MELO3C029648.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C029648.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr02 : 16673568 .. 16675482 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAATTTTGAGATTTCAGGGTCCGTTTGGTAACGTTCCCGTTTCCCGTTTTCCATTTATGTTTCTAATTTTTTTTAAGAAACAGACGTGTTTGGTAACGTTCTTGTTTTTTGTTTCGAAAATAATTAGGAAACGTTTTTGGTTTAATAAGAAATTTGTGGAAATAATAAAAAAGAGTTTCTCCTCGTTCCGTTCCTATTCTCTCCTTCCATTTCTCCTCTTCGTTCTCGGGCTTTTTTCTCCCACGATTCTTCTTCTCTCTTTATTCTCCGTTTATTCTCCAGCTCTCTTCGTGCTCTGTTTCTTTTTTGTTCTCCAACTAAAGGTATGACATCCCTCTTTCTCTTGTCGATTTTACTGATGGATTTTTCTTTCAGATCTTTTTTTTTGCTGAGAATGATCAGAGGCGTTTGTTGTGATTCTGTGTGTTTTTTTATGGCTCTTAATCCCTCTTTCTCTTGCTAGATTGTTTTCCCTTTTTGTGTTCTATGTTAAGGGAAATTGAGAAATTCATGGTTTTAAAAAGGGATGCTAGAAATCCATGGTTTTAAAAGACTCTCAATCCTTCTTTCTCATGATGGGTTTTTTTTTAGATCTGTTCTTTTTTTTTTTGCTGGTGTTGTGTTTCTATGTTTTTTTTATTTAGTCTCAATCCATAATTACTATTACATTCTAGATGTCACAAAAATCAACTGAATAACTTTGTGTCGATGACGTTGTTGAGATTGCTGGATTAAAAGGTGAGGGACCATGGTCAAATAAGAGTGAAGTTTCGTTTGTAGACTTAATGGATGAAGAGGTTGTAAAAGGCAATCTACCAACTACAACATTTACAAAGACTAGTTGGAATCATATGAGAAACCAACTAAATGCTAGTACAAGATATAATTATTCTCATGATCAATTGAAAAATAAGTTCAACAAATTAAGACAAATTTACAAAGACTTCAAAAAAATATTGAGTGATATGACAGGAAATGGTTGAGATCCATTATTAGGTACCATCAATCTTGAAGAGGAACAATGTAACGAGCTTTTTAAGGTATAATAGTTGCATTTTTTTTCCATTTCTAATCATCTATAGGCGAATAAGAGAGCTAAAAAGTTTTTATTTTCTATAGGTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCGTCAACAAGACTTATTTCATATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAATGTTGGTGTTGAAGAGAATGATAAAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGTAAAGAGAAAGAATGACATCCTTGAGAAAAAATCTTTTGGTTGTACATGTAGTGAAGTTGATGAGAGTCAAACATCAAGTAAAAAAGATGATCTCCATGAAGAGTTGATGGAATGTTTAGACATTTTAAATATAATGGAGGATGTTGATGGAGAGGCTTATTCCAAAATACTGAAACTCTTGCACAGAGATCTTGCTTGGAGAAAGCTATTTTTGCGTATGCCCGATTCAAGGAAGAGAGATTTCATAAATAGTCTTTAGATGTCACTTAGGAATTGTTTTAGGATTATGTCATCTACTTTTTAATATTAGACTTGAACATAGATTTTGTATGTTTGACATTATGGTTTGGGAAAGTTACATAAATTTTCTTTTCTCTTCCATCTTTGTCTGTTTCTTTTCTTCTTATTTTTTTTTCAAACTATTATTTGGTTCATCGTGTATTATTTAGATTGGAGTAGTCAAATGTAAACGATTGTGTAAAAAAAATAAATTATCATGTAGAAAAATCTAAA

mRNA sequence

ATGCTCAATTTTGAGATTTCAGGGTCCGTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCGTCAACAAGACTTATTTCATATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAATGTTGGTGTTGAAGAGAATGATAAAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGTAAAGAGAAAGAATGACATCCTTGAGAAAAAATCTTTTGGTTGTACATGTAGTGAAGTTGATGAGAGTCAAACATCAAGTAAAAAAGATGATCTCCATGAAGAGTTGATGGAATGTTTAGACATTTTAAATATAATGGAGGATGTTGATGGAGAGGCTTATTCCAAAATACTGAAACTCTTGCACAGAGATCTTGCTTGGAGAAAGCTATTTTTGCGTATGCCCGATTCAAGGAAGAGAGATTTCATAAATAGTCTTTAGATGTCACTTAGGAATTGTTTTAGGATTATGTCATCTACTTTTTAATATTAGACTTGAACATAGATTTTGTATGTTTGACATTATGGTTTGGGAAAGTTACATAAATTTTCTTTTCTCTTCCATCTTTGTCTGTTTCTTTTCTTCTTATTTTTTTTTCAAACTATTATTTGGTTCATCGTGTATTATTTAGATTGGAGTAGTCAAATGTAAACGATTGTGTAAAAAAAATAAATTATCATGTAGAAAAATCTAAA

