKTPSKLYYQRPTAPDLLLEERGEDNFKSFSANNIYKWNIDAQMEY 209

Query: 68  QMMIIFQEM-FVATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
            +M   Q M  VAT   +   C  E IID L A F+G L+ WW N+LT++
Sbjct: 210 NIMNTLQHMTMVATTYQMSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 259

[Close]
BLAST of MELO3C030425.2 vs. TrEMBL
Match: tr|A0A0R0FAM5|A0A0R0FAM5_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max OX=3847 GN=GLYMA_18G122400 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0 

Query: 5   NTI---SYDSQKILPV--KVYNIDMKNHYQRPSPPDLGWDDL-HSDFRSFNGNNIETWNS 64
           NTI   S   + I P+  K +    K +YQRP+ PDL  ++   ++F+SF+ NNI  WN 
Sbjct: 557 NTIEIGSVSEKNINPINSKHWKTPSKLYYQRPTAPDLLLEERGENNFKSFSANNIYEWNI 616

Query: 65  DECSKGQMMIIFQEM-FVATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
           D  ++  +M   Q M  VAT       C  E IID L A F+G L+ WW N+LT++
Sbjct: 617 DAQTEYNIMNTLQHMTMVATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 672

[Close]
BLAST of MELO3C030425.2 vs. TrEMBL
Match: tr|K7MC34|K7MC34_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G177300 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 0 

Query: 8   SYDSQKILPV--KVYNIDMKNHYQRPSPPDLGWDDL-HSDFRSFNGNNIETWNSDECSKG 67
           S   + I P+  K +    K +YQRP+ PDL  ++   ++F+SF+ NNI  WN D  ++ 
Sbjct: 632 SVSEKNINPINSKHWKTPSKLYYQRPTAPDLLLEERGENNFKSFSANNIYEWNIDAQTEY 691

Query: 68  QMMIIFQEM-FVATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
            +M   Q M  VAT       C  E IID L A F+G L+ WW N+LT++
Sbjct: 692 NIMNTLQHMTMVATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 741

[Close]
BLAST of MELO3C030425.2 vs. TrEMBL
Match: tr|K7MLZ7|K7MLZ7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_17G162900 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 0 

Query: 18  KVYNIDMKNHYQRPSPPDLGWDDL-HSDFRSFNGNNIETWNSDECSKGQMMIIFQEM-FV 77
           K +    K +YQRP+ PDL  ++   ++F+SF+ NNI  WN D  ++  +M   Q M  V
Sbjct: 330 KPFKTPSKLYYQRPTAPDLLLEERGENNFKSFSANNIYEWNIDAQTEYNIMNTLQHMTMV 389

Query: 78  ATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
           AT       C  E IID L A F+G L+ WW N+LT++
Sbjct: 390 ATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 427

[Close]
BLAST of MELO3C030425.2 vs. TrEMBL
Match: tr|A0A0R0EIU8|A0A0R0EIU8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_19G068000 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 0 

Query: 8   SYDSQKILPV--KVYNIDMKNHYQRPSPPDLGWDDL-HSDFRSFNGNNIETWNSDECSKG 67
           S   + I P+  K +    K +YQRP+ PDL  ++   ++F+SF+ NNI  WN D  ++ 
Sbjct: 636 SVSEKNINPINSKHWKTTSKLYYQRPTAPDLLLEERGENNFKSFSANNIYEWNIDTQTEY 695

Query: 68  QMMIIFQEM-FVATISYLRRMCQRE-IIDALTARFTGNLRSWWHNHLTSK 113
            +M   Q M  VAT       C  E IID L A F+G L+ WW N+LT++
Sbjct: 696 NIMNTLQHMTMVATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNE 745

The following BLAST results are available for this feature:
BLAST of MELO3C030425.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151716.13.8e-1841.82uncharacterized protein LOC111019629 [Momordica charantia][more]
KRG89655.11.2e-0839.09hypothetical protein GLYMA_20G037700 [Glycine max][more]
KRG99118.11.6e-0838.79hypothetical protein GLYMA_18G122400, partial [Glycine max][more]
KRG94207.12.1e-0838.18hypothetical protein GLYMA_19G068000 [Glycine max][more]
KRH04460.12.1e-0839.80hypothetical protein GLYMA_17G162900 [Glycine max][more]
BLAST of MELO3C030425.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030425.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030425.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0R0EG98|A0A0R0EG98_SOYBN8.0e-0939.09Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_20G037700 PE=4 SV=1[more]
tr|A0A0R0FAM5|A0A0R0FAM5_SOYBN1.0e-0838.79Uncharacterized protein (Fragment) OS=Glycine max OX=3847 GN=GLYMA_18G122400 PE=... [more]
tr|K7MC34|K7MC34_SOYBN1.4e-0838.18Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G177300 PE=4 SV=1[more]
tr|K7MLZ7|K7MLZ7_SOYBN1.4e-0839.80Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_17G162900 PE=4 SV=1[more]
tr|A0A0R0EIU8|A0A0R0EIU8_SOYBN1.4e-0838.18Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_19G068000 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030425.2.1MELO3C030425.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030425.2Cucumber (Gy14) v1cgymedB560
MELO3C030425.2Cucurbita maxima (Rimu)cmamedB031
MELO3C030425.2Cucurbita maxima (Rimu)cmamedB487
MELO3C030425.2Cucurbita moschata (Rifu)cmomedB020
MELO3C030425.2Cucurbita moschata (Rifu)cmomedB474
MELO3C030425.2Cucurbita pepo (Zucchini)cpemedB859
MELO3C030425.2Wild cucumber (PI 183967)cpimedB209
MELO3C030425.2Cucumber (Chinese Long) v2cumedB208
MELO3C030425.2Bottle gourd (USVL1VR-Ls)lsimedB325
MELO3C030425.2Watermelon (Charleston Gray)medwcgB325
MELO3C030425.2Watermelon (97103) v1medwmB364
MELO3C030425.2Cucumber (Chinese Long) v3cucmedB212
MELO3C030425.2Watermelon (97103) v2medwmbB319
MELO3C030425.2Wax gourdmedwgoB438
MELO3C030425.2Cucumber (Gy14) v2cgybmedB186