MELO3C029221.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029221.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionATP-dependent helicase 1
Locationchr01 : 31355447 .. 31364970 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAACTGAACCCGTCGCCGGAATCGCCGCCGCCGTGGACGCCGCCATGGAGAAACTGCTCCAGAACCTACAGAAACCGCTGATCTACCCAACAGGAGTGGTTCCGCAGCCGTACGCGCCGCCGTCTGACCAGAAGATGATTCACGCGCCGCCGTCGTTTCACGTCACCGCCCATCCCGTTCCCTTCTACGCGCCGTCAAATGTCCAACCGTCAAACCCTTCCGGCCATCCGCATCCTCATGCGCCGTCTACGAGCTCCGGACAGCATCCCTCAACCGTAAATCTGTCAAATCAGTATAGTAAGCAGCAGCTGTACGTTGACCCTTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCCCAAAACAGATCGGACATTGAAGCGGGCGAATCTTCAACGCATTCCAAACCAACCGAGTTGCCGATGTATTCCAAGAACCCGGTAACTTCGTTCCCTAATTCACAGTCAAATTATATAACTGGCTCTTTGGGTTCGTCTACAGGGAATTTTTCAGGCGAAAAATTAAATGGTCAAAATTATTTTTCTTGGTCCCAATCAATAAAGATGTTCCTCGAAGGTCGATACCAGTTCGGATTCTTAACTGGAGAGACTGTACGTCCTCCACCAGGAGACGCCTTGGAACGACTCTGGAAAGGAGAGGACTCACTTATTCGGTCCATGCTGATTAATAGTATGGAACCACAGATCGGCAAGCCTTTACTATATGCAACCACAGCAAAAGATTTGTGGGATACAACTCAGACCCTTTACTCGAAACGACAGAATGCCTCTCGGTTATATACACTGCGAAAACAGGTCCATAATTGCAAACAAGGGACCCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTGGAAGAGGATCGCACTAATGCCATAGGTGTATTGACTACCCCTACCATTGACTCCGCTGCCTTTAGCGCTCGGTCCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTATGTGTGAGCACTGCAAGAAACAATGGCACATCAATGATCAGTGTTGGAAACTCCACGGTCGTCTCCCAGGAGGTAAGAAACGGTCCTCCAACGAGAAACAGAACTCAGGACGTGCCTACATTAGTGAGACTACACCTGCTAGCACTTCTCAATCAACGGATCCTACTGCGAGCCAGACCAAGACTCCGACTCTGGGTGCCATTGCTCAGTCAGGTATGCCTCAGTCCCTTGGGCTTATTAGCGTTGATGGGAAGAATCCCTGGATCTTAGACTCGGGGGCTACAGATCACTTGACAGGTTCTTCGGAACACTTTATCTCATATGCCCCGTGTGCCGGTAATGAAAAAATCCGAATAGCCGATGGCTCTCTAGCTCCGATCGCTGGCAAAGGACAAATAGTTCCCTTTGACGGTTTTGCTCTCCAGAATGTTTTGCATGTCCCTAAGCTGTCTTACAATTTGTTATCTATAAGCAAGATCACTCGTGAGTTGCATTGTAAAGCTATCTTCTTACCTGAATTGATTTATTTTCAGGACATGAGCTCGGGGAGGACGATTGGCACTGCCCGGCATAGCAGGGGACTTTACATCCTTGATGATGATACCTCATGTAGTAGTTTGTCTAGGGTTAGTTTACTGTCATCCTACTTTAGCACTTCTGAACAAGACTGTATGTTGTGGCATTTTCGACTGGGCCACCCAAACTTTACATATATGCAATATTTATTTCCCCACCTTTTTTCTAAACTTGATGTCTCTTCTCTATCTTGTGATGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

GGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAACTGAACCCGTCGCCGGAATCGCCGCCGCCGTGGACGCCGCCATGGAGAAACTGCTCCAGAACCTACAGAAACCGCTGATCTACCCAACAGGAGTGGTTCCGCAGCCGTACGCGCCGCCGTCTGACCAGAAGATGATTCACGCGCCGCCGTCGTTTCACGTCACCGCCCATCCCGTTCCCTTCTACGCGCCGTCAAATGTCCAACCGTCAAACCCTTCCGGCCATCCGCATCCTCATGCGCCGTCTACGAGCTCCGGACAGCATCCCTCAACCGTAAATCTGTCAAATCAGTATAGTAAGCAGCAGCTGTACGTTGACCCTTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCCCAAAACAGATCGGACATTGAAGCGGGCGAATCTTCAACGCATTCCAAACCAACCGAGTTGCCGATGTATTCCAAGAACCCGGTAACTTCGTTCCCTAATTCACAGTCAAATTATATAACTGGCTCTTTGGGTTCGTCTACAGGGAATTTTTCAGGCGAAAAATTAAATGGTCAAAATTATTTTTCTTGGTCCCAATCAATAAAGATGTTCCTCGAAGGTCGATACCAGTTCGGATTCTTAACTGGAGAGACTGTACGTCCTCCACCAGGAGACGCCTTGGAACGACTCTGGAAAGGAGAGGACTCACTTATTCGGTCCATGCTGATTAATAGTATGGAACCACAGATCGGCAAGCCTTTACTATATGCAACCACAGCAAAAGATTTGTGGGATACAACTCAGACCCTTTACTCGAAACGACAGAATGCCTCTCGGTTATATACACTGCGAAAACAGGTCTTCATACCCAACAGTGTTCATGTTGGACACCCAAAGGCACCTAACACCACCCCACCCACCGTAGCGGTGATTGAACATCAACAAAAGAAGTGGATACAATAA

Coding sequence (CDS)

ATGGTATCAGAGCAAAGCAATAACGAAACCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAACTGAACCCGTCGCCGGAATCGCCGCCGCCGTGGACGCCGCCATGGAGAAACTGCTCCAGAACCTACAGAAACCGCTGATCTACCCAACAGGAGTGGTTCCGCAGCCGTACGCGCCGCCGTCTGACCAGAAGATGATTCACGCGCCGCCGTCGTTTCACGTCACCGCCCATCCCGTTCCCTTCTACGCGCCGTCAAATGTCCAACCGTCAAACCCTTCCGGCCATCCGCATCCTCATGCGCCGTCTACGAGCTCCGGACAGCATCCCTCAACCGTAAATCTGTCAAATCAGTATAGTAAGCAGCAGCTGTACGTTGACCCTTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCCCAAAACAGATCGGACATTGAAGCGGGCGAATCTTCAACGCATTCCAAACCAACCGAGTTGCCGATGTATTCCAAGAACCCGGTAACTTCGTTCCCTAATTCACAGTCAAATTATATAACTGGCTCTTTGGGTTCGTCTACAGGGAATTTTTCAGGCGAAAAATTAAATGGTCAAAATTATTTTTCTTGGTCCCAATCAATAAAGATGTTCCTCGAAGGTCGATACCAGTTCGGATTCTTAACTGGAGAGACTGTACGTCCTCCACCAGGAGACGCCTTGGAACGACTCTGGAAAGGAGAGGACTCACTTATTCGGTCCATGCTGATTAATAGTATGGAACCACAGATCGGCAAGCCTTTACTATATGCAACCACAGCAAAAGATTTGTGGGATACAACTCAGACCCTTTACTCGAAACGACAGAATGCCTCTCGGTTATATACACTGCGAAAACAGGTCTTCATACCCAACAGTGTTCATGTTGGACACCCAAAGGCACCTAACACCACCCCACCCACCGTAGCGGTGATTGAACATCAACAAAAGAAGTGGATACAATAA

