MELO3C029624.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029624.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 14544146 .. 14547542 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTTGATGAGCATTGCAAGGAGTTTGAGAAGGAGATAAAAAATTTAAGTCCTTTGGAAGAAGAGGCGCCAAAGCCAAAAAAAAGAGAGAAAGATTACAATGAAAAAGAAGGTTTTGAGAGCGCATTTTGAAAATAGGTGAGCTGAAAAGGTGAAAAGAAAGCCTCAAGAAGATAAATGGGAAGAGAGCGAGGAAAGTGAATTAGAAGGACCACTCTCCTTTTCCCAAGTTAGCAAACAGTTGATGATAGAAAAGAGGCTCTATCCATACCAAGGAACCATGCCAGGGTTCCTCATGGCAGCCATCTAGGTGTTTAGATGGAAGAGGTTTTTCCAAGGGGTGACCACAATAAGACCTGACATAGTGAAGATGTTCTACAAAGGATATATCAATGAAGAAGAACGTTGTGCCATGGTTAAAGGGAAAAAGTAGATTGCGAATGAAATATGACATGCAATTTTCAGAAACTCACAAAAGCGAGATCTAGAAGACGCGTTGAAGATACACTACAAAAATATGGGCTTTTAATTGCTTTGGAGGATAGCCTTTTTACAATGGGCTATTATTAAAAAGGAAAAAAAGGGGGAAAATTAATAAAACCGGCCAAGCCCAAAATAAAAAAAGAAAAAGAGGGAAAAAAAGGGGAACGATAATTATATTGCACAAAACGCCGAACGAAGAAGAAGTTGTGAAGAACCCTACTCGATCGACCGCGAGATCTCTGTTCGTCTCTCTACAGTCGATCGACGGCGGTTCTCGAGAAGGTCGTTCAACCGACGACGGTCGTTCAATCGAAAACCAAAGCAAAAAATCCCTCCCTCTTTCGATAGTCGTTCAACCGATGACGACGTCCTCTCTCCTGGGCGGGTAAGTATCTTCTCGACTTTCTCTATTTCATTGTTAAGATAGTGATAGTGTCGGTGATTTCATTGTTTCTTTAGCTTAATACCCCAGTAAAGTGTTGTTTGCGAGTCGAAATCATGCTGTGGACACAAGTTTCGGTTTAGGCTTTTATAGATAACCTCTCCTGTTACTTTTCTTTTTTTCTCACTAATCTTAAACACAGTAGTTGAATTTTATCTATTTAACAGAACATCTTTCAATTTTTTTAATATGTTTAGCAATTGAGAATGACAAAACAACTTTAAATTTCCTATTTTTGTTGGTTTTAACTCGCTATTTGAAACTGACATTCGGATTTTTTTTATCTCTGCATTCTACTTCAACTCTACCACCTGTGAACAAAATAGTATAACCTTACAAATCATTATTGTCAATTGAAAAAAAAAATACAACATGGGATGAAATGATGGTTGGTTCTTTTAAATCATTGATTTCTGGCTAACACTCTTCTTATCTTTTATCCTTAAATAGAAATAACTTTGCAAAGGTTCAAACACAAGATCTAAGGGACTTGGAACTGGAGTTGAATAGAAATCACTTCTTGTACCACTTATTTATGAGTTTCATGGTAAAGACAGAATCACATAATTGGGATTGAGATTGGGATAGGGACTCAGTTTCTTCATGAGACAGTTACGAGAGCCACACAATTTTCTTCTCTTCTCATCCTCAATAACTCTTTTTAAAAATATATATATCTTGTTTATTTCAGTTACTTTTGGATAATTAAAGGGTCATTTTCTTTTATCAAATATTTACTTTGGAGTCATTTTTTTAAATATTTAGTTGTTTCTTCCATCTGTTTGTTGATCATTATTGCTGCCAAATTTGTTCATTTGAGTTTGTGTGTTATTTCCTATCAAGGAAGTAGTTTATATTCATTCTAGTGGATGTTTATAATAATAGTAGGAGTTGGACCATTTACTTTTTTAGAATGGCAAGTGGTTACATTCTATTTCTGCTCTTTTTTAATAAAGTACCTTTAAGTACAACTTCCTTTGGTTGTATATTAATGTTTTAGTTGTCGGCAGGTTTTGATGTTATGAGACTTGAGTGAAGCATGATTATTTAATATGGATGTTTAGTTAAGTAGCTAGTTACCGTTTTTTTAACGACTTACTATTACCCTCTTCTTCTCCTTACTTTTGATCTTTGCTTGTTGGTTATTAGGAGAATTTTTTCATTTGAGTTTCTTTACTATTTGCTATCAAAGAAGTAGCATGATTATTTAATATGGATGTTTATGATAATAGTAGGAGTAGGACCTTTTGACTTTTTAGACCTTTGTTTGAAAGTATCATCATTGGAGTTGGATTCTTGATTGCACAAAGTCTTAAATCGTAGTATGTAATTGAGTTGCTTGGTAACCTTGTTGCTTCATAGTTACTGAATTTTGAACTTGGAATGGCTAGTGGTTATGTTATATTTCTGGTCTATTTGAAAAAGGTACCTTTAAGTACAACTTCCTTTGGTCGTAAATTAATGTTTTAGTTGTCCGAAGGTTTTGATATTAGGAGACTTGAGTCAAGCATGAGTCTTTAGATCTTGAGGCTTAGTCAAGTAAATAGTTACTCTTTTTTTAACAACTTAGTGTTTCCCTCTTCTTCTCCTTACTTTTGATCTTTGCTTGTTGGTTATTAGGAGAATTCTTTCATTTGAGTTTGTTTTATATTTTCTATCAAAGAAGTAGTTTATAGTCATTCTAGTGTATGTTTATGATAATAGTAGGAGTAGGACCTTTTGAGTTTTTAGACCTTTGTTTGAAAGTATCATCATTGGACTCGGATTGTTGATTGCACAAAGTCATCAATCATAGTATGTAATTGAGTTGCTTGGTAACCTTGTTGCTTCATAGTTACTGAATTTTTAACTTCGAATGGCTAGTGGTTATGTTCTATTTATGCTCTATTTGGAAAAAGTACCTTTAAGTACAACTTCCTTTGGTCGTAAATAAATGTTTTAGTTGTCCGAAGATTTTGATGGTCCTCAAATGATCCTAATGTTACTGTTCACCATGTTCCTCTCGGTCCTCATGCTATTAGAGTTTGGGTGGACTTGCCAAAGAAGTCGGATGCATTTTTATGGAGACCTAACTCAGAGATGACATACATTGAGGATGCTGTTGGAAGCACAGTAGCATGGCCTCTTGACAAAGCTATTTTAAGTATGTACATCCTTAACTATTAACTTGTAGCTTGCTTTTTCAACTAAAATCTTTGTGTATAAACATAGTTAGTCATTTAGTTTTATTCATAATTTTTTTTGTAGGTTGATGAAAGAACAATTGTACAAAGTCCAAGAATGTCATGACCAAGAATTGTACAAAGCCCTAACCTTTTTGTAACTAATGGATAGTATAGGTTGATCATCGTGTTGGATTAGATGATATATTAGTCACTATCTTTTGTGTGAATACTTAACCATAGAAATAGCATTTGTGCAGGGCATTATAAATCTTTTGAGTTGTATTTTGTGCAGGGCAATATGTAA

