MELO3C029657.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C029657.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr02 : 17419412 .. 17420591 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAATGAGGAGGATAGCACTCTTGTGGAGTGTTTAATGAAGTTGATGTCAATGGGGAATGGAAATCGGATAATGGTACGTTTCAGCCAGGTTACCACGCCCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACAATAATTGATTGTAGAATTAAAACACTGAAGCGGACATTCCAGGCCATCACCGAAATGCAGGGGCCAGCCTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATTATTGCGGAGAAAGAATTATTTGATAATTCGGCTAGGGTAAGGAAAATAATATAAACGTCACACAACGTTCGCAATGTACATTTACTTAACAATTTTTTTATTAGTACTCATAAGTGATCTTTTTTTTCCCCGCAATCGCATCCTGTAGCGAAGGGACTCCTCAACAAACTGTTCTTGTATTACGATGAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGGTCGGTTCACTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATGACGGATTTGATATGGGAGATGGAAACGAGAAGTTCCCGCCCATGTACAGCTAGAGGATTGACCTCTCGCAAGACGATGTACGCGCATCATGACATTCTCACGCTTCAGAGGGTAGGACTGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGACAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAAGGCGCTATGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTTGGGGTTTCATACTCATGCCTGAGGATGAGAGAGAGGGATTTTGTAGAGTCCTCTCCTACGAGACATCACGAGATAGTTTATGTTTGTATCGACCTGGGTTGCTTCTTATTTGCTTACATTTTTTTTTCTGTATGATATTGACTGTTTATGCTTTTGCTATTGTAGACAACTATTTTTTTTCTTCATAATGTTTATTTAAAATTAAGGAAAATGGTCACAATTTCACGCAAGCGTTATAA

mRNA sequence

ATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAATGAGGAGGATAGCACTCTTGTGGAGTGTTTAATGAAGTTGATGTCAATGGGGAATGGAAATCGGATAATGCCAGGTTACCACGCCCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACAATAATTGATTGTAGAATTAAAACACTGAAGCGGACATTCCAGGCCATCACCGAAATGCAGGGGCCAGCCTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATTATTGCGGAGAAAGAATTATTTGATAATTCGGCTAGGGGACTCCTCAACAAACTGTTCTTGTATTACGATGAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGGTCGGTTCACTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATGACGGATTTGATATGGGAGATGGAAACGAGAAGTTCCCGCCCATGACTGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGACAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAAGGCGCTATGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTTGGGGTTTCATACTCATGCCTGAGGATGAGAGAGAGGGATTTTGTAGAGTCCTCTCCTACGAGACATCACGAGATAGTTTATGAAAATGGTCACAATTTCACGCAAGCGTTATAA

Coding sequence (CDS)

ATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAATGAGGAGGATAGCACTCTTGTGGAGTGTTTAATGAAGTTGATGTCAATGGGGAATGGAAATCGGATAATGCCAGGTTACCACGCCCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACAATAATTGATTGTAGAATTAAAACACTGAAGCGGACATTCCAGGCCATCACCGAAATGCAGGGGCCAGCCTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATTATTGCGGAGAAAGAATTATTTGATAATTCGGCTAGGGGACTCCTCAACAAACTGTTCTTGTATTACGATGAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGGTCGGTTCACTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATGACGGATTTGATATGGGAGATGGAAACGAGAAGTTCCCGCCCATGACTGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGACAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAAGGCGCTATGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTTGGGGTTTCATACTCATGCCTGAGGATGAGAGAGAGGGATTTTGTAGAGTCCTCTCCTACGAGACATCACGAGATAGTTTATGAAAATGGTCACAATTTCACGCAAGCGTTATAA

Protein sequence

MSTSNRAPRHVWTNEEDSTLVECLMKLMSMGNGNRIMPGYHAQLVRIMAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDNSARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKALCKGIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVYENGHNFTQAL

Homology

[Close]

BLAST of MELO3C029657.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 313.9 bits (803), Expect = 5.5e-82
Identity = 167/248 (67.34%), Postives = 178/248 (71.77%), Query Frame = 0


Query: 23  CLMKLMSMG----NGNRIMPGYHAQLVRIMAEKLPGCQVHATTIIDCRIKTLKRTFQAIT 82
           C M+L+SMG    +     PGY AQLVR+MAEKL GCQV ATT+IDCRIKTLKRTFQAI 
Sbjct: 340 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 399

Query: 83  EMQGPAYSGFGWNDEEKCIIAEKELFDN------SARGLLNKLFLYYDELTYVFGRDRVT 142
           EM GPA SGFGWNDEEKCI+AEKELFDN      +A+GLLN  F YYDELTYVFGRDR T
Sbjct: 400 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 459

