MELO3C029705.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C029705.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	universal stress protein YxiE
Location	chr02 : 20469523 .. 20473863 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTGTTTTCCTCTTTACATCTCATTTCCACTTTGTATGTGGAAGTATTATCTATGATCTTTCACCCCAGAGTAGAGGGCAAACGAACAAAGTGTTGAGTTCTATGTCCTAGAACTCTTAATGTTAAACATATTCTTTTGTTCATAAAGTTGATTGCGAAGTATTGTTCAATAAATAGTTATTGAATTTATGATTTGCAAATTATAACCTTAAATCCAATAAAGTAAGGTTTCTTGACTATAGTACGAATGCTTAAACTTTATCTAATGACATAAAAGTCAATCAAGTTCAAGTTAATAGTCTAAATGATCTAGAGTATACAACCTACTTTGTATTTGATACAAACAATGTTATCCTAGATCATTCATGTAGAGACGTGCGAGTGGGGGTGTCTTATGCAAAGAGTTTATATGAAATTGAATCATGAAATAGTTACTTTTACTTTATAGCATCGTTTACGGGTTAAAACTGGCATTTTCGAATTTCATGACATAGATAACTCAATCTTAACCTTGAGCTAACTATGAACTCCTATTTATCTAGGATTACCCTTAGATATACATCGATAATAACAGCTCAACAAGCCCCATTTCAGAGGTGAGATCGAGTAGATCGCTCGGTACATAGGGTGCAAGATGAAATTCACTCCTACCCGTTTCTAAGGTTAGTAAAGTGGTTGTTCCTTTAAGTGTTGACTCAAAGTCTCGTTGGCTCGAGAGGGGATTTGCTTTAATGGTTAGACCATAAACCAAATTTTCATTTGAGGATTAGAGGGACTTAAAGAACAAGTAATTTTGGGGGTAAAAGGATGATTTTGACCAAGCTATAATTACGAACAAATTGCGAATGGTCAACTTACTAATTATGACTGTATCAAGTGGACATAGGATTCTTTACATGCCAAATTCTCACAGTATAAAATTTAGTTTAATTCAAGAGCACCCCTCTTATTGAAGAAGTACTTCGTTTAATCTTTATTTTCTTGATGAACATAAATTATATTCTATGCTTATTAAAATTAGGAATTGTTGCTGTTACTTCTCCAGGTGGCTGTAATATCCATCACAGAAGATGGGGATCCTGGAAGGTTATTGATAGACCTCCAATAGTATTTCAGTATAGTAGAAGAAATAAGAAGAAGGTTTAGTAGGAGTGGCAGTATTGTAATAAAAAGACATTTTATAGTAAGTTGTTAGTAGTCTGTTATTTTAGTAGGAGGTCGGTGTGAGTTAGTATAAATAGGGAAGTTTGGGCGGGAAAACATTTTATGTGAAATTTGGGAAATTTACATTGTAATTGAATTCATTTCATCAATAAGATACGGAAATTACTTTCGATTAGTTCGGTATCTATCAGTTATATATGAGACAGTTGAAAAGTTCAATATAAATTTGCTTGTTTTGGCGGATCGTGGCCTTGGGAGAATTAAGAGGTTAGCTCAGGAGGAGAGTTTTTATTTTTCAAAATCTGCTTTTGTGGGGCCTTCGACTAAACTTGTTTGGACGTAGTTTTGTTTAGAACAATTCTCATTGGGTGTTAAAATACATGCATTGGTTAAATACTTATAAACCATGCTTAGTATCTATTATATTTCAAATGATTATATTTAAGAATTTGCAAGCTTATGTTCTCACTTATATTTAGTTGCAGAGTATTTATGAATTTATAGCTTTTCGTTTCTAATTGAAATATTTCCAACTACTCAGAGTCTTACTGATCTTTAATTAGCAAGAATTAGAAATACAACTTTTTTGTTTTCTTCTTTTTATTAATATTGTCCCTTCTTAATTAGAATGGGTTTATGTCTTACATGATGATGAAATATCGAAATTGATATATGTCTCATACAGAGCTCCTATAGTGTGAGCACTAATCGTTCAAAATGCCAAGTGTTCTGTCCTTGTTGTGAAGAAACCATTGAAAGGTGAGTTTTGCTGCTTTGCTCACTAAACTAAATTACAGTTGAATTTTGGATGTTTTAAATTTAATTTTGTTTTTTTGAGTTTTGCAAACCGTATCGTTCTCTCATGGCGGCCTACTTAATGAAAGTGAATGCTTACAGTTATTATTTAAAGAAGCTACTTAGGATTGATTAAAAGAGCTTTGTGGAAGGTTGTCTAACATATTTACCAAGTTTGAAGGAGCCTTTTGTCGTTGCTAATGTGAGTGCTTGGAATGATCATTATAGTATTGTCTTTAAGTTCTATGCAAGTATAACATCCCTAATAGACCATTTTGCTCTTCTATGACCAAAGACCATAACTACTTCGGGCTACAGTAGTTAAGCTTTTTTTGGTATTATTTACCGTACTTCTCTATGTTATGACATTGGAAATTGTTTATTGTGCCAGATCTCTAAAATTGTGCAATATACGTTCTAAATAGTTTATTGTGTTCATGGGTTTGACTTGATTTGGTTCTTGCAGGACAGGTCATATCATGGTGCCATTATTGAACTTTTCACTTTTTAGAACATAATGTTCCAATATTTTGGTCTATTGGGTACTGGGTAGCTCTATTATGTTAATCTGAGTGTCTATTTTCTTTTGTGTTTATTGTTTCTGAGGTGATTTTTATCTGACTGCAAAAATGATCTAGAGGGATTTCACTTTTTCATTTCAATTATGGCATTTTGTGGTTTATGATATTTGTGTTGGATTGATGAAAATTTGAACTTTGCTGAGTTTTTGTTTTGTGGCAATAGGACTAAGTTCATGAATCTGGGAGGTGTAAAATCGAATGCTCATGAGACAACTTTTGAAATTTGAAGTCGAGTGGTAATCAAATCTGTAGTTTTTTTTNTTTTTTTTTTTTTTTTTTATTAAATCATTGTTGTTTAAGTTGTCTGGTTGAGATATGAGATTTCTGTTGAAAAAATTATGTAATGTGCCATTTAGATCTTGAATGAATACCAATTTGTCTGATCCTTTATGTTTGATGCCATTTAAGATTTTTCAGCAAATTGATGCAGAAGTCCACTATGACAGTATTATGTACTACACAAATGCAAGAAATTTGTTCTGCTAATTGTTTTATTTTGTCCCAGTGCTTATTGTTTTACACTTTAATTGCAGATTTATCATAAGCCCTATCGTTATCAACATCATGTGCATTGGATTTAAATTTTTAATGGATTCAAAGTAATAATTTAGGCTATCCAGAGAAAGAGGAAGATAGTATCAAACCAGTTGTTTAGGTTTAATAATGAATATAAATTAATAATGGATTTCAGTGAATATAAATTTCAAGTTTAATTTTATGTGTACTATGTTTCATGAATGTCGAAAGCATTGAAGTTGACTTATGCTACCTTGGTACACGAAGTGTAATGGTTATCTTGCTGTTATGGTATTTATAGCTTAGTTTAGGGCGACGCTACTTTTGTTGAGTTTAATTATATGAGTTAGATATATTGTTCACTTGGATCGTTAAGTTTTTTTTTCCTTTATAGTTTCTACTACGTTCATTTTAGTAAATGAGTTTTTGTTACATTCTTTTAGTTTTAGGTTATCAAGTTTTTCATAAATTTGTTTAACTGTTTGTGTTTGTAAGTTTTGTCGTTCATCTTTATGCATTTTGCCCGATATATTGAATTGTTATTAGTCTTTACTTTGCTCTTACTTCGATAAGCTTTAGTTTGTTTGGGTTGAGCGCAAGTTGTTTATGGTTTGTTGATTACTATAGAATCACACATTTTTCTTATTTCATATTATTATGTTTGTGTAAATTACGGTGATTCAATTAAGGTTGTATAGTTACTAGCATGGTTTCAAATCGGACTCGATTGAAATTAGTTGTTATTTGGAATTGTCTTGTATTGAAAGTCGTATATGTTGTGGGTTTTATTTGTGCTATAACTTTATCATTTGGATACTTCTATTTACATTATTCAAAGGTTTGTAAAAGATGAGACCAATGACAACACGTATGCGGATTGGTGGAGGAGGGCAACGCAAAAGCATGATGGCAGCCGAATTCATGTTAAGTTAGTGATTCAAAACATTTTTTTCCTTCTTAAAAATTACAAGTACATTTTAATTACATAGTACTTGATTTTGGAATGTTTAATCGAAGTGTTGGAAGGAAGGAAGTTGATTTAACTACATAACTCAGAAGCGTTTAGCTAATACTAAACTTAGAAGTTATTTCAATCTATATGTTATTTTTCGGTACTATGTTATTCTAATTGATGTAGGTGTTAAAAGTGACAAATTCAAGAGTTAGCGTTATTATTGTGGAAGGTAGGAGCATAGAGAGATTGAGATTTAGTTTAAGGAGGATTTCTTTTGATAGTTGTTATGAGATGATAGTGATAGAGATTAAACATGCACGGTGA