Protein sequence

MVSEQSNNETLENNLGETQIETEPVAGIAAAVDAAMEKLLQNLQKPLIYPTGVVPQPYAPPSDQKMIHAPPSFHVTAHPVPFYAPSNVQPSNPSGHPHPHAPSTSSGQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSKPTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVFIPNSVHVGHPKAPNTTPPTVAVIEHQQKKWIQ
Homology
[Close]
BLAST of MELO3C029221.2 vs. NCBI nr
Match: XP_019074276.1 (PREDICTED: uncharacterized protein LOC109122249, partial [Vitis vinifera])

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-21
Identity = 60/150 (40.00%), Postives = 92/150 (61.33%), Query Frame = 0 

Query: 148 IEAGESSTHSKPTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQ 207
           ++A   S H + +E+   S  PV +F NS              + + EKLNG+NY  W+Q
Sbjct: 1   MDAQRGSNHERVSEIHS-SMGPVGAFDNSPL------------HLTIEKLNGKNYREWAQ 60

Query: 208 SIKMFLEGRYQFGFLTGETVRPPPGD-ALERLWKGEDSLIRSMLINSMEPQIGKPLLYAT 267
           +IK+ ++G+ + GFLTGET RPPP D A  + W+ E+S I S L NSM+P IGK  ++  
Sbjct: 61  AIKLVIDGKGKLGFLTGETRRPPPTDVAASQKWRSENSFITSCLSNSMKPSIGKTYMFLP 120

Query: 268 TAKDLWDTTQTLYSKRQNASRLYTLRKQVF 297
           TAKD+WD  Q  YS  +NAS+++ ++ +++
Sbjct: 121 TAKDVWDAIQETYSDAENASQIFEIKTRLW 137

[Close]
BLAST of MELO3C029221.2 vs. NCBI nr
Match: CAN73102.1 (hypothetical protein VITISV_042891 [Vitis vinifera])

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-20
Identity = 59/150 (39.33%), Postives = 91/150 (60.67%), Query Frame = 0 

Query: 148 IEAGESSTHSKPTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQ 207
           ++A   S H + +E+   S  PV +F NS              + + EKLNG+NY  W+Q
Sbjct: 1   MDAQRGSNHERVSEIHS-SMGPVGAFDNSPL------------HLTIEKLNGKNYREWAQ 60

Query: 208 SIKMFLEGRYQFGFLTGETVRPPPGD-ALERLWKGEDSLIRSMLINSMEPQIGKPLLYAT 267
           +IK+ ++G+ + GFLTGET RPPP D A  + W+ E+S I S L NSM+P IGK  ++  
Sbjct: 61  AIKLVIDGKGKLGFLTGETRRPPPTDVAASQKWRSENSFITSCLXNSMKPSIGKTYMFLP 120

Query: 268 TAKDLWDTTQTLYSKRQNASRLYTLRKQVF 297
           TAKD+WD     YS  +NAS+++ ++ +++
Sbjct: 121 TAKDVWDAIXETYSDAENASQIFEIKTRLW 137

[Close]
BLAST of MELO3C029221.2 vs. NCBI nr
Match: CAN82103.1 (hypothetical protein VITISV_035488 [Vitis vinifera])

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-20
Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = 0 

Query: 143 QNRSDIEAGESSTHSKPTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNY 202
           Q   + E+ +S TH + +E+   S  PV +F NS              +F+ EKLNG+NY
Sbjct: 4   QRGDNHESNQSETHERVSEIHS-SMGPVGAFDNSPL------------HFTIEKLNGKNY 63

Query: 203 FSWSQSIKMFLEGRYQFGFLTGETVRPPPGD-ALERLWKGEDSLIRSMLINSMEPQIGKP 262
            +W+Q+IK+ ++ + + G LT ET RPPP D A  + W+ ++S I S LINSM+P IGK 
Sbjct: 64  RAWAQAIKLVIDEKGKLGHLTSETRRPPPTDVAASQKWRSKNSFITSCLINSMKPAIGKT 123