Query: 143 GRFTETFVDVGSNEP-GGYDGFDMGDGNEKFPPMTGSS---------------------- 202
           GRF ETF DVGSNEP GGYD FDMGDGNE FPP+                          
Sbjct: 460 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXX 519

Query: 203 --GSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFRILREMPE 236
                RKRGSQR  DVE IHLALDQTN+QLR IAEWP   L NDNHVRTEFFRILREMPE
Sbjct: 520 XXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 579

[Close]

BLAST of MELO3C029657.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 220.7 bits (561), Expect = 6.3e-54
Identity = 120/266 (45.11%), Postives = 162/266 (60.90%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMG----NGNRIMPGYHAQLVRIMAEKLPGCQ 60
           M++S+R P+H WT EE++ LVECL++L++ G    +     PGY  QL R+MA K+PG  
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  VHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN----SARGLL 120
           +HA+T ID RIK +KR F A+ EM+GP  SGFGWNDE+KCI+AEKE+FD+    +A+GLL
Sbjct: 416 IHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 475

Query: 121 NKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYD-GFDMGDGNEKFPPMTG---- 180
           NK F++YDEL+YVFG+DR TG   E+F D+GSN+P GYD G      +  FPPM      
Sbjct: 476 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLN 535

Query: 181 --------------------SSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHA 234
                               SSGSKRKR        + +  A++  N+QL  IAEWP+  
Sbjct: 536 MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQ 595

[Close]

BLAST of MELO3C029657.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 114/270 (42.22%), Postives = 166/270 (61.48%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMG----NGNRIMPGYHAQLVRIMAEKLPGCQ 60
           M++ +RAP+H WT EE+   VECL++L+S G    +     PGY AQL R+MAEKLPG  
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  VHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN------SARG 120
           +  ++ IDC +K+LK+T+ AI EM+GP+ SGFGWN+E +CIIAE++LFD+      +A+G
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGY-DGFDMGDGNEKFPPMTGSS 180
           LL+K F YYD+L+YVFG+DR TG  +ETF +VGSN    + D   +GD +++  P   S 
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 G-------------------------SKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWP 235
           G                         SKRKRGS+R   VE I   ++  N+QL+ IA+WP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

[Close]

BLAST of MELO3C029657.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-44
Identity = 105/231 (45.45%), Postives = 138/231 (59.74%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMGNGNRIMPGYHAQLVRIMAEKLPGCQVHAT 60
           M++S+R P+H WT EE+++LVE +       +     PGY  QL R+MA K+PGC +HA+
Sbjct: 1   MTSSSRLPKHTWTKEEEASLVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNIHAS 60

Query: 61  TIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDNSARGLLNKLFLYYD 120
           T ID RIK LKR F A+ EM+GP  SGFGWNDE+KCI+AEKE    +A+GLLNK F++YD
Sbjct: 61  T-IDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKESHP-AAKGLLNKSFVHYD 120

Query: 121 ELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDMGDG--NEKFPPMTG----------- 180
           EL+YVFG+DR TG   E F D+GSN+P GYD F + D   +  F PM             
Sbjct: 121 ELSYVFGKDRATGGRAEIFADIGSNDPAGYDAF-VADAAPDTNFSPMYSPRLNMSPDDLM 180

Query: 181 -------------SSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPV 206
                        SSGS+RK         + +  A+   N+QL  IAEWP+
Sbjct: 181 ETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPI 228

[Close]

BLAST of MELO3C029657.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41
Identity = 90/172 (52.33%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMGNGNRIMPGYHAQLVRIMAEKLPGCQVHAT 60
           M++S+R P+H WT EE++ LVE +       +     PGY  QL R+MA K+PG  +HA+
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAS 60

Query: 61  TIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN------SARGLLNK 120
           T ID RIK +KR F A+ EM+GP  SGFGWNDE+KCI+AEKE+FD+      +A+GLLNK
Sbjct: 61  T-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNK 120

Query: 121 LFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDM-GDGNEKFPPM 166
            F++YDEL+YVFG+DR TG   E+F D+GSN+P GYD F      +  FPPM
Sbjct: 121 SFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPM 171

[Close]

BLAST of MELO3C029657.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.6e-82
Identity = 167/248 (67.34%), Postives = 178/248 (71.77%), Query Frame = 0


Query: 23  CLMKLMSMG----NGNRIMPGYHAQLVRIMAEKLPGCQVHATTIIDCRIKTLKRTFQAIT 82
           C M+L+SMG    +     PGY AQLVR+MAEKL GCQV ATT+IDCRIKTLKRTFQAI 
Sbjct: 340 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 399

