MELO3C029434.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029434.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 13831880 .. 13832221 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGATACTGGTGAACGTATGAGAGATAATAAGCGAACACATCATAGCATGGGTCAAGCATTCCCGCAAAGCAAGACCTTTCCAGCACTTGATTGAGAAATTGTGCTTAAAGGCATGCCCGATGTTAGACAAACTTCCTCAGATAGAGTTGAAGGATGGGGTTTGGTCCTCTACAACCCTTCACCGTATAATTGCCATCCACAAGAATAAGGCTAAGCTAAAATGCCTCAAAACTAAATAAGATGGTGAGTCAGAGGTTCAAGAAGTGGATGATAAAGATGAAGAAGAGAGAGGAAAATGATGTCCCTCTAAAACGTAAACAACAAGACGAGAGTGA

mRNA sequence

ATGGAGGAGATACTGGTGAACGTATGAGAGATAATAAGCGAACACATCATAGCATGGGTCAAGCATTCCCGCAAAGCAAGACCTTTCCAGCACTTGATTGAGAAATTGTGCTTAAAGGCATGCCCGATGTTAGACAAACTTCCTCAGATAGAGTTGAAGGATGGGGTTTGGTCCTCTACAACCCTTCACCGTATAATTGCCATCCACAAGAATAAGGCTAAGCTAAAATGCCTCAAAACTAAATAAGATGGTGAGTCAGAGGTTCAAGAAGTGGATGATAAAGATGAAGAAGAGAGAGGAAAATGATGTCCCTCTAAAACGTAAACAACAAGACGAGAGTGA

Coding sequence (CDS)

ATGTTAGACAAACTTCCTCAGATAGAGTTGAAGGATGGGGTTTGGTCCTCTACAACCCTTCACCGTATAATTGCCATCCACAAGAATAAGGCTAAGCTAAAATGCCTCAAAACTAAATAA

Protein sequence

MLDKLPQIELKDGVWSSTTLHRIIAIHKNKAKLKCLKTK
Homology
[Close]
BLAST of MELO3C029434.2 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_3G263250 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-10
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 1   MLDKLPQIELKDGVWSSTTLHRIIAIHKNKAKLKCLKTK 40
           ML+KLPQ+E+KDG+W  +TLHRIIAIHKNKAK+KCLKTK
Sbjct: 100 MLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK 138

[Close]
BLAST of MELO3C029434.2 vs. TrEMBL
Match: tr|A0A0A0LAN0|A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-10
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 1   MLDKLPQIELKDGVWSSTTLHRIIAIHKNKAKLKCLKTK 40
           ML+KLPQ+E+KDG+W  +TLHRIIAIHKNKAK+KCLKTK
Sbjct: 100 MLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK 138

The following BLAST results are available for this feature:
BLAST of MELO3C029434.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57727.15.0e-1079.49hypothetical protein Csa_3G263250 [Cucumis sativus][more]
BLAST of MELO3C029434.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C029434.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029434.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAN0|A0A0A0LAN0_CUCSA3.3e-1079.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029434.2.1MELO3C029434.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029434.2Cucumber (Gy14) v2cgybmedB034
MELO3C029434.2Cucumber (Gy14) v2cgybmedB050
MELO3C029434.2Cucumber (Gy14) v1cgymedB645
MELO3C029434.2Cucumber (Gy14) v1cgymedB646
MELO3C029434.2Cucurbita maxima (Rimu)cmamedB064
MELO3C029434.2Cucurbita maxima (Rimu)cmamedB114
MELO3C029434.2Cucurbita moschata (Rifu)cmomedB057
MELO3C029434.2Cucurbita moschata (Rifu)cmomedB107
MELO3C029434.2Cucurbita pepo (Zucchini)cpemedB397
MELO3C029434.2Wild cucumber (PI 183967)cpimedB038
MELO3C029434.2Wild cucumber (PI 183967)cpimedB056
MELO3C029434.2Cucumber (Chinese Long) v2cumedB035
MELO3C029434.2Cucumber (Chinese Long) v2cumedB055
MELO3C029434.2Bottle gourd (USVL1VR-Ls)lsimedB432
MELO3C029434.2Bottle gourd (USVL1VR-Ls)lsimedB420
MELO3C029434.2Watermelon (Charleston Gray)medwcgB230
MELO3C029434.2Watermelon (Charleston Gray)medwcgB239
MELO3C029434.2Watermelon (97103) v1medwmB254
MELO3C029434.2Silver-seed gourdcarmedB0906
MELO3C029434.2Cucumber (Chinese Long) v3cucmedB041
MELO3C029434.2Cucumber (Chinese Long) v3cucmedB058
MELO3C029434.2Watermelon (97103) v2medwmbB229
MELO3C029434.2Watermelon (97103) v2medwmbB238
MELO3C029434.2Wax gourdmedwgoB302
MELO3C029434.2Wax gourdmedwgoB310