MELO3C029298.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029298.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 2616732 .. 2619655 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCAAAGGTTAATTGTCTGTTAAGAAATATATTTGATGGACAATGCTTGCTGACTTCAAATTCCAAGGTTGGACCCGATTGCTTAAGGTGTTCAGCCAATAACAGATTGAACTCTTTTTGAAGTATATTTAGTTCTTCAGGTGTAAGATCTTTAAGATGTTGTTGCAGGGAAGATGATGGATTCTCTTGTGACCTTTTCGGCCGTGCTTCATTCAGATTCTCGTCTCCAAACGTTCCAATTGCCAGCAATACATGAGACCAGTTGCTGAATTCTTTTGGGTGAGTTTTGTGCACTATCTCATCTGTTTGATAAAGAATTTTTAAGTTACTTGCACTCAAATCATCTAAAAGATCATCATACCATTTGAAAAGAAACTGAATAGTAGAGTCTTTGCTCACCGTTGATTGAATTTGATGTTCTTTTGCTCCCCTTTCTGCCACTAGGCTTCTTCCCTTGCATCCAATTCAATATCTGCACCCAAAAACGAGTTGTAATCAATCATGAAGATTACAAGACAAAATCTAGATAGAACACTCTTGCATTAGCTTACCCTCATTTGTGAAAAGATGGATTCGCAACAGGGATGTACCCTGTTCTTCGTCCTCTTTGTGGCCTCTAGTTAGAGTTTGAATTCTTGTTGATAAGGCCAGATAGAACCAGGTCTTGAAAGATATACCTTTAATTTTGGGCTATGGATCCCACAGCAGGCACAGGGATTGCATACACCAAGGCAAGATGAGTGCAAAACACTTTATATAGTGAAGAGAAATGTGAGAAATTCCACAACCAAACTACTAGTTGCCACTGTTTCAAGTTCCAAAACGCTGACTCTCTTTTTCTCTCTCTCTTGGGTTTGTCACATCTTTGCCTCCCTTATTACAATGTCGTTTTCCTTCATAGAAATATTCAACCTCTCTTCTTTTCCATCAACTTTGATCAAAATGAAAAAGAACATTTAGCTACTTCTCCCTGTCTCTACATCACCTCATCATTTTAAGAACCCATATAGCTTTGCCCAACACATCAACAGTACATCACATGTGAAAAATAACACTGTTATTCCAATATCTCTACATAGGCAGATTATATAAACTACTACAACACACAGCTCGAGAAATCGCACAACCAACCGAATATAACATGGTTTAATGGGAAATCAAATAGCCGGTTATCTTGTTTAGAACGTTTTTCATTGGAGATAAAGGATTTTCACTATGCATCCATTATTATTGTTGATGTGTTTCTTATGATAGAGATCATCCAAGCGATGCAGAAAATCCGGGTGGCTGCTCTGTTGATGGAAGTGCATGGAAGAAGATGGACAAGGAAGAAAAGGACATGAAAGACTGAGCTATCACGCACGAAGAAGATTTGAGGAAGAACATCTCTTTTTTATCAGAAATATAAAATAATATATATGGATGGCCAATGGAAAGAGGTAATATCTCATACGTTATATATAATGTATATATATTTTCTATAGCCCACTTTCTCGTGGGGATGTCTCTTACTAACCGAACCACTAGGGTGCACATCCTAAATCTCACTAACATTGGTTTTAGCACCGAATATAATTTTAATTTTTTTTTAGTTAAATTGTAAATTTGGTCCTTTGATTTGGAGAAAGAAGTCCACGTGTTTTATTATTAGTATTTATGCTCTATGGATTATGGTTTGATAAATACTCGTAAATAATCCCTAATTTTAATTTCTTTTGGGGTTTGCAATTTTGTTCCTCTAGTTTGGCTAAGTTAGAATTTAGCTCAACGTGGTGGTTTATAATTAAAATTTAGTTCCCTTGGAGTGTTTATCAAACCATACAGACTATTTAGGAAATTTTATTAAACCAAAGAGATTAAATCCTAATTTTTAAAACCACAGGGACTAGACTCTATGCGGACATTTGGGGTAAGGGGGTGAGTTATTATAATTCTAGATTATTGTAGTTAGGTTATAATAATTTGTGTTTGGGGTGTAGATTATTTTAGTTAGGGTTGTAAACATCGAATGTCAAATAGTAAATACTATAACAACTAGTCAATATTATAGCAAATGGAAAAATTCAAAATAGTGTTTACCGTAACCAATTGAAGAATTTTAACTAGTCCTTATTGTACCAAGAGATAGTTATTATAATCTTAGATAATCTTTGCCTCAAACAGCTTCTAAGAGAACGTTCAAACCCTTATCATGTCTTGTATGGGTAGAGCTATTATGACCCATCCAATTTTTGAATCTCCTATTATAATAGCTGAAGTTACCAATTATTATAACTCACCCTTAACAAATAGAAAACTATATATTTAAAACTCAAGAATTCAATATTTGAAAACCCTTATTATTTACCGTGTTTACCATTTTGTAGTCGAACATCTCCCATGCAAGCACTCAAACACATAGACTATTATAATTTATAACCCACGGACTATAATACTCGACCAAACAACTAGCAAACCTTTTTAAAGACATAGTAACCAAACTTATAATTCAATAATTTTCTTTAACCCACACTTGAATTTGAACCATTTTCGTGTCTACTTCCTTCCTAATTTATTTATTTATTTTCCAGAATCCTCCAAAAGCAGTAGCCTGGATTTGTTTTGGACACGTGAAGCTGTCCATAATTCATATGGCGGGCGGTGGAAGCTTTAAACAAAACTGCATATATCGGACCATAATCGAATCAGGCTTTGCTTGTTTACATGAAGGAGCAGGTGAGTAATTAATTGTATATATACAAAATAATACCCCTTCTTGTGAATGATGACCCTACACTTTGATGTCATTCCTCCCTTCAAACAGTATCCGAAGAATTGTCTTGAGTGCGTTTGGGCACAAGTTGAGTTGAATGAAGTGATCTATTATACACCATTCAGTGTTTGAACTTCTTGTTATTATAGATGATCAAGTTGGTTACAATCA

