MELO3C030295.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030295.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsubtilisin-like protease SBT3.17 isoform X1
Locationchr03 : 26568970 .. 26569395 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGATGAAAACAAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGAGGAAGTCAGCGAGACTTGGAAGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCAGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGCGCATGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTTACGAATTTGGATAAGGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGTCTAAGGATGAGAGGGAGTGCTTTTGTAGAGTTCTCCTACGAGACATCACGAGATAG

mRNA sequence

ATGAGGGATGAAAACAAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGAGGAAGTCAGCGAGACTTGGAAGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCAGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGCGCATGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTTACGAATTTGGATAAGGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGTCTAAGGATGAGAGGGAGTGCTTTTGTAGAGTTCTCCTACGAGACATCACGAGATAG

Coding sequence (CDS)

ATGAGGGATGAAAACAAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGAGGAAGTCAGCGAGACTTGGAAGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCAGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGCGCATGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTTACGAATTTGGATAAGGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGTCTAAGGATGAGAGGGAGTGCTTTTGTAGAGTTCTCCTACGAGACATCACGAGATAG

Protein sequence

MRDENKEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDLEVEAIHLALDQTNKQLRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGFVLMSKDERECFCRVLLRDITR
Homology
[Close]
BLAST of MELO3C030295.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 111/141 (78.72%), Postives = 121/141 (85.82%), Query Frame = 0 

Query: 1   MRDENKEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLAL 60
           M D N++FPPVYS+G+D+ QDDVRASRPS        XXX  RKRGSQRD +VEAIHLAL
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  DQTNKQLRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGF 120
           DQTN+QLR IAEWPAR LANDNHVR EFFRILREMPELT+LD+ALLQRHLLSRMDDLRGF
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 602

Query: 121 VLMSKDERECFCRVLLRDITR 142
           VLM +DERE FCRVLLRDI R
Sbjct: 603 VLMPEDEREGFCRVLLRDIER 623

[Close]
BLAST of MELO3C030295.2 vs. NCBI nr
Match: XP_016900897.1 (PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo])

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 1   MRDEN-KEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLA 60
           M DEN  EFP +YSQ I +SQDDVRASRP   S+ RTG   SK+KR SQ + E+E IH+A
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  LDQTNKQLRMIAEWPARTLANDNHV 85
           L+  N QLR I EW AR LAND  V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C030295.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 0 

Query: 7   EFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLALDQTNKQ 66
           +FPP+YS G+++S DD+  +R +R SE R     SKRKR        + +  A++  N+Q
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGFVLMSKD 126
           L  IAEWP     +    R E  R L  +PELT +D+  L R L+  +DD++ F+ +   
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDH 643

Query: 127 ERECFCRVLLRD 139
            +  +C ++L++
Sbjct: 644 MKYPYCSLILQE 655

[Close]
BLAST of MELO3C030295.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13
Identity = 45/135 (33.33%), Postives = 82/135 (60.74%), Query Frame = 0 

Query: 5   NKEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLALDQTN 64
           +++ P +YSQG+ +S D++   R  +ASE R     SKRKRGS+R   VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 65  KQLRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGFVLMS 124
           +QL+ IA+WP    A +  +R +  + L+++P+L + D+A L + L   ++ + GF+ + 
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 125 KDERECFCRVLLRDI 140
            + +  +C +LL++I
Sbjct: 291 TELKLEYCNILLQNI 305

[Close]
BLAST of MELO3C030295.2 vs. NCBI nr
Match: ADN33753.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 61.2 bits (147), Expect = 3.2e-06
Identity = 35/116 (30.17%), Postives = 64/116 (55.17%), Query Frame = 0 

Query: 5   NKEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLALDQTN 64
           +++ P +YSQG+ +  +++   R  +ASE R     SKRK+GS+    VE I  A++  N
Sbjct: 13  DQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGN 72

Query: 65  KQLRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGF 121
            QL+   +W     + +  +  E  + L+++PEL + D+A L + L   ++ + GF
Sbjct: 73  DQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFRSVEAIEGF 128

[Close]
BLAST of MELO3C030295.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 111/141 (78.72%), Postives = 121/141 (85.82%), Query Frame = 0 

Query: 1   MRDENKEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLAL 60
           M D N++FPPVYS+G+D+ QDDVRASRPS        XXX  RKRGSQRD +VEAIHLAL
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  DQTNKQLRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGF 120
           DQTN+QLR IAEWPAR LANDNHVR EFFRILREMPELT+LD+ALLQRHLLSRMDDLRGF
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 602