Query: 263 LLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVFI 298
            ++  TAKD+WD  +  YS   NAS+++ L+ ++++
Sbjct: 124 YMFLPTAKDVWDVIRETYSDAXNASQIFELKTRLYV 146

[Close]
BLAST of MELO3C029221.2 vs. NCBI nr
Match: EXB53954.1 (ATP-dependent helicase 1 [Morus notabilis])

HSP 1 Score: 107.8 bits (268), Expect = 6.9e-20
Identity = 47/101 (46.53%), Postives = 72/101 (71.29%), Query Frame = 0 

Query: 196 KLNGQNYFSWSQSIKMFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSME 255
           KLNGQNY  W+QS+K+ ++GR + G LTGE  +P  GD   + W+ E+SL+ + LINSME
Sbjct: 489 KLNGQNYLEWAQSVKLVIDGRGKIGHLTGEISKPVVGDPHLKKWQSENSLVIAWLINSME 548

Query: 256 PQIGKPLLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVF 297
           P IGKP L+  TA+++W+  + LYS  +N S+++ L+ Q++
Sbjct: 549 PTIGKPHLFLRTAREVWEAVRDLYSDLENPSQIFELKTQLW 589

[Close]
BLAST of MELO3C029221.2 vs. NCBI nr
Match: KZV18803.1 (hypothetical protein F511_37198 [Dorcoceras hygrometricum])

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19
Identity = 53/131 (40.46%), Postives = 83/131 (63.36%), Query Frame = 0 

Query: 166 SKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQFGFLTGE 225
           S+ P   FP   +    G L  S+ + +  KLNG+N+  W+QSIK+ +EGR + G+LTG+
Sbjct: 9   SRAPDQKFPEVYTVSPNG-LEHSSVHITIHKLNGKNFLEWAQSIKLIIEGRGRLGYLTGD 68

Query: 226 TVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTLYSKRQNA 285
           T  P  GD     WK E+S++ + LINSMEP IG+  L+  TAKD+W+  +  YS  +N+
Sbjct: 69  TREPEKGDPKWSSWKSENSMVMAWLINSMEPPIGRTYLFLPTAKDIWEAVRETYSDLENS 128

Query: 286 SRLYTLRKQVF 297
           S++Y L+ +++
Sbjct: 129 SQIYDLKTRLW 138

[Close]
BLAST of MELO3C029221.2 vs. TAIR10
Match: AT1G21280.1 (Retrotransposon gag protein (InterPro:IPR005162))

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-07
Identity = 29/107 (27.10%), Postives = 60/107 (56.07%), Query Frame = 0 

Query: 191 NFSGEKL--NGQNYFSWSQSIKMFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRS 250
           +FS +KL  +  NY +W    + FL    +FGF+ G   +P P   L + W+  ++++  
Sbjct: 29  DFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMY 88

Query: 251 MLINSMEPQIGKPLLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQV 296
            L+NSM  ++ + ++YA TA  +W+  + ++    +  ++Y LR+++
Sbjct: 89  WLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDL-KIYQLRRRL 134

[Close]
BLAST of MELO3C029221.2 vs. TrEMBL
Match: tr|A5AFJ8|A5AFJ8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_035488 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 7.0e-21
Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = 0 

Query: 143 QNRSDIEAGESSTHSKPTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNY 202
           Q   + E+ +S TH + +E+   S  PV +F NS              +F+ EKLNG+NY
Sbjct: 4   QRGDNHESNQSETHERVSEIHS-SMGPVGAFDNSPL------------HFTIEKLNGKNY 63

Query: 203 FSWSQSIKMFLEGRYQFGFLTGETVRPPPGD-ALERLWKGEDSLIRSMLINSMEPQIGKP 262
            +W+Q+IK+ ++ + + G LT ET RPPP D A  + W+ ++S I S LINSM+P IGK 
Sbjct: 64  RAWAQAIKLVIDEKGKLGHLTSETRRPPPTDVAASQKWRSKNSFITSCLINSMKPAIGKT 123