mRNA sequence

ATCCAAAGGTTAATTGTCTGTTAAGAAATATATTTGATGGACAATGCTTGCTGACTTCAAATTCCAAGGGAAGATGATGGATTCTCTTGTGACCTTTTCGGCCGTGCTTCATTCAGATTCTCGTCTCCAAACGTTCCAATTGCCAGCAATACATGAGACCAGTTGCTGAATTCTTTTGGAGATCATCCAAGCGATGCAGAAAATCCGGGTGGCTGCTCTGTTGATGGAAGTGCATGGAAGAAGATGGACAAGGAAGAAAAGGACATGAAAGACTGAGCTATCACGCACGAAGAAGATTTGAGGAAGAACATCTCTTTTTTATCAGAAATATAAAATAATATATATGGATGGCCAATGGAAAGAGAATCCTCCAAAAGCAGTAGCCTGGATTTGTTTTGGACACGTGAAGCTGTCCATAATTCATATGGCGGGCGGTGGAAGCTTTAAACAAAACTGCATATATCGGACCATAATCGAATCAGGCTTTGCTTGTTTACATGAAGGAGCAGGTGAGTAATTAATTGTATATATACAAAATAATACCCCTTCTTGTGAATGATGACCCTACACTTTGATGTCATTCCTCCCTTCAAACAGTATCCGAAGAATTGTCTTGAGTGCGTTTGGGCACAAGTTGAGTTGAATGAAGTGATCTATTATACACCATTCAGTGTTTGAACTTCTTGTTATTATAGATGATCAAGTTGGTTACAATCA

Coding sequence (CDS)

ATGGATGGCCAATGGAAAGAGAATCCTCCAAAAGCAGTAGCCTGGATTTGTTTTGGACACGTGAAGCTGTCCATAATTCATATGGCGGGCGGTGGAAGCTTTAAACAAAACTGCATATATCGGACCATAATCGAATCAGGCTTTGCTTGTTTACATGAAGGAGCAGGTGAGTAA

Protein sequence

MDGQWKENPPKAVAWICFGHVKLSIIHMAGGGSFKQNCIYRTIIESGFACLHEGAGE
Homology
[Close]
BLAST of MELO3C029298.2 vs. NCBI nr
Match: KGN66314.1 (hypothetical protein Csa_1G597120 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 3.5e-20
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0 