Query: 121 VLMSKDERECFCRVLLRDITR 142
           VLM +DERE FCRVLLRDI R
Sbjct: 603 VLMPEDEREGFCRVLLRDIER 623

[Close]
BLAST of MELO3C030295.2 vs. TrEMBL
Match: tr|A0A1S4DY48|A0A1S4DY48_CUCME (uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.2e-15
Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 1   MRDEN-KEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLA 60
           M DEN  EFP +YSQ I +SQDDVRASRP   S+ RTG   SK+KR SQ + E+E IH+A
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  LDQTNKQLRMIAEWPARTLANDNHV 85
           L+  N QLR I EW AR LAND  V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C030295.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-13
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 0 

Query: 7   EFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLALDQTNKQ 66
           +FPP+YS G+++S DD+  +R +R SE R     SKRKR        + +  A++  N+Q
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGFVLMSKD 126
           L  IAEWP     +    R E  R L  +PELT +D+  L R L+  +DD++ F+ +   
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDH 643

Query: 127 ERECFCRVLLRD 139
            +  +C ++L++
Sbjct: 644 MKYPYCSLILQE 655

[Close]
BLAST of MELO3C030295.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 45/135 (33.33%), Postives = 82/135 (60.74%), Query Frame = 0 

Query: 5   NKEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLALDQTN 64
           +++ P +YSQG+ +S D++   R  +ASE R     SKRKRGS+R   VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 65  KQLRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGFVLMS 124
           +QL+ IA+WP    A +  +R +  + L+++P+L + D+A L + L   ++ + GF+ + 
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 125 KDERECFCRVLLRDI 140
            + +  +C +LL++I
Sbjct: 291 TELKLEYCNILLQNI 305

[Close]
BLAST of MELO3C030295.2 vs. TrEMBL
Match: tr|E5GBB1|E5GBB1_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-06
Identity = 35/116 (30.17%), Postives = 64/116 (55.17%), Query Frame = 0 

Query: 5   NKEFPPVYSQGIDLSQDDVRASRPSRASEGRTGXXXSKRKRGSQRDLEVEAIHLALDQTN 64
           +++ P +YSQG+ +  +++   R  +ASE R     SKRK+GS+    VE I  A++  N
Sbjct: 13  DQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGN 72

Query: 65  KQLRMIAEWPARTLANDNHVRMEFFRILREMPELTNLDKALLQRHLLSRMDDLRGF 121
            QL+   +W     + +  +  E  + L+++PEL + D+A L + L   ++ + GF
Sbjct: 73  DQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFRSVEAIEGF 128

The following BLAST results are available for this feature:
BLAST of MELO3C030295.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33754.11.9e-5178.72retrotransposon protein [Cucumis melo subsp. melo][more]
XP_016900897.11.1e-1460.00PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 P... [more]
ADN34114.11.6e-1334.09retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008441954.13.5e-1333.33PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
ADN33753.13.2e-0630.17hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C030295.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030295.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030295.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GBB2|E5GBB2_CUCME1.3e-5178.72Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DY48|A0A1S4DY48_CUCME7.2e-1560.00uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=... [more]
tr|E5GCB5|E5GCB5_CUCME1.0e-1334.09Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME2.3e-1333.33uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
tr|E5GBB1|E5GBB1_CUCME2.1e-0630.17Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030295.2.1MELO3C030295.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030295.2Cucumber (Gy14) v2cgybmedB102
MELO3C030295.2Cucurbita maxima (Rimu)cmamedB171
MELO3C030295.2Cucurbita maxima (Rimu)cmamedB817
MELO3C030295.2Cucurbita moschata (Rifu)cmomedB162
MELO3C030295.2Cucurbita moschata (Rifu)cmomedB812
MELO3C030295.2Cucurbita pepo (Zucchini)cpemedB111
MELO3C030295.2Wild cucumber (PI 183967)cpimedB116
MELO3C030295.2Cucurbita pepo (Zucchini)cpemedB891
MELO3C030295.2Cucumber (Chinese Long) v2cumedB116
MELO3C030295.2Bottle gourd (USVL1VR-Ls)lsimedB490
MELO3C030295.2Watermelon (Charleston Gray)medwcgB289
MELO3C030295.2Watermelon (97103) v1medwmB296
MELO3C030295.2Silver-seed gourdcarmedB0146
MELO3C030295.2Silver-seed gourdcarmedB0659
MELO3C030295.2Cucumber (Chinese Long) v3cucmedB060
MELO3C030295.2Watermelon (97103) v2medwmbB290
MELO3C030295.2Wax gourdmedwgoB335