Query: 83  EMQGPAYSGFGWNDEEKCIIAEKELFDN------SARGLLNKLFLYYDELTYVFGRDRVT 142
           EM GPA SGFGWNDEEKCI+AEKELFDN      +A+GLLN  F YYDELTYVFGRDR T
Sbjct: 400 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 459

Query: 143 GRFTETFVDVGSNEP-GGYDGFDMGDGNEKFPPMTGSS---------------------- 202
           GRF ETF DVGSNEP GGYD FDMGDGNE FPP+                          
Sbjct: 460 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXX 519

Query: 203 --GSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFRILREMPE 236
                RKRGSQR  DVE IHLALDQTN+QLR IAEWP   L NDNHVRTEFFRILREMPE
Sbjct: 520 XXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 579

[Close]

BLAST of MELO3C029657.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.2e-54
Identity = 120/266 (45.11%), Postives = 162/266 (60.90%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMG----NGNRIMPGYHAQLVRIMAEKLPGCQ 60
           M++S+R P+H WT EE++ LVECL++L++ G    +     PGY  QL R+MA K+PG  
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  VHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN----SARGLL 120
           +HA+T ID RIK +KR F A+ EM+GP  SGFGWNDE+KCI+AEKE+FD+    +A+GLL
Sbjct: 416 IHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 475

Query: 121 NKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYD-GFDMGDGNEKFPPMTG---- 180
           NK F++YDEL+YVFG+DR TG   E+F D+GSN+P GYD G      +  FPPM      
Sbjct: 476 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLN 535

Query: 181 --------------------SSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHA 234
                               SSGSKRKR        + +  A++  N+QL  IAEWP+  
Sbjct: 536 MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQ 595

[Close]

BLAST of MELO3C029657.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.5e-51
Identity = 114/270 (42.22%), Postives = 166/270 (61.48%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMG----NGNRIMPGYHAQLVRIMAEKLPGCQ 60
           M++ +RAP+H WT EE+   VECL++L+S G    +     PGY AQL R+MAEKLPG  
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  VHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN------SARG 120
           +  ++ IDC +K+LK+T+ AI EM+GP+ SGFGWN+E +CIIAE++LFD+      +A+G
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGY-DGFDMGDGNEKFPPMTGSS 180
           LL+K F YYD+L+YVFG+DR TG  +ETF +VGSN    + D   +GD +++  P   S 
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 G-------------------------SKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWP 235
           G                         SKRKRGS+R   VE I   ++  N+QL+ IA+WP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

[Close]

BLAST of MELO3C029657.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 105/231 (45.45%), Postives = 138/231 (59.74%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMGNGNRIMPGYHAQLVRIMAEKLPGCQVHAT 60
           M++S+R P+H WT EE+++LVE +       +     PGY  QL R+MA K+PGC +HA+
Sbjct: 1   MTSSSRLPKHTWTKEEEASLVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNIHAS 60

Query: 61  TIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDNSARGLLNKLFLYYD 120
           T ID RIK LKR F A+ EM+GP  SGFGWNDE+KCI+AEKE    +A+GLLNK F++YD
Sbjct: 61  T-IDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKESHP-AAKGLLNKSFVHYD 120

Query: 121 ELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDMGDG--NEKFPPMTG----------- 180
           EL+YVFG+DR TG   E F D+GSN+P GYD F + D   +  F PM             
Sbjct: 121 ELSYVFGKDRATGGRAEIFADIGSNDPAGYDAF-VADAAPDTNFSPMYSPRLNMSPDDLM 180

Query: 181 -------------SSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPV 206
                        SSGS+RK         + +  A+   N+QL  IAEWP+
Sbjct: 181 ETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPI 228

[Close]

BLAST of MELO3C029657.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.2e-42
Identity = 90/172 (52.33%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MSTSNRAPRHVWTNEEDSTLVECLMKLMSMGNGNRIMPGYHAQLVRIMAEKLPGCQVHAT 60
           M++S+R P+H WT EE++ LVE +       +     PGY  QL R+MA K+PG  +HA+
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAS 60

Query: 61  TIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN------SARGLLNK 120
           T ID RIK +KR F A+ EM+GP  SGFGWNDE+KCI+AEKE+FD+      +A+GLLNK
Sbjct: 61  T-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNK 120

Query: 121 LFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDM-GDGNEKFPPM 166
            F++YDEL+YVFG+DR TG   E+F D+GSN+P GYD F      +  FPPM
Sbjct: 121 SFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPM 171

The following BLAST results are available for this feature:

BLAST of MELO3C029657.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33754.1	5.5e-82	67.34	retrotransposon protein [Cucumis melo subsp. melo]	[more]
ADN34114.1	6.3e-54	45.11	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008441954.1	3.8e-51	42.22	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
XP_008459131.1	2.0e-44	45.45	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]
XP_008466949.1	1.2e-41	52.33	PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]	[more]