mRNA sequence

ATGACATTTGATGAGCATTGCAAGGAGTTTGAGAAGGAGATAAAAAATTTAAGTCCTTTGGAAGAAGAGGCGCCAAAGCCAAAAAAAAGAGAGAAAGATTACAATGAAAAAGAAGGGGTGACCACAATAAGACCTGACATAGTGAAGATGTTCTACAAAGGATATATCAATGAAGAAGAACGTTGTGCCATGGTTAAAGGGAAAAAGAAAAAAAGGGGGAAAATTAATAAAACCGGCCAAGCCCAAAATAAAAAAAGAAAAAGAGGGAAAAAAAGGGGAACGATAATTATATTGCACAAAACGCCGAACGAAGAAGAAGTTGTGAAGAACCCTACTCGATCGACCGCGAGATCTCTGTTCGTCTCTCTACAGTCGATCGACGGCGGTTCTCGAGAAGGTCGTTCAACCGACGACGGTCGTTCAATCGAAAACCAAAGCAAAAAATCCCTCCCTCTTTCGATAGTCGTTCAACCGATGACGACGTCCTCTCTCCTGGGCGGAAATAACTTTGCAAAGGTTCAAACACAAGATCTAAGGGACTTGGAACTGGAGTTGAATAGAAATCACTTCTTGTACCACTTATTTATGAGTTTCATGGTTGATGAAAGAACAATTGGCAATATGTAA

Coding sequence (CDS)

