MELO3C029494.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C029494.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptiontransposon Tf2-1 polyprotein isoform X1
Locationchr02 : 20777680 .. 20783192 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACAGAAAGGGATAAATTAGTAACTATTCTACAGGAACAGACAACAAATTGGTGAAAATTAGAAGTGAAGCATGAATGCTACTATGATTTTGTTAGACCACCCATCATACACACTTATGCTAGGAGGGGTAGTCTGGGAAATTCACATACCTAGAGTAAATGGAGTCGGGTGACGTATTTGGTGTTATATAAATATAGTTATATACTACTTTTGTATGTTCTGGGACATAGATTATGTTTTGATATTAAACTTGCTGGAGAGTGACTCCTCGAAAGGCCAATGTATGTTGTTCTCAGTAAATCAAGGTGCTAAACTCTCAGTAGAGTGCTGTTACATTGATATCAGAGCGTTCATCCTGGTTAAATTTGAGAAGATGCAGCCGAAGAAACATGAGGAGAAAGGAAAGGATTCCGACCAGATGTGACTGATGTTCAGAAGGGATCGGATGTGTCCATGAAGGAACTGGCAGAGAAGGTTAATTTGATGATGCAGCAAATGGATGAGCAATCGGTTGAGAATTAGAAAAGCATAGAGTTGATGTTCCATAACTTTGAGGACCAGAGGAGTGCAAGGAAACTCGCAGGGCAATCGCAGGGCAATCTCTGCCTTATCTCGGGGAGCCTCAATTCAAAGTATGGAGGAAATAATTACCCACCCAAAACTGAAGTACCCAGAAGGATTTGGGGAGTCTCTAGTGGAGAACATGAATGACGAAGGAGGACAACGTGTGAAAACAGAGGAAGGGTATGCCAATTGGAGTAGGTTTAGGTGGGTAGAGATGCCGATGTTTGACAGCTGTCAACCTGACTCTTGGATATTCAGGGCAGAAAGGTATTTTCATATTTATCAGCTTTCAAATTCGGAAAAGATTATGGTGGCTTCCATCAGTTTTACAGGCGCAGCCTTACATTGGTATCAATGGGCGGATAACCACCAAACGTTTGAATATTGGAAGGATCTGAAGCTCCGGCTACTTTACTGATTTCGACCAACACAGGAAGGTTCCCTATGCGCACGTTTCTTAGCCGTCAAGCAAGAAACAGTCACCGACTTCCATTAGCGTTTTGAGGCTCTATCCGCCCTGTTACCTCACCTCTCTGACAAAGTACTTGAAAGCACTTTCCTGAACGGGTTAGATGCAGAGATCAGGGCTGAAGTTGTTTGCTTTGAGCTGGTTGGATCGGGCCAGATCATGCAAGCAGCCCAGAGAGTTGAAGATAAAAAGGCAGCGCAGAAAAATAGAATGGGCCCATACAAATACACTAAAGCCTTTCAGCCCATCCAATTAGGCCTAGAAAATCCAGGTGTCATGCCAGCCAAGGCCATTGAGGCAGTGCCCATCCGTTCCATCACCCTGCCAAACGCAATTCAGTCAGTGTGAAAAGACACTCCAATTAAACCTTTGTCGAACTCCGAACTACAAGCACGAAAACCGAAAGGTCTATGTTACCGTTGCAACGAGATGTACATCGTGGGACACCCTTGCAAAGGTAAAGAGATGCTGCTACTCATGGTGGACAACGAGATGCTAGAAGAGATTGATGACATGACCATGGATACTGTTCCATCAAAGGAGGAAACAACAGAAGTTGCAAAACTATCTCTTAATACTGTGGTGGGTACCCTAACCCCGACACCCTGAAGGTTGAAAGAAAAATCGAAATGGAAGAAGTGAAGTTGTGGGTAGCTTCGCAGTCCACAAGAACCACAACTTCATAGCTCCTCGGATAGTAGAAAATTTGAAATTACCACTAACCGATACCACCAAATACGAGGTAATCATGGGAACGAGTTTGACAGTGCGCAGAAAAGGGATATATAAAAATGTGGTGGTCTCGCTAGAGACATCACTATTGAGGAAGACTTCTTACCATTAGAACTTAGAGGGGTCGATCTGATCCTTGGAATGCAATGGCTAAGAACATTGGGTGTGACGGAGGTTGGTTCAAAAAATCTAACCCTGTCCATTGAGGTGGGCGGAAAGCGGATAATCATCAAAGGAGACCCTATTCTCTTGAGGAAAGAAATAATGCTTAAAAAGATGCAAAGGACTTGGGATAAAACCGATCGGGTCTATTTTGTGGTGTTGCGTGCAATCATGGCGGAGATGCAAACAGAAGAGGGTAAAAGGGAAACCACTAGCTTTACTATGTGGGGTAGCCGATACAAGGATTAATTGAGCATTTCAGGGAAAACTTTTGAATCGTCTGACCGATTACGCCACACAGAGAAGCTGACCACCAAATCGTTCTCAAGGATGATCGGGAAATAGTGGACCAACGACTCTATCACCATTCATCATATCAGAAAGAAGAAATTAAGAGGCTAGTAACAGAAATGCTTCACGCAGGGATCATAAGGCCTAGCCATGGACCCTATGCTAGTCCGGTCCTTATGTTTAAGAAGAAAGACTGGAGTTGGCGATTCTGTGTTACAAAGGATTGAATGAGTTAACTGTGTCAAATAAGTACCCCATTCCAGTCATCAAAGAACTGTTGGATGAGCAGTTTGGGCCAAAGATCTTCACCAAGCTAGATCTTTGTTCAAGCTAGCACCAAATACGTTTTCACGAAGTAGATATTCCAAAAATGGTGTTTCGTACTTATGATGGGCACTACAAGTTTCTAGTCATGTCGTTTGGACTCAAGAATGCTCCAGCTACCTTCCAATTGCTAATGAACGAGGTTTTTATATATTTCCTAATGAAACTTTTCCTAATCTTTGTTGATGACATCCTTATCTACAGCACAGATTTAAAATCTCATCTCAATCTCTTGACCCTAGTTTCTAAACTTTTGCGAAGCAATTCACTATATGCAAATTTCAAGAAGTGTCGTTTTGCTCATAGTCGTCTAGAATACTTAGGCCATTGGGTGTTGGCAAAAGGAGTTGAACCCAATCTAGAAAAGGTACGGGCAATATTGGAATGGCACCAACCCACCAAAGTTCAAGAATTACAAAGTTTCCTTGAGCTGACTAGCTCGGTTTATAGTAGGTTATGGACAGATAGCACAACGATTACATCGAATGATGGGAACGGATGCTTTTGTTTGGTCGGAGGAGTCTGTCGAAGCATTCGTGCAATTGAAGTGGGTCATGGTAACATTACTTGAATTAGCTTTGCCTGATTTTTCCATCACTTTCATTGTTGAGACTGATGCATGGGGTAGTAGTGGTTTTAACTCGAGGGCAGAGGCCCATTGCCTTTTTCAGCAAGGTTCTCTCTCTGCACACACAAGCGAAATCTGCTTATGAGAGGGAGCTTATTGCTATTGTAATAGTTGTCCAACATTGGCGTTCTTATCTATTGGGACGACGATTTATGGTAAGAACCGACCAGCAATCTTTAAAACATATCGTTGAGCGAACAGTGATCCAACTGGAGTATCATATTTGGGTATCCAAGCTTCTCGACTATGATTTTGAAGTGCAACGCAAACCTGACGCTTAGAATAATGTTGCCAATGCCTTATCATGCATGCGACCACATGTGTATTTAGCAAATTTGACAGCACTAGCCATTCTCAATGTGGATGTCATCTGTGATGAGGTTACATCCAACGTCTATCTCCGGCAAATAAGGAAAGATTTGGAGGTCATTTCGGATCGTGACCCAGGCTTCTCAATGGTTCAAGGCAATTTTCTATACAAAGACAAACTAGTCCTATCTGCCCATTCCTCCCTGATTCCCACAATCCTTCACACGTATTTTAGAGGTCATTCTGGTTATCTGAGAACGTACAAGAGGATATCTAGCAAATTGTACTGGCGGGTATGAAAACTCTGATTAAGCAATATGTATCAGGATGTGATACGTGCCAAAGGAACAAAGCTAGCACTTAAGCAACCGTCGTCCTGCTACAACCCCTGCCTGTTCCAGATCGGATTTTGGAGGATTTCTCCATGGATTTTATCGAGAAACTGCCACGTTCACAAGGGTGTGACAGCATCTTGGTGATATTTGACCGACTGAGTAAGTATGCCAGGTTCTTACCCTGGAGTCACCCTCATATAGCAAAAACAGTGGCCTAGTTGTTCGCTAAGGAAGTTGTACATGACTTCGGGTTTCCCAAATCTATTGGCCCATACCGAAAGTATTTATCAGTAAATTTTGGGGTGAAATGTTTCACTAACAGGGAACTCAGCTACGGAGAAGCACGACTTATCACCCACAGATGGATGGATATACAGAAATCGTGAATAAGAGTGTGGAGACGTATTTGCGTTGCTTATGTGGTGAAAAACCAAAGAAATGGATGGAATGGGTGGATTGGGTCGAGCACTAGTATAACACTTCCTATCATGCCATTTTAAAATCCACTTCCTACCAAGTTGTGTTTGGCCAACCACACCAGCCCTCACTTTTTATGGAAGCCAAAAAACTTCCAATGCCACCCTTGATGAACAATTGCTAGAACAAGACAAGGTGCCACATGAGCTAAAGTATCACCTAGAGAGGGCTTAAGAACGAATGAAACAATACGCTGACCGCCACCGCCGTGAAGAGTATATCGTGGATGATTGGGTGTATTTAAAATTAAAACCTTACCGACTGCATACAGTGGCGCGGCAGTATAGCGAGAAATTATCCCCTAAATATTTTGGACCCTACCAGATTGAAGAAAAGATCGGGTCCGTAGCTTATCGTCTCGCATTACCATCAACAGCAGCTATCCATTCTGTATTTCATGTCTCTCAACTAAAACAAGCTCTCAGTAGCACAACTCTTATTGAATCTTTGCCCCCTTCCTTTACCGATGACTTTGAATGGGAAGCCATACTGGAAGTGATAACTTGTAGAAATACAATTTATTATGGCCTTTTAAGTAGAATAATGAAGCCTTAACGTGAGAAAAAAGGAAGAAAACGCGTAGCAAAATAGACAAAATAGGATAATTACGCGTTACAAGCATCAAAAGAGTAAAACACTTGTTTATCACGATTTTCTTTTCATGTCTTAATGCAGGTTTTTAAGCGAAAGAAAGAGTAGTAGCGACGCGAAAAGCTTCAGGCGAATAGAGCATACGTCAACTAGGCGACAAGAGGAAGGATGCTAGGCGATCTACATTGCTAGAAGACAAAAATGGATGGCGTGGATGTCAGAAAAGGACGAAAAGACGTCTACGGCAACATGCAGCAATGTCATAGAATTAATGACATCCATACTATGTTAAGTCCCATCGGCCCTCGCCTATAAATACAAGGCTATCTCCTCCAAACAAATTGCGTGAAATTTGTGGAGAACAAGCCTAACTTTATCTCTTACCTTTCTTCTCCACTTTAGCTGAGAACTTAGAGGAGAGTCGAGAGAAGTCCAAACCCCATTTTCCCCCTCAGTTGTAATCGGCAAAAATAGAGCCAATGAGCATAAGAAATTGTGTTCAGAGGCTCGACTCATTTCTTGTAACTTTCATCTGTATTTTCTATTTATTTGTGTTTGTAATCTGAACCTCATGGCCAAAAGGTATAAAGTTTTCTGTATGAATGCAAAACATTACTATTTCCACGCA

mRNA sequence