Coding sequence (CDS)

ATGCTCAATTTTGAGATTTCAGGGTCCGTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCGTCAACAAGACTTATTTCATATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAATGTTGGTGTTGAAGAGAATGATAAAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGTAAAGAGAAAGAATGACATCCTTGAGAAAAAATCTTTTGGTTGTACATGTAGTGAAGTTGATGAGAGTCAAACATCAAGTAAAAAAGATGATCTCCATGAAGAGTTGATGGAATGTTTAGACATTTTAAATATAATGGAGGATGTTGATGGAGAGGCTTATTCCAAAATACTGAAACTCTTGCACAGAGATCTTGCTTGGAGAAAGCTATTTTTGCGTATGCCCGATTCAAGGAAGAGAGATTTCATAAATAGTCTTTAG

Protein sequence

MLNFEISGSVNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVEENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSKKDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL

Homology

[Close]

BLAST of MELO3C029648.2 vs. NCBI nr
Match: XP_008461742.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 6.7e-44
Identity = 101/150 (67.33%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 39  GVNACPSTRLISYSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEFGSFFSSFLDVY 98
           GV ACPSTRLIS  E                               DEF SFFS FL++Y
Sbjct: 96  GVIACPSTRLISDFEDENENDVARNTKIGVEENDKGKSKKRVRRNRDEFDSFFSPFLNIY 155

Query: 99  AENVKRKNDILEKKSFGCTCSEVDESQTSSKK-DDLHEELMECLDILNIMEDVDGEAYSK 158
           AEN  R NDILEK+SFGCT SEVDESQTSSKK DDLHEELMECLDIL+ MEDVDG+ YSK
Sbjct: 156 AENAMRNNDILEKRSFGCTSSEVDESQTSSKKDDDLHEELMECLDILHTMEDVDGDTYSK 215

Query: 159 ILKLLHRDLAWRKLFLRMPDSRKRDFINSL 188
           ILKLLHRDL WRKLFLRMPDSRKRDFINSL
Sbjct: 216 ILKLLHRDLDWRKLFLRMPDSRKRDFINSL 245

[Close]

BLAST of MELO3C029648.2 vs. NCBI nr
Match: XP_008466944.1 (PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 7.2e-30
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEXXXXXXXXXXXXXXXX 69
           VNKRAKKFRKSGCPHYEKL+RIFGDTT TGVNACPSTRLIS S XXXXXXXXXXXXXXXX
Sbjct: 64  VNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSXXXXXXXXXXXXXXXXX 123

Query: 70  XXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCS 120
           XXXXXXXXXXXX   DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S
Sbjct: 124 XXXXXXXXXXXXRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS 173

[Close]

BLAST of MELO3C029648.2 vs. NCBI nr
Match: XP_016901848.1 (PREDICTED: uncharacterized protein LOC107991434 [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 9.3e-30
Identity = 72/110 (65.45%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEXXXXXXXXXXXXXXXX 69
           VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVN CPSTR IS SE                
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNVCPSTRFISDSEDENKNDVASNTNVGVE 85

Query: 70  XXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCS 120
                          DEFGSFFSSFLDVYAENVKRKNDI EK+SFGCT S
Sbjct: 86  ENDKGKSKKGVRRKKDEFGSFFSSFLDVYAENVKRKNDIFEKRSFGCTSS 135

[Close]

BLAST of MELO3C029648.2 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 8.8e-28
Identity = 80/186 (43.01%), Postives = 106/186 (56.99%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDT-TTTGVNACPSTRLISYS------EXXXXXXXXX 69
           VNK AKKF+KSGCPHY KL+ I+GDT  TT ++A PST+L S S      E         
Sbjct: 144 VNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNED 203

Query: 70  XXXXXXXXXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVD 129
                                 +      SSF + Y EN+KR+NDILE + FG +  E  
Sbjct: 204 YGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF- 263

Query: 130 ESQTSSK-KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKR 188
            S+TSSK +D   E+L +C+ ILN M D+D +AY+K+LK L  D  WRK FL +P+SR+R
Sbjct: 264 -SETSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRR 323

[Close]

