MELO3C029538.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029538.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionProtein Ycf2
Locationchr02 : 23907054 .. 23908396 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCAATGTACGTGATATTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAAAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCATTGACAAACTTGGGATTTTCTATCCCGTGTAAGATCGGTTCAGGATCATGGAATCCTTTTTTATCAGATAGGAAGGGCTGTTGCGCAAAATGTACTTCTAAGTAATTGCTCCATAGATCCTATATCTATCTATATGATGAAGAAATCATGTAACGAAGAGGGTTCTTATTTGTACAATTGGTACTTCGAACTTGAAACTAGCATGAAGGAATTAACGATACTTCTTTATGTTTTGAGTTGTTCTATCGGATCGATCATTCAAGACCTTTGGTTTCTACCCGAACCCGATGAAAAAAATAGGATCACTTCTTAGGGACTTGTTGAGAATAATTATGATCTGGTTCATGGCCTATTAGAAGTAGAAGGCGCTTTGTTGGGATCCTCACAGATAGAAAAAGATTGCAGTCGATTTGATAAGGATCAAGTGACATTGCTTCTTCGACTTGGACTTATGAATCCCTTAGATATGATACAAAATGGATATTGTTCTATCATTGGCCAGAGATTTCTTTATCAACAATACAAATTGGAGTTTGAAGAAGGGGAATGAGTCCTCAACCTGCAACAGATAGAGGAGAATTTATTTAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTAATTGTATCGAAAGGCTCAATGAATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCAGATCATTTATGATGAAGATGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCATGCAGTACCAGACACGAGATAGATCTTTCAAAGAACAAGGCTTTTTTTGAATAAGCCAATTCATTTATGATCTTGTAGATCCACTCTTTTTCCTATTCAAAGATCATCCTTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATATCAAAGAGGTTGCTTCCTTCCCAAATATATTGTTCTATATCTCTACATAAACCCTTGTTTATCGAGAAAACACAAGAAAAGTACTTCTGATTGTTGATTTATCGCCAGAGATGGCTCAGAACCAATAGTTCATTATCTAATGGATTTTTCTGTTCTAATACTCCATCTGAGAGTTATCAGTATTTATCAAATATGTTCCTATATAACGAAACACTATTAGATCAAATGACAAAGACATTGTTGAGAAAAAGATGGCTTTTCCCGAATGAAATGGTTGTTTTGCTATCTGTTACAATAACGAATCATTG

mRNA sequence

ATGGGTTCCAATGTACGTGATATTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAAAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCATTGACAAACTTGGGATTTTCTATCCCGTATAGGAAGGGCTGTTGCGCAAAATGTACTTCTAAGTAATTGCTCCATAGATCCTATATCTATCTATATGATGAAGAAATCATGTAACGAAGAGGGTTCTTATTTGTACAATTGGTACTTCGAACTTGAAACTAGCATGAAGGAATTAACGATACTTCTTTATGTTTTGAGTTGTTCTATCGGATCGATCATTCAAGACCTTTGGTTTCTACCCGAACCCGATGAAAAAAATAGGATCACTTCTTAGGGACTTGTTGAGAATAATTATGATCTGGTTCATGGCCTATTAGAAGTAGAAGGCGCTTTGTTGGGATCCTCACAGATAGAAAAAGATTGCAGTCGATTTGATAAGGATCAAGTGACATTGCTTCTTCGACTTGGACTTATGAATCCCTTAGATATGATACAAAATGGATATTGTTCTATCATTGGCCAGAGATTTCTTTATCAACAATACAAATTGGAGTTTGAAGAAGGGGAATGAGTCCTCAACCTGCAACAGATAGAGGAGAATTTATTTAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTAATTGTATCGAAAGGCTCAATGAATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCAGATCATTTATGATGAAGATGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCATGCAGTACCAGACACGAGATAGATCTTTCAAAGAACAAGGCTTTTTTTGAATAAGCCAATTCATTTATGATCTTGTAGATCCACTCTTTTTCCTATTCAAAGATCATCCTTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATATCAAAGAGGTTGCTTCCTTCCCAAATATATTGTTCTATATCTCTACATAAACCCTTGTTTATCGAGAAAACACAAGAAAAGTACTTCTGATTGTTGATTTATCGCCAGAGATGGCTCAGAACCAATAGTTCATTATCTAATGGATTTTTCTGTTCTAATACTCCATCTGAGAGTTATCAGTATTTATCAAATATGTTCCTATATAACGAAACACTATTAGATCAAATGACAAAGACATTGTTGAGAAAAAGATGGCTTTTCCCGAATGAAATGGTTGTTTTGCTATCTGTTACAATAACGAATCATTG

