MELO3C029601.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029601.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 11885792 .. 11886277 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATGACCAATGTGTTGGAAGCTAAAATAAAAGTAAGAGAGAATCTCAGTGACTTGTTGTCGGCAACTATTGAACTGAAGGATGAAGTCCATGGCAATATTTTTCTTAATTTTGATGATATCAAGGTTATCAAAGAGCCTGCAGCCATTCAGAACACTCTTTTTATCAGGGATTTTACTAATCCAGTTGATTTAGTACGAATAGATCAAGCCTTAAAAGATGAAGGAATAGATTCGCAAGTTCTGAAACCGGAATGGGCATTTCTCAATTCGACCCATTCAAAACCAGCTTTTGCAAGGAATCCTTTCAACCACGGTCAGTGCCTACAGACAGCACAAGCTTGCCCGTCTGGTGAACCATCCTCATCCCGCTGGAACTCTTCTCCTGCCGCATTAAAGTTGAAAAAGAAATTCAAATTAGGAGGGAATAATCTTGCAGAAGTCAAAGAGGCACTGATAAGGAGGAGAGACTTTTTCGGCTAG

mRNA sequence

ATGAATATGACCAATGTGTTGGAAGCTAAAATAAAAGTAAGAGAGAATCTCAGTGACTTGTTGTCGGCAACTATTGAACTGAAGGATGAAGTCCATGGCAATATTTTTCTTAATTTTGATGATATCAAGGTTATCAAAGAGCCTGCAGCCATTCAGAACACTCTTTTTATCAGGGATTTTACTAATCCAGTTGATTTAGTACGAATAGATCAAGCCTTAAAAGATGAAGGAATAGATTCGCAAGTTCTGAAACCGGAATGGGCATTTCTCAATTCGACCCATTCAAAACCAGCTTTTGCAAGGAATCCTTTCAACCACGGTCAGTGCCTACAGACAGCACAAGCTTGCCCGTCTGGTGAACCATCCTCATCCCGCTGGAACTCTTCTCCTGCCGCATTAAAGTTGAAAAAGAAATTCAAATTAGGAGGGAATAATCTTGCAGAAGTCAAAGAGGCACTGATAAGGAGGAGAGACTTTTTCGGCTAG

Coding sequence (CDS)

ATGAATATGACCAATGTGTTGGAAGCTAAAATAAAAGTAAGAGAGAATCTCAGTGACTTGTTGTCGGCAACTATTGAACTGAAGGATGAAGTCCATGGCAATATTTTTCTTAATTTTGATGATATCAAGGTTATCAAAGAGCCTGCAGCCATTCAGAACACTCTTTTTATCAGGGATTTTACTAATCCAGTTGATTTAGTACGAATAGATCAAGCCTTAAAAGATGAAGGAATAGATTCGCAAGTTCTGAAACCGGAATGGGCATTTCTCAATTCGACCCATTCAAAACCAGCTTTTGCAAGGAATCCTTTCAACCACGGTCAGTGCCTACAGACAGCACAAGCTTGCCCGTCTGGTGAACCATCCTCATCCCGCTGGAACTCTTCTCCTGCCGCATTAAAGTTGAAAAAGAAATTCAAATTAGGAGGGAATAATCTTGCAGAAGTCAAAGAGGCACTGATAAGGAGGAGAGACTTTTTCGGCTAG

Protein sequence

MNMTNVLEAKIKVRENLSDLLSATIELKDEVHGNIFLNFDDIKVIKEPAAIQNTLFIRDFTNPVDLVRIDQALKDEGIDSQVLKPEWAFLNSTHSKPAFARNPFNHGQCLQTAQACPSGEPSSSRWNSSPAALKLKKKFKLGGNNLAEVKEALIRRRDFFG
Homology
[Close]
BLAST of MELO3C029601.2 vs. NCBI nr
Match: XP_016903436.1 (PREDICTED: uncharacterized protein LOC107992196 [Cucumis melo] >XP_016903437.1 PREDICTED: uncharacterized protein LOC107992196 [Cucumis melo] >XP_016903438.1 PREDICTED: uncharacterized protein LOC107992196 [Cucumis melo] >XP_016903439.1 PREDICTED: uncharacterized protein LOC107992196 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 6.0e-09
Identity = 40/119 (33.61%), Postives = 56/119 (47.06%), Query Frame = 0 