BLAST of MELO3C029648.2 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 8.8e-28
Identity = 80/186 (43.01%), Postives = 106/186 (56.99%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDT-TTTGVNACPSTRLISYS------EXXXXXXXXX 69
           VNK AKKF+KSGCPHY KL+ I+GDT  TT ++A PST+L S S      E         
Sbjct: 118 VNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNED 177

Query: 70  XXXXXXXXXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVD 129
                                 +      SSF + Y EN+KR+NDILE + FG +  E  
Sbjct: 178 YGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF- 237

Query: 130 ESQTSSK-KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKR 188
            S+TSSK +D   E+L +C+ ILN M D+D +AY+K+LK L  D  WRK FL +P+SR+R
Sbjct: 238 -SETSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRR 297

[Close]

BLAST of MELO3C029648.2 vs. TrEMBL
Match: tr|A0A1S3CFA7|A0A1S3CFA7_CUCME (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44
Identity = 101/150 (67.33%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 39  GVNACPSTRLISYSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEFGSFFSSFLDVY 98
           GV ACPSTRLIS  E                               DEF SFFS FL++Y
Sbjct: 96  GVIACPSTRLISDFEDENENDVARNTKIGVEENDKGKSKKRVRRNRDEFDSFFSPFLNIY 155

Query: 99  AENVKRKNDILEKKSFGCTCSEVDESQTSSKK-DDLHEELMECLDILNIMEDVDGEAYSK 158
           AEN  R NDILEK+SFGCT SEVDESQTSSKK DDLHEELMECLDIL+ MEDVDG+ YSK
Sbjct: 156 AENAMRNNDILEKRSFGCTSSEVDESQTSSKKDDDLHEELMECLDILHTMEDVDGDTYSK 215

Query: 159 ILKLLHRDLAWRKLFLRMPDSRKRDFINSL 188
           ILKLLHRDL WRKLFLRMPDSRKRDFINSL
Sbjct: 216 ILKLLHRDLDWRKLFLRMPDSRKRDFINSL 245

[Close]

BLAST of MELO3C029648.2 vs. TrEMBL
Match: tr|A0A1S3CTN1|A0A1S3CTN1_CUCME (uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.7e-30
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEXXXXXXXXXXXXXXXX 69
           VNKRAKKFRKSGCPHYEKL+RIFGDTT TGVNACPSTRLIS S XXXXXXXXXXXXXXXX
Sbjct: 64  VNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSXXXXXXXXXXXXXXXXX 123

Query: 70  XXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCS 120
           XXXXXXXXXXXX   DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S
Sbjct: 124 XXXXXXXXXXXXRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS 173

[Close]

BLAST of MELO3C029648.2 vs. TrEMBL
Match: tr|A0A1S4E0U7|A0A1S4E0U7_CUCME (uncharacterized protein LOC107991434 OS=Cucumis melo OX=3656 GN=LOC107991434 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.2e-30
Identity = 72/110 (65.45%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEXXXXXXXXXXXXXXXX 69
           VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVN CPSTR IS SE                
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNVCPSTRFISDSEDENKNDVASNTNVGVE 85

Query: 70  XXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCS 120
                          DEFGSFFSSFLDVYAENVKRKNDI EK+SFGCT S
Sbjct: 86  ENDKGKSKKGVRRKKDEFGSFFSSFLDVYAENVKRKNDIFEKRSFGCTSS 135

[Close]

BLAST of MELO3C029648.2 vs. TrEMBL
Match: tr|A0A1S4DUG7|A0A1S4DUG7_CUCME (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.8e-28
Identity = 80/186 (43.01%), Postives = 106/186 (56.99%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDT-TTTGVNACPSTRLISYS------EXXXXXXXXX 69
           VNK AKKF+KSGCPHY KL+ I+GDT  TT ++A PST+L S S      E         
Sbjct: 118 VNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNED 177

Query: 70  XXXXXXXXXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVD 129
                                 +      SSF + Y EN+KR+NDILE + FG +  E  
Sbjct: 178 YGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF- 237

Query: 130 ESQTSSK-KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKR 188
            S+TSSK +D   E+L +C+ ILN M D+D +AY+K+LK L  D  WRK FL +P+SR+R
Sbjct: 238 -SETSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRR 297

[Close]

BLAST of MELO3C029648.2 vs. TrEMBL
Match: tr|A0A1S3B8P1|A0A1S3B8P1_CUCME (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.8e-28
Identity = 80/186 (43.01%), Postives = 106/186 (56.99%), Query Frame = 0


Query: 10  VNKRAKKFRKSGCPHYEKLVRIFGDT-TTTGVNACPSTRLISYS------EXXXXXXXXX 69
           VNK AKKF+KSGCPHY KL+ I+GDT  TT ++A PST+L S S      E         
Sbjct: 144 VNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNED 203