Coding sequence (CDS)

ATGATGAAGAAATCATGTAACGAAGAGGGTTCTTATTTGTACAATTGGTACTTCGAACTTGAAACTAGCATGAAGGAATTAACGATACTTCTTTATGTTTTGAGTTGTTCTATCGGATCGATCATTCAAGACCTTTGGTTTCTACCCGAACCCGATGAAAAAAATAGGATCACTTCTTAG

Protein sequence

MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
Homology
[Close]
BLAST of MELO3C029538.2 vs. NCBI nr
Match: YP_009346523.1 (ycf2 (chloroplast) [Cucumis x hytivus] >YP_009346537.1 photosystem I assembly protein ycf2 (chloroplast) [Cucumis x hytivus] >AOW71134.1 ycf2 (chloroplast) [Cucumis x hytivus] >AOW71148.1 photosystem I assembly protein ycf2 (chloroplast) [Cucumis x hytivus])

HSP 1 Score: 105.5 bits (262), Expect = 6.2e-20
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE GSYLYNWYF+LETSMK+LTILLY+LSCS GS++QDLW LP PDEKN ITS
Sbjct: 1629 MKKKSCNEGGSYLYNWYFKLETSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITS 1687

[Close]
BLAST of MELO3C029538.2 vs. NCBI nr
Match: ARC98938.1 (hypothetical protein RF2 (plastid) [Rubus corchorifolius])

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-19
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNEEGSYLY WYFEL TSMK+LTILLY+LSCS GS+ QDLW LP PDEKN ITS
Sbjct: 1921 MKKKSCNEEGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITS 1979

[Close]
BLAST of MELO3C029538.2 vs. NCBI nr
Match: ARC99172.1 (hypothetical protein RF2 (plastid) [Rubus niveus])

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-19
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNEEGSYLY WYFEL TSMK+LTILLY+LSCS GS+ QDLW LP PDEKN ITS
Sbjct: 1921 MKKKSCNEEGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITS 1979

[Close]
BLAST of MELO3C029538.2 vs. NCBI nr
Match: ARD03579.1 (hypothetical protein RF2 (plastid) [Rubus fockeanus])

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-19
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNEEGSYLY WYFEL TSMK+LTILLY+LSCS GS+ QDLW LP PDEKN ITS
Sbjct: 1921 MKKKSCNEEGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITS 1979

[Close]
BLAST of MELO3C029538.2 vs. NCBI nr
Match: YP_009495653.1 (Ycf2 (chloroplast) [Rubus takesimensis] >YP_009495671.1 Ycf2 (chloroplast) [Rubus takesimensis] >AWQ64384.1 Ycf2 (chloroplast) [Rubus takesimensis] >AWQ64401.1 Ycf2 (chloroplast) [Rubus takesimensis])

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-19
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNEEGSYLY WYFEL TSMK+LTILLY+LSCS GS+ QDLW LP PDEKN ITS
Sbjct: 1921 MKKKSCNEEGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITS 1979

[Close]
BLAST of MELO3C029538.2 vs. TAIR10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-21
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Sbjct: 1933 MKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPVPDEKNRITS 1991

[Close]
BLAST of MELO3C029538.2 vs. TAIR10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-21
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Sbjct: 1933 MKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPVPDEKNRITS 1991

[Close]
BLAST of MELO3C029538.2 vs. Swiss-Prot
Match: sp|Q2QD30|YCF2_CUCSA (Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-21
Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE GSYLYNWYFELETSMK+LTILLY+L+CS GS++QDLW L  PDEKN ITS
Sbjct: 1627 MKKKSCNEGGSYLYNWYFELETSMKKLTILLYLLNCSAGSVVQDLWSLSGPDEKNGITS 1685