AGAACAGAAAGGGATAAATTAGTAACTATTCTACAGGAACAGACAACAAATTGGTGAAAATTAGAAGTGAAGCATGAATGCTACTATGATTTTGTTAGACCACCCATCATACACACTTATGCTAGGAGGGGTAGTCTGGGAAATTCACATACCTAGAGTAAATGGAGTCGGGTGACGTATTTGGTGTTATATAAATATAGTTATATACTACTTTTGTATGTTCTGGGACATAGATTATGTTTTGATATTAAACTTGCTGGAGAGTGACTCCTCGAAAGGCCAATGTATGTTGTTCTCAGTAAATCAAGGTGCTAAACTCTCAGTAGAGTGCTGTTACATTGATATCAGAGCGTTCATCCTGGTTAAATTTGAGAAGATGCAGCCGAAGAAACATGAGGAGAAAGGAAAGGATTCCGACCAGATGTGACTGATGTTCAGAAGGGATCGGATGTGTCCATGAAGGAACTGGCAGAGAAGGTTAATTTGATGATGCAGCAAATGGATGAGCAATCGGTTGAGAATTAGAAAAGCATAGAGTTGATGTTCCATAACTTTGAGGACCAGAGGAGTGCAAGGAAACTCGCAGGGCAATCGCAGGGCAATCTCTGCCTTATCTCGGGGAGCCTCAATTCAAAGTATGGAGGAAATAATTACCCACCCAAAACTGAAGTACCCAGAAGGATTTGGGGAGTCTCTAGTGGAGAACATGAATGACGAAGGAGGACAACGTGTGAAAACAGAGGAAGGGTATGCCAATTGGAGTAGGTTTAGGTGGGTAGAGATGCCGATGTTTGACAGCTGTCAACCTGACTCTTGGATATTCAGGGCAGAAAGGTTTTTAAGCGAAAGAAAGAGTAGTAGCGACGCGAAAAGCTTCAGGCGAATAGAGCATACGTCAACTAGGCGACAAGAGGAAGGATGCTAGGCGATCTACATTGCTAGAAGACAAAAATGGATGGCGTGGATGTCAGAAAAGGACGAAAAGACGTCTACGGCAACATGCAGCAATGTCATAGAATTAATGACATCCATACTATGTTAAGTCCCATCGGCCCTCGCCTATAAATACAAGGCTATCTCCTCCAAACAAATTGCGTGAAATTTGTGGAGAACAAGCCTAACTTTATCTCTTACCTTTCTTCTCCACTTTAGCTGAGAACTTAGAGGAGAGTCGAGAGAAGTCCAAACCCCATTTTCCCCCTCAGTTGTAATCGGCAAAAATAGAGCCAATGAGCATAAGAAATTGTGTTCAGAGGCTCGACTCATTTCTTGTAACTTTCATCTGTATTTTCTATTTATTTGTGTTTGTAATCTGAACCTCATGGCCAAAAGGTATAAAGTTTTCTGTATGAATGCAAAACATTACTATTTCCACGCA

Coding sequence (CDS)

ATGGAGGAAATAATTACCCACCCAAAACTGAAGTACCCAGAAGGATTTGGGGAGTCTCTAGTGGAGAACATGAATGACGAAGGAGGACAACGTGTGAAAACAGAGGAAGGGTATGCCAATTGGAGTAGGTTTAGGTGGGTAGAGATGCCGATGTTTGACAGCTGTCAACCTGACTCTTGGATATTCAGGGCAGAAAGGTTTTTAAGCGAAAGAAAGAGTAGTAGCGACGCGAAAAGCTTCAGGCGAATAGAGCATACGTCAACTAGGCGACAAGAGGAAGGATGCTAG

Protein sequence

MEEIITHPKLKYPEGFGESLVENMNDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERFLSERKSSSDAKSFRRIEHTSTRRQEEGC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029494.2.1MELO3C029494.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..95