Query: 70  XXXXXXXXXXXXXXXXXXXXXXDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVD 129
                                 +      SSF + Y EN+KR+NDILE + FG +  E  
Sbjct: 204 YGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF- 263

Query: 130 ESQTSSK-KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKR 188
            S+TSSK +D   E+L +C+ ILN M D+D +AY+K+LK L  D  WRK FL +P+SR+R
Sbjct: 264 -SETSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRR 323

The following BLAST results are available for this feature:

BLAST of MELO3C029648.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461742.1	6.7e-44	67.33	PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo]	[more]
XP_008466944.1	7.2e-30	90.91	PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo]	[more]
XP_016901848.1	9.3e-30	65.45	PREDICTED: uncharacterized protein LOC107991434 [Cucumis melo]	[more]
XP_008443406.1	8.8e-28	43.01	PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]	[more]
XP_016899632.1	8.8e-28	43.01	PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumi...	[more]

BLAST of MELO3C029648.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C029648.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C029648.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CFA7\|A0A1S3CFA7_CUCME	4.4e-44	67.33	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S3CTN1\|A0A1S3CTN1_CUCME	4.7e-30	90.91	uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=...	[more]
tr\|A0A1S4E0U7\|A0A1S4E0U7_CUCME	6.2e-30	65.45	uncharacterized protein LOC107991434 OS=Cucumis melo OX=3656 GN=LOC107991434 PE=...	[more]
tr\|A0A1S4DUG7\|A0A1S4DUG7_CUCME	5.8e-28	43.01	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX...	[more]
tr\|A0A1S3B8P1\|A0A1S3B8P1_CUCME	5.8e-28	43.01	uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029648.2.1	MELO3C029648.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..80

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C029648.2	Cucumber (Chinese Long) v3	cucmedB052
MELO3C029648.2	Cucumber (Chinese Long) v3	cucmedB185
MELO3C029648.2	Watermelon (97103) v2	medwmbB242
MELO3C029648.2	Watermelon (97103) v2	medwmbB251
MELO3C029648.2	Wax gourd	medwgoB286
MELO3C029648.2	Wax gourd	medwgoB290
MELO3C029648.2	Cucumber (Gy14) v2	cgybmedB045
MELO3C029648.2	Cucumber (Gy14) v2	cgybmedB162
MELO3C029648.2	Cucumber (Gy14) v1	cgymedB416
MELO3C029648.2	Cucumber (Gy14) v1	cgymedB511
MELO3C029648.2	Cucurbita maxima (Rimu)	cmamedB023
MELO3C029648.2	Cucurbita maxima (Rimu)	cmamedB060
MELO3C029648.2	Cucurbita maxima (Rimu)	cmamedB112
MELO3C029648.2	Cucurbita maxima (Rimu)	cmamedB469
MELO3C029648.2	Cucurbita moschata (Rifu)	cmomedB011
MELO3C029648.2	Cucurbita moschata (Rifu)	cmomedB052
MELO3C029648.2	Cucurbita moschata (Rifu)	cmomedB105
MELO3C029648.2	Cucurbita pepo (Zucchini)	cpemedB392
MELO3C029648.2	Cucurbita pepo (Zucchini)	cpemedB604
MELO3C029648.2	Cucurbita pepo (Zucchini)	cpemedB734
MELO3C029648.2	Cucurbita pepo (Zucchini)	cpemedB851
MELO3C029648.2	Wild cucumber (PI 183967)	cpimedB042
MELO3C029648.2	Wild cucumber (PI 183967)	cpimedB181
MELO3C029648.2	Cucumber (Chinese Long) v2	cumedB038
MELO3C029648.2	Cucumber (Chinese Long) v2	cumedB182
MELO3C029648.2	Melon (DHL92) v3.6.1	medmedB102
MELO3C029648.2	Bottle gourd (USVL1VR-Ls)	lsimedB108
MELO3C029648.2	Bottle gourd (USVL1VR-Ls)	lsimedB309
MELO3C029648.2	Bottle gourd (USVL1VR-Ls)	lsimedB425
MELO3C029648.2	Watermelon (Charleston Gray)	medwcgB221
MELO3C029648.2	Watermelon (Charleston Gray)	medwcgB242
MELO3C029648.2	Watermelon (Charleston Gray)	medwcgB249
MELO3C029648.2	Watermelon (97103) v1	medwmB268
MELO3C029648.2	Watermelon (97103) v1	medwmB288
MELO3C029648.2	Silver-seed gourd	carmedB0135
MELO3C029648.2	Silver-seed gourd	carmedB0636
MELO3C029648.2	Silver-seed gourd	carmedB0675
MELO3C029648.2	Silver-seed gourd	carmedB0894