[Close]
BLAST of MELO3C029538.2 vs. Swiss-Prot
Match: sp|A4QKX4|YCF2A_CRUWA (Protein Ycf2 A OS=Crucihimalaya wallichii OX=78192 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-20
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Sbjct: 1932 MKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITS 1990

[Close]
BLAST of MELO3C029538.2 vs. Swiss-Prot
Match: sp|A4QKZ7|YCF2B_CRUWA (Protein Ycf2 B OS=Crucihimalaya wallichii OX=78192 GN=ycf2-B PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-20
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Sbjct: 1932 MKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITS 1990

[Close]
BLAST of MELO3C029538.2 vs. Swiss-Prot
Match: sp|A4QJF8|YCF2_AETCO (Protein Ycf2 OS=Aethionema cordifolium OX=434059 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-20
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Sbjct: 1937 MKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITS 1995

[Close]
BLAST of MELO3C029538.2 vs. Swiss-Prot
Match: sp|A4QJP2|YCF2_AETGR (Protein Ycf2 OS=Aethionema grandiflorum OX=72657 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-20
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Sbjct: 1928 MKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVTQDLWSLPGPDEKNRITS 1986

[Close]
BLAST of MELO3C029538.2 vs. TrEMBL
Match: tr|A0A1P8C7T9|A0A1P8C7T9_9ROSI (Protein Ycf2 OS=Cucumis x hytivus OX=442738 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-20
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE GSYLYNWYF+LETSMK+LTILLY+LSCS GS++QDLW LP PDEKN ITS
Sbjct: 1629 MKKKSCNEGGSYLYNWYFKLETSMKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITS 1687

[Close]
BLAST of MELO3C029538.2 vs. TrEMBL
Match: tr|A0A1V0IR37|A0A1V0IR37_9ROSA (Protein Ycf2 OS=Rubus corchorifolius OX=190223 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNEEGSYLY WYFEL TSMK+LTILLY+LSCS GS+ QDLW LP PDEKN ITS
Sbjct: 1921 MKKKSCNEEGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITS 1979

[Close]
BLAST of MELO3C029538.2 vs. TrEMBL
Match: tr|A0A1V0J4B4|A0A1V0J4B4_9ROSA (Protein Ycf2 OS=Rubus fockeanus OX=421242 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNEEGSYLY WYFEL TSMK+LTILLY+LSCS GS+ QDLW LP PDEKN ITS
Sbjct: 1921 MKKKSCNEEGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITS 1979

[Close]
BLAST of MELO3C029538.2 vs. TrEMBL
Match: tr|A0A1V0IRT2|A0A1V0IRT2_RUBNI (Protein Ycf2 OS=Rubus niveus OX=59495 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNEEGSYLY WYFEL TSMK+LTILLY+LSCS GS+ QDLW LP PDEKN ITS
Sbjct: 1921 MKKKSCNEEGSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITS 1979

[Close]
BLAST of MELO3C029538.2 vs. TrEMBL
Match: tr|A0A218KGA5|A0A218KGA5_CUCSA (Protein Ycf2 OS=Cucumis sativus var. hardwickii OX=319220 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-19
Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1    MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS 60
            M KKSCNE GSYLYNWYFELETSMK+LTILLY+L+CS GS++QDLW L  PDEKN ITS
Sbjct: 1627 MKKKSCNEGGSYLYNWYFELETSMKKLTILLYLLNCSAGSVVQDLWSLSGPDEKNGITS 1685