mRNA sequence

ATGAAGTTTGTTTTCCTCTTTACATCTCATTTCCACTTTGTATGTGGAAGTATTATCTATGATCTTTCACCCCAGAGTAGAGGGCAAACGAACAAAGAATTGTTGCTGTTACTTCTCCAGGTGGCTGTAATATCCATCACAGAAGATGGGGATCCTGGAAGATACGGAAATTACTTTCGATTAGTTCGGTATCTATCAGTTATATATGAGACAGTTGAAAAGTTCAATATAAATTTGCTTGTTTTGGCGGATCGTGGCCTTGGGAGAATTAAGAGGTTAGCTCAGGAGGAGAAATGGGTTTATGTCTTACATGATGATGAAATATCGAAATTGATATATGTCTCATACAGAGCTCCTATATTTTGCAAACCGTATCGTTCTCTCATGGCGGCCTACTTAATGAAAGTGAATGCTTACAATGAGACCAATGACAACACGTATGCGGATTGGTGGAGGAGGGCAACGCAAAAGCATGATGGCAGCCGAATTCATGTGTTAAAAGTGACAAATTCAAGAGTTAGCGTTATTATTGTGGAAGGTAGGAGCATAGAGAGATTGAGATTTAGTTTAAGGAGGATTTCTTTTGATAGTTGTTATGAGATGATAGTGATAGAGATTAAACATGCACGGTGA

Coding sequence (CDS)

ATGAAGTTTGTTTTCCTCTTTACATCTCATTTCCACTTTGTATGTGGAAGTATTATCTATGATCTTTCACCCCAGAGTAGAGGGCAAACGAACAAAGAATTGTTGCTGTTACTTCTCCAGGTGGCTGTAATATCCATCACAGAAGATGGGGATCCTGGAAGATACGGAAATTACTTTCGATTAGTTCGGTATCTATCAGTTATATATGAGACAGTTGAAAAGTTCAATATAAATTTGCTTGTTTTGGCGGATCGTGGCCTTGGGAGAATTAAGAGGTTAGCTCAGGAGGAGAAATGGGTTTATGTCTTACATGATGATGAAATATCGAAATTGATATATGTCTCATACAGAGCTCCTATATTTTGCAAACCGTATCGTTCTCTCATGGCGGCCTACTTAATGAAAGTGAATGCTTACAATGAGACCAATGACAACACGTATGCGGATTGGTGGAGGAGGGCAACGCAAAAGCATGATGGCAGCCGAATTCATGTGTTAAAAGTGACAAATTCAAGAGTTAGCGTTATTATTGTGGAAGGTAGGAGCATAGAGAGATTGAGATTTAGTTTAAGGAGGATTTCTTTTGATAGTTGTTATGAGATGATAGTGATAGAGATTAAACATGCACGGTGA

Protein sequence

MKFVFLFTSHFHFVCGSIIYDLSPQSRGQTNKELLLLLLQVAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKRLAQEEKWVYVLHDDEISKLIYVSYRAPIFCKPYRSLMAAYLMKVNAYNETNDNTYADWWRRATQKHDGSRIHVLKVTNSRVSVIIVEGRSIERLRFSLRRISFDSCYEMIVIEIKHAR

Homology

[Close]

BLAST of MELO3C029705.2 vs. NCBI nr
Match: XP_004135089.1 (PREDICTED: universal stress protein A-like protein [Cucumis sativus] >KGN52092.1 hypothetical protein Csa_5G609780 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05
Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 41  VAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKR 93
           VA ISITEDGDPG+             I +TVEK NI+LLVL DRGLGRIKR
Sbjct: 93  VAAISITEDGDPGK------------TICDTVEKLNISLLVLGDRGLGRIKR 132

[Close]

BLAST of MELO3C029705.2 vs. NCBI nr
Match: XP_008446610.1 (PREDICTED: universal stress protein YxiE [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-05
Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 41  VAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKR 93
           VA ISITEDGDPG            + I +TVEK NI+LLVL DRGLGRIKR
Sbjct: 93  VAAISITEDGDPG------------TTICDTVEKLNISLLVLGDRGLGRIKR 132