BLAST of MELO3C029657.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C029657.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C029657.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBB2\|E5GBB2_CUCME	3.6e-82	67.34	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|E5GCB5\|E5GCB5_CUCME	4.2e-54	45.11	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	2.5e-51	42.22	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	1.4e-44	45.45	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]
tr\|A0A1S3CTN6\|A0A1S3CTN6_CUCME	8.2e-42	52.33	uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024752	Myb/SANT-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029657.2.1	MELO3C029657.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 12..105 e-value: 1.6E-5 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..180
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 9..142
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 9..142

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C029657.2	Cucumber (Gy14) v2	cgybmedB047
MELO3C029657.2	Cucumber (Gy14) v2	cgybmedB092
MELO3C029657.2	Cucumber (Gy14) v2	cgybmedB162
MELO3C029657.2	Cucumber (Gy14) v1	cgymedB210
MELO3C029657.2	Cucumber (Gy14) v1	cgymedB485
MELO3C029657.2	Cucumber (Gy14) v1	cgymedB511
MELO3C029657.2	Cucurbita maxima (Rimu)	cmamedB060
MELO3C029657.2	Cucurbita maxima (Rimu)	cmamedB112
MELO3C029657.2	Cucurbita maxima (Rimu)	cmamedB164
MELO3C029657.2	Cucurbita maxima (Rimu)	cmamedB469
MELO3C029657.2	Cucurbita maxima (Rimu)	cmamedB811
MELO3C029657.2	Cucurbita moschata (Rifu)	cmomedB052
MELO3C029657.2	Cucurbita moschata (Rifu)	cmomedB105
MELO3C029657.2	Cucurbita moschata (Rifu)	cmomedB154
MELO3C029657.2	Cucurbita moschata (Rifu)	cmomedB806
MELO3C029657.2	Cucurbita pepo (Zucchini)	cpemedB104
MELO3C029657.2	Cucurbita pepo (Zucchini)	cpemedB392
MELO3C029657.2	Cucurbita pepo (Zucchini)	cpemedB604
MELO3C029657.2	Cucurbita pepo (Zucchini)	cpemedB734
MELO3C029657.2	Cucurbita pepo (Zucchini)	cpemedB889
MELO3C029657.2	Wild cucumber (PI 183967)	cpimedB054
MELO3C029657.2	Wild cucumber (PI 183967)	cpimedB105
MELO3C029657.2	Wild cucumber (PI 183967)	cpimedB181
MELO3C029657.2	Cucumber (Chinese Long) v2	cumedB051
MELO3C029657.2	Cucumber (Chinese Long) v2	cumedB105
MELO3C029657.2	Cucumber (Chinese Long) v2	cumedB182
MELO3C029657.2	Melon (DHL92) v3.6.1	medmedB102
MELO3C029657.2	Melon (DHL92) v3.6.1	medmedB104
MELO3C029657.2	Bottle gourd (USVL1VR-Ls)	lsimedB108
MELO3C029657.2	Bottle gourd (USVL1VR-Ls)	lsimedB309
MELO3C029657.2	Bottle gourd (USVL1VR-Ls)	lsimedB425
MELO3C029657.2	Watermelon (Charleston Gray)	medwcgB221
MELO3C029657.2	Watermelon (Charleston Gray)	medwcgB242
MELO3C029657.2	Watermelon (Charleston Gray)	medwcgB249
MELO3C029657.2	Watermelon (97103) v1	medwmB268
MELO3C029657.2	Watermelon (97103) v1	medwmB277
MELO3C029657.2	Watermelon (97103) v1	medwmB288
MELO3C029657.2	Silver-seed gourd	carmedB0036
MELO3C029657.2	Silver-seed gourd	carmedB0135
MELO3C029657.2	Silver-seed gourd	carmedB0265
MELO3C029657.2	Silver-seed gourd	carmedB0579
MELO3C029657.2	Silver-seed gourd	carmedB0675
MELO3C029657.2	Cucumber (Chinese Long) v3	cucmedB054
MELO3C029657.2	Cucumber (Chinese Long) v3	cucmedB110
MELO3C029657.2	Cucumber (Chinese Long) v3	cucmedB185
MELO3C029657.2	Watermelon (97103) v2	medwmbB225
MELO3C029657.2	Watermelon (97103) v2	medwmbB242
MELO3C029657.2	Watermelon (97103) v2	medwmbB251
MELO3C029657.2	Wax gourd	medwgoB272
MELO3C029657.2	Wax gourd	medwgoB286
MELO3C029657.2	Wax gourd	medwgoB290