The following BLAST results are available for this feature:
BLAST of MELO3C029538.2 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009346523.16.2e-2081.36ycf2 (chloroplast) [Cucumis x hytivus] >YP_009346537.1 photosystem I assembly pr... [more]
ARC98938.13.1e-1981.36hypothetical protein RF2 (plastid) [Rubus corchorifolius][more]
ARC99172.13.1e-1981.36hypothetical protein RF2 (plastid) [Rubus niveus][more]
ARD03579.13.1e-1981.36hypothetical protein RF2 (plastid) [Rubus fockeanus][more]
YP_009495653.13.1e-1981.36Ycf2 (chloroplast) [Rubus takesimensis] >YP_009495671.1 Ycf2 (chloroplast) [Rubu... [more]
BLAST of MELO3C029538.2 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00860.11.0e-2177.97Chloroplast Ycf2;ATPase, AAA type, core[more]
ATCG01280.11.0e-2177.97Chloroplast Ycf2;ATPase, AAA type, core[more]
BLAST of MELO3C029538.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q2QD30|YCF2_CUCSA1.3e-2179.66Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1[more]
sp|A4QKX4|YCF2A_CRUWA1.9e-2077.97Protein Ycf2 A OS=Crucihimalaya wallichii OX=78192 GN=ycf2-A PE=3 SV=1[more]
sp|A4QKZ7|YCF2B_CRUWA1.9e-2077.97Protein Ycf2 B OS=Crucihimalaya wallichii OX=78192 GN=ycf2-B PE=3 SV=1[more]
sp|A4QJF8|YCF2_AETCO1.9e-2077.97Protein Ycf2 OS=Aethionema cordifolium OX=434059 GN=ycf2-A PE=3 SV=1[more]
sp|A4QJP2|YCF2_AETGR1.9e-2077.97Protein Ycf2 OS=Aethionema grandiflorum OX=72657 GN=ycf2-A PE=3 SV=1[more]
BLAST of MELO3C029538.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1P8C7T9|A0A1P8C7T9_9ROSI4.1e-2081.36Protein Ycf2 OS=Cucumis x hytivus OX=442738 GN=ycf2 PE=3 SV=1[more]
tr|A0A1V0IR37|A0A1V0IR37_9ROSA2.0e-1981.36Protein Ycf2 OS=Rubus corchorifolius OX=190223 GN=ycf2 PE=3 SV=1[more]
tr|A0A1V0J4B4|A0A1V0J4B4_9ROSA2.0e-1981.36Protein Ycf2 OS=Rubus fockeanus OX=421242 GN=ycf2 PE=3 SV=1[more]
tr|A0A1V0IRT2|A0A1V0IRT2_RUBNI2.0e-1981.36Protein Ycf2 OS=Rubus niveus OX=59495 GN=ycf2 PE=3 SV=1[more]
tr|A0A218KGA5|A0A218KGA5_CUCSA2.6e-1979.66Protein Ycf2 OS=Cucumis sativus var. hardwickii OX=319220 GN=ycf2 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
Vocabulary: INTERPRO
TermDefinition
IPR008543Uncharacterised_Ycf2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009536 plastid
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029538.2.1MELO3C029538.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008543Uncharacterised protein family Ycf2PANTHERPTHR33078FAMILY NOT NAMEDcoord: 1..59

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029538.2Cucurbita moschata (Rifu)cmomedB117
MELO3C029538.2Cucumber (Gy14) v2cgybmedB044
MELO3C029538.2Cucumber (Gy14) v1cgymedB159
MELO3C029538.2Cucurbita maxima (Rimu)cmamedB070
MELO3C029538.2Cucurbita maxima (Rimu)cmamedB128
MELO3C029538.2Cucurbita moschata (Rifu)cmomedB062
MELO3C029538.2Cucurbita pepo (Zucchini)cpemedB388
MELO3C029538.2Cucurbita pepo (Zucchini)cpemedB727
MELO3C029538.2Wild cucumber (PI 183967)cpimedB050
MELO3C029538.2Cucumber (Chinese Long) v2cumedB047
MELO3C029538.2Bottle gourd (USVL1VR-Ls)lsimedB419
MELO3C029538.2Watermelon (Charleston Gray)medwcgB246
MELO3C029538.2Watermelon (97103) v1medwmB283
MELO3C029538.2Silver-seed gourdcarmedB0606
MELO3C029538.2Silver-seed gourdcarmedB0797
MELO3C029538.2Cucumber (Chinese Long) v3cucmedB051
MELO3C029538.2Watermelon (97103) v2medwmbB247
MELO3C029538.2Wax gourdmedwgoB304