[Close]

BLAST of MELO3C029705.2 vs. NCBI nr
Match: XP_022945228.1 (uncharacterized protein LOC111449532 [Cucurbita moschata])

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04
Identity = 31/52 (59.62%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 41  VAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKR 93
           VA ISITE GDPGR             I +TVEK NINLLVL D G+GRIKR
Sbjct: 108 VAAISITEVGDPGR------------TICDTVEKLNINLLVLGDHGIGRIKR 147

[Close]

BLAST of MELO3C029705.2 vs. NCBI nr
Match: XP_023541640.1 (universal stress protein A-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04
Identity = 31/52 (59.62%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 41  VAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKR 93
           VA ISITE GDPGR             I +TVEK NINLLVL D G+GRIKR
Sbjct: 108 VAAISITEVGDPGR------------TICDTVEKLNINLLVLGDHGIGRIKR 147

[Close]

BLAST of MELO3C029705.2 vs. NCBI nr
Match: XP_022968136.1 (uncharacterized protein LOC111467462 [Cucurbita maxima])

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-04
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 41  VAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKR 93
           VA ISITE G+PGR            +I +TVEK NINLLVL D G+GRIKR
Sbjct: 108 VAAISITEVGEPGR------------MICDTVEKLNINLLVLGDHGIGRIKR 147

[Close]

BLAST of MELO3C029705.2 vs. TrEMBL
Match: tr|A0A0A0KUI8|A0A0A0KUI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609780 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.1e-06
Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 41  VAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKR 93
           VA ISITEDGDPG+             I +TVEK NI+LLVL DRGLGRIKR
Sbjct: 93  VAAISITEDGDPGK------------TICDTVEKLNISLLVLGDRGLGRIKR 132

[Close]

BLAST of MELO3C029705.2 vs. TrEMBL
Match: tr|A0A1S3BEZ1|A0A1S3BEZ1_CUCME (universal stress protein YxiE OS=Cucumis melo OX=3656 GN=LOC103489292 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05
Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 41  VAVISITEDGDPGRYGNYFRLVRYLSVIYETVEKFNINLLVLADRGLGRIKR 93
           VA ISITEDGDPG            + I +TVEK NI+LLVL DRGLGRIKR
Sbjct: 93  VAAISITEDGDPG------------TTICDTVEKLNISLLVLGDRGLGRIKR 132

The following BLAST results are available for this feature:

BLAST of MELO3C029705.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135089.1	1.4e-05	61.54	PREDICTED: universal stress protein A-like protein [Cucumis sativus] >KGN52092.1...	[more]
XP_008446610.1	1.8e-05	61.54	PREDICTED: universal stress protein YxiE [Cucumis melo]	[more]
XP_022945228.1	1.2e-04	59.62	uncharacterized protein LOC111449532 [Cucurbita moschata]	[more]
XP_023541640.1	1.2e-04	59.62	universal stress protein A-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022968136.1	2.6e-04	57.69	uncharacterized protein LOC111467462 [Cucurbita maxima]	[more]

BLAST of MELO3C029705.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C029705.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C029705.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUI8\|A0A0A0KUI8_CUCSA	9.1e-06	61.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609780 PE=4 SV=1	[more]
tr\|A0A1S3BEZ1\|A0A1S3BEZ1_CUCME	1.2e-05	61.54	universal stress protein YxiE OS=Cucumis melo OX=3656 GN=LOC103489292 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029705.2.1	MELO3C029705.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C029705.2	Cucumber (Gy14) v2	cgybmedB035
MELO3C029705.2	Cucumber (Gy14) v1	cgymedB483
MELO3C029705.2	Cucurbita maxima (Rimu)	cmamedB074
MELO3C029705.2	Cucurbita maxima (Rimu)	cmamedB117
MELO3C029705.2	Cucurbita moschata (Rifu)	cmomedB067
MELO3C029705.2	Cucurbita pepo (Zucchini)	cpemedB818
MELO3C029705.2	Wild cucumber (PI 183967)	cpimedB039
MELO3C029705.2	Cucumber (Chinese Long) v2	cumedB037
MELO3C029705.2	Bottle gourd (USVL1VR-Ls)	lsimedB424
MELO3C029705.2	Watermelon (Charleston Gray)	medwcgB250
MELO3C029705.2	Silver-seed gourd	carmedB0021
MELO3C029705.2	Cucumber (Chinese Long) v3	cucmedB042
MELO3C029705.2	Watermelon (97103) v2	medwmbB252