MELO3C029234.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029234.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionZinc finger protein ZPR1-like protein
Locationchr01 : 32247453 .. 32248050 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCCTTATAATCATAGAAACGGGTCAAAGTCGTTTCTACAACGATAGTACAAGCTCTCTAAGCAAAGAGGGAAGCTGATTGATCGTGTGGAGTTGTTCTGTCAAACACACGTTCGAGATGGGACGTTCATGTCCCAGGCTGCGGAGGCTGCGCATGTAAGTTATCCAACCAACACTTCTACTTTCATTTGCCCTCTTTCATATATAATATATTTTTTACTTACTAAGATAGTTTGTAAATTTGTTGTAGAATCAAATGCTAGAACTCTAGTCCCAGACTACCCTAGAGGGTAATCGGTCACTCTCTAGAGATGAGATATGCGAGACTGTGTTGGATAGGCGACCAGACTACTCAAAAGGCCTTGGTTCGGGACCCAAGCCGAAGGTTCGCAAGACTATGAGTGCGAGCAGTTCCACGACGTCATGTCTGCAATCCACAGTAGAGCTTCAATTACAGGCTAAACTTGATCAAACTATGCAACAAATTGGAGAGAACACAAGAAATCACGAAGCATTAGTTTCAGAAGTAGAACGAATGTGGAAGCTGATAGAAGACATGACTCAACAACAACAAGGACCACCATATGATGATCCCTAG

mRNA sequence

CAGCCTTATAATCATAGAAACGGGTCAAAGTCGTTTCTACAACGATAGTACAAGCTCTCTAAGCAAAGAGGGAAGCTGATTGATCGTGTGGAGTTGTTCTGTCAAACACACGTTCGAGATGGGACGTTCATGTCCCAGGCTGCGGAGGCTGCGCATACTACCCTAGAGGGTAATCGGTCACTCTCTAGAGATGAGATATGCGAGACTGTGTTGGATAGGCGACCAGACTACTCAAAAGGCCTTGGTTCGGGACCCAAGCCGAAGGTTCGCAAGACTATGAGTGCGAGCAGTTCCACGACGTCATGTCTGCAATCCACAGTAGAGCTTCAATTACAGGCTAAACTTGATCAAACTATGCAACAAATTGGAGAGAACACAAGAAATCACGAAGCATTAGTTTCAGAAGTAGAACGAATGTGGAAGCTGATAGAAGACATGACTCAACAACAACAAGGACCACCATATGATGATCCCTAG

Coding sequence (CDS)

ATGTCCCAGGCTGCGGAGGCTGCGCATACTACCCTAGAGGGTAATCGGTCACTCTCTAGAGATGAGATATGCGAGACTGTGTTGGATAGGCGACCAGACTACTCAAAAGGCCTTGGTTCGGGACCCAAGCCGAAGGTTCGCAAGACTATGAGTGCGAGCAGTTCCACGACGTCATGTCTGCAATCCACAGTAGAGCTTCAATTACAGGCTAAACTTGATCAAACTATGCAACAAATTGGAGAGAACACAAGAAATCACGAAGCATTAGTTTCAGAAGTAGAACGAATGTGGAAGCTGATAGAAGACATGACTCAACAACAACAAGGACCACCATATGATGATCCCTAG

Protein sequence

MSQAAEAAHTTLEGNRSLSRDEICETVLDRRPDYSKGLGSGPKPKVRKTMSASSSTTSCLQSTVELQLQAKLDQTMQQIGENTRNHEALVSEVERMWKLIEDMTQQQQGPPYDDP
Homology
[Close]
BLAST of MELO3C029234.2 vs. NCBI nr
Match: XP_008447319.1 (PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 6.4e-21
Identity = 68/104 (65.38%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 1   MSQAAEAAHT--TLEGNRSLSRDEICETVLDRRPDYSKGLGSGPKPKVRKTMSASSSTTS 60
           MSQAAE  H+  TLEGN+ LS DEI ET+LDRR   SKGLG GPKPK  K  SASSS TS
Sbjct: 1   MSQAAEDVHSQPTLEGNQPLSGDEIYETMLDRRSGNSKGLGWGPKPKACKMTSASSSMTS 60

Query: 61  CLQSTVELQLQAKLDQTMQQIGENTRNHEALVSEVERMWKLIED 103
           C QS +ELQLQAK DQ MQQI E TRNHEA     ER  K + D
Sbjct: 61  CPQSIIELQLQAKFDQAMQQIEEQTRNHEA----KERKEKALHD 100

[Close]
BLAST of MELO3C029234.2 vs. TrEMBL
Match: tr|A0A1S3BH46|A0A1S3BH46_CUCME (uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21
Identity = 68/104 (65.38%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 1   MSQAAEAAHT--TLEGNRSLSRDEICETVLDRRPDYSKGLGSGPKPKVRKTMSASSSTTS 60
           MSQAAE  H+  TLEGN+ LS DEI ET+LDRR   SKGLG GPKPK  K  SASSS TS
Sbjct: 1   MSQAAEDVHSQPTLEGNQPLSGDEIYETMLDRRSGNSKGLGWGPKPKACKMTSASSSMTS 60

Query: 61  CLQSTVELQLQAKLDQTMQQIGENTRNHEALVSEVERMWKLIED 103
           C QS +ELQLQAK DQ MQQI E TRNHEA     ER  K + D
Sbjct: 61  CPQSIIELQLQAKFDQAMQQIEEQTRNHEA----KERKEKALHD 100

The following BLAST results are available for this feature:
BLAST of MELO3C029234.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447319.16.4e-2165.38PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo][more]
BLAST of MELO3C029234.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C029234.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029234.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BH46|A0A1S3BH46_CUCME4.2e-2165.38uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029234.2.1MELO3C029234.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..54

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029234.2Silver-seed gourdcarmedB0112
MELO3C029234.2Cucumber (Chinese Long) v3cucmedB538
MELO3C029234.2Watermelon (97103) v2medwmbB194
MELO3C029234.2Watermelon (97103) v2medwmbB218
MELO3C029234.2Wax gourdmedwgoB255
MELO3C029234.2Cucumber (Gy14) v2cgybmedB467
MELO3C029234.2Cucumber (Gy14) v1cgymedB368
MELO3C029234.2Cucurbita maxima (Rimu)cmamedB373
MELO3C029234.2Cucurbita maxima (Rimu)cmamedB930
MELO3C029234.2Cucurbita moschata (Rifu)cmomedB359
MELO3C029234.2Cucurbita pepo (Zucchini)cpemedB145
MELO3C029234.2Cucurbita pepo (Zucchini)cpemedB341
MELO3C029234.2Wild cucumber (PI 183967)cpimedB525
MELO3C029234.2Cucumber (Chinese Long) v2cumedB511
MELO3C029234.2Bottle gourd (USVL1VR-Ls)lsimedB201
MELO3C029234.2Watermelon (Charleston Gray)medwcgB155
MELO3C029234.2Watermelon (Charleston Gray)medwcgB178
MELO3C029234.2Watermelon (97103) v1medwmB181
MELO3C029234.2Watermelon (97103) v1medwmB206