ATGACATTTGATGAGCATTGCAAGGAGTTTGAGAAGGAGATAAAAAATTTAAGTCCTTTGGAAGAAGAGGCGCCAAAGCCAAAAAAAAGAGAGAAAGATTACAATGAAAAAGAAGGGGTGACCACAATAAGACCTGACATAGTGAAGATGTTCTACAAAGGATATATCAATGAAGAAGAACGTTGTGCCATGGTTAAAGGGAAAAAGAAAAAAAGGGGGAAAATTAATAAAACCGGCCAAGCCCAAAATAAAAAAAGAAAAAGAGGGAAAAAAAGGGGAACGATAATTATATTGCACAAAACGCCGAACGAAGAAGAAGTTGTGAAGAACCCTACTCGATCGACCGCGAGATCTCTGTTCGTCTCTCTACAGTCGATCGACGGCGGTTCTCGAGAAGGTCGTTCAACCGACGACGGTCGTTCAATCGAAAACCAAAGCAAAAAATCCCTCCCTCTTTCGATAGTCGTTCAACCGATGACGACGTCCTCTCTCCTGGGCGGAAATAACTTTGCAAAGGTTCAAACACAAGATCTAAGGGACTTGGAACTGGAGTTGAATAGAAATCACTTCTTGTACCACTTATTTATGAGTTTCATGGTTGATGAAAGAACAATTGGCAATATGTAA

Protein sequence

MTFDEHCKEFEKEIKNLSPLEEEAPKPKKREKDYNEKEGVTTIRPDIVKMFYKGYINEEERCAMVKGKKKKRGKINKTGQAQNKKRKRGKKRGTIIILHKTPNEEEVVKNPTRSTARSLFVSLQSIDGGSREGRSTDDGRSIENQSKKSLPLSIVVQPMTTSSLLGGNNFAKVQTQDLRDLELELNRNHFLYHLFMSFMVDERTIGNM
Homology
[Close]
BLAST of MELO3C029624.2 vs. NCBI nr
Match: KGN58104.1 (hypothetical protein Csa_3G511970 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 6.1e-06
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 4  DEHCKEFEKEIKNLSPLEEEAPKPKKREKDYNEKEGVTTIRPDIVKMFYKGYINEEERCA 63
          +E+C+EFEKEI  LS LE+EA   KK              +PD+VK FYKGYINEE++  
Sbjct: 2  EEYCEEFEKEISGLSHLEDEAKTCKK--------------KPDVVKFFYKGYINEEQQYV 54

Query: 64 MVKGKKK 71
          M+KG+K+
Sbjct: 62 MIKGQKQ 54

[Close]
BLAST of MELO3C029624.2 vs. TrEMBL
Match: tr|A0A0A0LAY9|A0A0A0LAY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G511970 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 4  DEHCKEFEKEIKNLSPLEEEAPKPKKREKDYNEKEGVTTIRPDIVKMFYKGYINEEERCA 63
          +E+C+EFEKEI  LS LE+EA   KK              +PD+VK FYKGYINEE++  
Sbjct: 2  EEYCEEFEKEISGLSHLEDEAKTCKK--------------KPDVVKFFYKGYINEEQQYV 54

Query: 64 MVKGKKK 71
          M+KG+K+
Sbjct: 62 MIKGQKQ 54

The following BLAST results are available for this feature:
BLAST of MELO3C029624.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58104.16.1e-0649.25hypothetical protein Csa_3G511970 [Cucumis sativus][more]
BLAST of MELO3C029624.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C029624.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029624.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAY9|A0A0A0LAY9_CUCSA4.1e-0649.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G511970 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029624.2.1MELO3C029624.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..146

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029624.2Cucumber (Gy14) v2cgybmedB034
MELO3C029624.2Cucumber (Gy14) v1cgymedB646
MELO3C029624.2Cucurbita maxima (Rimu)cmamedB075
MELO3C029624.2Cucurbita maxima (Rimu)cmamedB114
MELO3C029624.2Cucurbita moschata (Rifu)cmomedB068
MELO3C029624.2Cucurbita moschata (Rifu)cmomedB107
MELO3C029624.2Wild cucumber (PI 183967)cpimedB038
MELO3C029624.2Cucumber (Chinese Long) v2cumedB035
MELO3C029624.2Bottle gourd (USVL1VR-Ls)lsimedB420
MELO3C029624.2Watermelon (97103) v1medwmB261
MELO3C029624.2Silver-seed gourdcarmedB0906
MELO3C029624.2Cucumber (Chinese Long) v3cucmedB041