Query: 3   MTNVLEAKIKVRENLSDLLSATIELKDEVHGNIFLNFDDIKVIKEPAAIQN--------- 62
           M N  +AKIKV +NL   L AT+EL+DE  GNIF NF D + +++P  I+          
Sbjct: 1   MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGXXXXXXXXX 60

Query: 63  ----------------------TLFIRDFTNPVDLVRIDQALKDEGIDSQVLKPEWAFL 91
                                    ++DF NP+DL+R++Q L DE  D      +W FL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXLKDFANPIDLMRLNQVLLDEEEDLNTSNSKWRFL 119

[Close]
BLAST of MELO3C029601.2 vs. TrEMBL
Match: tr|A0A1S4E5E1|A0A1S4E5E1_CUCME (uncharacterized protein LOC107992196 OS=Cucumis melo OX=3656 GN=LOC107992196 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.0e-09
Identity = 40/119 (33.61%), Postives = 56/119 (47.06%), Query Frame = 0 

Query: 3   MTNVLEAKIKVRENLSDLLSATIELKDEVHGNIFLNFDDIKVIKEPAAIQN--------- 62
           M N  +AKIKV +NL   L AT+EL+DE  GNIF NF D + +++P  I+          
Sbjct: 1   MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGXXXXXXXXX 60

Query: 63  ----------------------TLFIRDFTNPVDLVRIDQALKDEGIDSQVLKPEWAFL 91
                                    ++DF NP+DL+R++Q L DE  D      +W FL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXLKDFANPIDLMRLNQVLLDEEEDLNTSNSKWRFL 119

The following BLAST results are available for this feature:
BLAST of MELO3C029601.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903436.16.0e-0933.61PREDICTED: uncharacterized protein LOC107992196 [Cucumis melo] >XP_016903437.1 P... [more]
BLAST of MELO3C029601.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C029601.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029601.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E5E1|A0A1S4E5E1_CUCME4.0e-0933.61uncharacterized protein LOC107992196 OS=Cucumis melo OX=3656 GN=LOC107992196 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029601.2.1MELO3C029601.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029601.2Silver-seed gourdcarmedB0545
MELO3C029601.2Silver-seed gourdcarmedB0952
MELO3C029601.2Cucumber (Chinese Long) v3cucmedB041
MELO3C029601.2Watermelon (97103) v2medwmbB229
MELO3C029601.2Wax gourdmedwgoB310
MELO3C029601.2Cucumber (Gy14) v2cgybmedB034
MELO3C029601.2Cucumber (Gy14) v1cgymedB575
MELO3C029601.2Cucurbita maxima (Rimu)cmamedB072
MELO3C029601.2Cucurbita maxima (Rimu)cmamedB114
MELO3C029601.2Cucurbita moschata (Rifu)cmomedB064
MELO3C029601.2Cucurbita moschata (Rifu)cmomedB107
MELO3C029601.2Cucurbita pepo (Zucchini)cpemedB008
MELO3C029601.2Cucurbita pepo (Zucchini)cpemedB390
MELO3C029601.2Wild cucumber (PI 183967)cpimedB038
MELO3C029601.2Cucumber (Chinese Long) v2cumedB035
MELO3C029601.2Bottle gourd (USVL1VR-Ls)lsimedB420
MELO3C029601.2Watermelon (Charleston Gray)medwcgB230
MELO3C029601.2Watermelon (97103) v1medwmB254