Query: 1  MDGQWKENPPKAVAWICFGHVKLSIIHMAGGGSFKQNCIYRTIIESGFACLHEGAGE 58
          MDGQWKENPPKAVAWIC+GHVK+SIIH  GGGSFKQ  I RT IESGFACLH+GAGE
Sbjct: 1  MDGQWKENPPKAVAWICYGHVKVSIIHKVGGGSFKQVHIGRT-IESGFACLHKGAGE 56

[Close]
BLAST of MELO3C029298.2 vs. TrEMBL
Match: tr|A0A0A0LZ34|A0A0A0LZ34_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597120 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-20
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0 

Query: 1  MDGQWKENPPKAVAWICFGHVKLSIIHMAGGGSFKQNCIYRTIIESGFACLHEGAGE 58
          MDGQWKENPPKAVAWIC+GHVK+SIIH  GGGSFKQ  I RT IESGFACLH+GAGE
Sbjct: 1  MDGQWKENPPKAVAWICYGHVKVSIIHKVGGGSFKQVHIGRT-IESGFACLHKGAGE 56

The following BLAST results are available for this feature:
BLAST of MELO3C029298.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66314.13.5e-2084.21hypothetical protein Csa_1G597120 [Cucumis sativus][more]
BLAST of MELO3C029298.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C029298.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029298.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LZ34|A0A0A0LZ34_CUCSA2.3e-2084.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597120 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029298.2.1MELO3C029298.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C029298.2Csa1G597120Cucumber (Chinese Long) v2cumedB033
MELO3C029298.2CsaV3_1G041190Cucumber (Chinese Long) v3cucmedB039
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029298.2Cucumber (Gy14) v2cgybmedB032
MELO3C029298.2Cucumber (Gy14) v2cgybmedB479
MELO3C029298.2Cucumber (Gy14) v1cgymedB235
MELO3C029298.2Cucumber (Gy14) v1cgymedB581
MELO3C029298.2Cucurbita maxima (Rimu)cmamedB061
MELO3C029298.2Cucurbita maxima (Rimu)cmamedB111
MELO3C029298.2Cucurbita maxima (Rimu)cmamedB383
MELO3C029298.2Cucurbita maxima (Rimu)cmamedB937
MELO3C029298.2Cucurbita moschata (Rifu)cmomedB053
MELO3C029298.2Cucurbita moschata (Rifu)cmomedB104
MELO3C029298.2Cucurbita moschata (Rifu)cmomedB370
MELO3C029298.2Cucurbita moschata (Rifu)cmomedB926
MELO3C029298.2Cucurbita pepo (Zucchini)cpemedB156
MELO3C029298.2Cucurbita pepo (Zucchini)cpemedB353
MELO3C029298.2Cucurbita pepo (Zucchini)cpemedB393
MELO3C029298.2Cucurbita pepo (Zucchini)cpemedB733
MELO3C029298.2Wild cucumber (PI 183967)cpimedB036
MELO3C029298.2Wild cucumber (PI 183967)cpimedB538
MELO3C029298.2Cucumber (Chinese Long) v2cumedB524
MELO3C029298.2Melon (DHL92) v3.6.1medmedB078
MELO3C029298.2Bottle gourd (USVL1VR-Ls)lsimedB310
MELO3C029298.2Bottle gourd (USVL1VR-Ls)lsimedB418
MELO3C029298.2Watermelon (Charleston Gray)medwcgB237
MELO3C029298.2Watermelon (Charleston Gray)medwcgB217
MELO3C029298.2Watermelon (97103) v1medwmB250
MELO3C029298.2Watermelon (97103) v1medwmB262
MELO3C029298.2Silver-seed gourdcarmedB0098
MELO3C029298.2Silver-seed gourdcarmedB0611
MELO3C029298.2Silver-seed gourdcarmedB0656
MELO3C029298.2Cucumber (Chinese Long) v3cucmedB552
MELO3C029298.2Watermelon (97103) v2medwmbB235
MELO3C029298.2Watermelon (97103) v2medwmbB257
MELO3C029298.2Wax gourdmedwgoB288
MELO3C029298.2Wax gourdmedwgoB303