Query: 263 LLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVFI 298
            ++  TAKD+WD  +  YS   NAS+++ L+ ++++
Sbjct: 124 YMFLPTAKDVWDVIRETYSDAXNASQIFELKTRLYV 146

[Close]
BLAST of MELO3C029221.2 vs. TrEMBL
Match: tr|A5C6A5|A5C6A5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042891 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 7.0e-21
Identity = 59/150 (39.33%), Postives = 91/150 (60.67%), Query Frame = 0 

Query: 148 IEAGESSTHSKPTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQ 207
           ++A   S H + +E+   S  PV +F NS              + + EKLNG+NY  W+Q
Sbjct: 1   MDAQRGSNHERVSEIHS-SMGPVGAFDNSPL------------HLTIEKLNGKNYREWAQ 60

Query: 208 SIKMFLEGRYQFGFLTGETVRPPPGD-ALERLWKGEDSLIRSMLINSMEPQIGKPLLYAT 267
           +IK+ ++G+ + GFLTGET RPPP D A  + W+ E+S I S L NSM+P IGK  ++  
Sbjct: 61  AIKLVIDGKGKLGFLTGETRRPPPTDVAASQKWRSENSFITSCLXNSMKPSIGKTYMFLP 120

Query: 268 TAKDLWDTTQTLYSKRQNASRLYTLRKQVF 297
           TAKD+WD     YS  +NAS+++ ++ +++
Sbjct: 121 TAKDVWDAIXETYSDAENASQIFEIKTRLW 137

[Close]
BLAST of MELO3C029221.2 vs. TrEMBL
Match: tr|W9RFP2|W9RFP2_9ROSA (ATP-dependent helicase 1 OS=Morus notabilis OX=981085 GN=L484_022922 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.6e-20
Identity = 47/101 (46.53%), Postives = 72/101 (71.29%), Query Frame = 0 

Query: 196 KLNGQNYFSWSQSIKMFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSME 255
           KLNGQNY  W+QS+K+ ++GR + G LTGE  +P  GD   + W+ E+SL+ + LINSME
Sbjct: 489 KLNGQNYLEWAQSVKLVIDGRGKIGHLTGEISKPVVGDPHLKKWQSENSLVIAWLINSME 548

Query: 256 PQIGKPLLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVF 297
           P IGKP L+  TA+++W+  + LYS  +N S+++ L+ Q++
Sbjct: 549 PTIGKPHLFLRTAREVWEAVRDLYSDLENPSQIFELKTQLW 589

[Close]
BLAST of MELO3C029221.2 vs. TrEMBL
Match: tr|A0A1U8NVX5|A0A1U8NVX5_GOSHI (uncharacterized protein LOC107951630 OS=Gossypium hirsutum OX=3635 GN=LOC107951630 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 0 

Query: 193 SGEKLNGQNYFSWSQSIKMFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLIN 252
           S  KLNG+NY  WSQS+K+ ++GR + G L GE  +P  GD     W+ E+S++ + LIN
Sbjct: 45  SSHKLNGKNYLEWSQSVKLAIDGRGKLGHLNGEIEQPQVGDPKMSKWRSENSMVIAWLIN 104

Query: 253 SMEPQIGKPLLYATTAKDLWDTTQTLYSKRQNASRLYTLR 293
           SME  IGKP L+  TAKD+WD  +  YS  +NAS+++ L+
Sbjct: 105 SMEASIGKPFLFLPTAKDVWDAVKDTYSDLENASQIFELK 144

[Close]
BLAST of MELO3C029221.2 vs. TrEMBL
Match: tr|A5AUV4|A5AUV4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_018874 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.9e-19
Identity = 56/155 (36.13%), Postives = 91/155 (58.71%), Query Frame = 0 

Query: 143 QNRSDIEAGESSTHSKPTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNY 202
           Q     E+ +S+TH + +E+             + S    G+  +S  + + EKLNG+NY
Sbjct: 4   QKEDSHESSQSATHERESEI-------------NSSMGSAGAFDNSPLHLTVEKLNGKNY 63

Query: 203 FSWSQSIKMFLEGRYQFGFLTGETVRPP-PGDALERLWKGEDSLIRSMLINSMEPQIGKP 262
             W+Q+IK+ ++G+ + GFL GET RPP    A  + W+ E+S I S LINSM+P IGK 
Sbjct: 64  KEWAQAIKLIIDGKGKLGFLIGETWRPPLTNAAASQKWRSENSFITSCLINSMKPAIGKT 123

Query: 263 LLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVF 297
            ++   AKD+WD  +  YS  +NAS+++ L+ +++
Sbjct: 124 YMFLPKAKDVWDGIRETYSDAENASQIFELKTRLW 145

The following BLAST results are available for this feature:
BLAST of MELO3C029221.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_019074276.12.8e-2140.00PREDICTED: uncharacterized protein LOC109122249, partial [Vitis vinifera][more]
CAN73102.11.1e-2039.33hypothetical protein VITISV_042891 [Vitis vinifera][more]
CAN82103.11.1e-2038.46hypothetical protein VITISV_035488 [Vitis vinifera][more]
EXB53954.16.9e-2046.53ATP-dependent helicase 1 [Morus notabilis][more]
KZV18803.11.5e-1940.46hypothetical protein F511_37198 [Dorcoceras hygrometricum][more]
BLAST of MELO3C029221.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21280.12.1e-0727.10Retrotransposon gag protein (InterPro:IPR005162)[more]
BLAST of MELO3C029221.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029221.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A5AFJ8|A5AFJ8_VITVI7.0e-2138.46Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_035488 PE=4 SV=1[more]
tr|A5C6A5|A5C6A5_VITVI7.0e-2139.33Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042891 PE=4 SV=1[more]
tr|W9RFP2|W9RFP2_9ROSA4.6e-2046.53ATP-dependent helicase 1 OS=Morus notabilis OX=981085 GN=L484_022922 PE=4 SV=1[more]
tr|A0A1U8NVX5|A0A1U8NVX5_GOSHI1.7e-1947.00uncharacterized protein LOC107951630 OS=Gossypium hirsutum OX=3635 GN=LOC1079516... [more]
tr|A5AUV4|A5AUV4_VITVI3.9e-1936.13Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_018874 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029472UBN2_3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029221.2.1MELO3C029221.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..165
NoneNo IPR availablePANTHERPTHR37610:SF3SUBFAMILY NOT NAMEDcoord: 186..295
NoneNo IPR availablePANTHERPTHR37610FAMILY NOT NAMEDcoord: 186..295
IPR029472Gag-polypeptide of LTR copia-typePFAMPF14244Retrotran_gag_3coord: 196..230
e-value: 3.4E-7
score: 29.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029221.2Cucumber (Gy14) v2cgybmedB470
MELO3C029221.2Cucumber (Gy14) v1cgymedB092
MELO3C029221.2Cucurbita maxima (Rimu)cmamedB380
MELO3C029221.2Cucurbita maxima (Rimu)cmamedB923
MELO3C029221.2Cucurbita moschata (Rifu)cmomedB366
MELO3C029221.2Cucurbita moschata (Rifu)cmomedB912
MELO3C029221.2Cucurbita pepo (Zucchini)cpemedB151
MELO3C029221.2Cucurbita pepo (Zucchini)cpemedB154
MELO3C029221.2Cucurbita pepo (Zucchini)cpemedB348
MELO3C029221.2Wild cucumber (PI 183967)cpimedB528
MELO3C029221.2Cucumber (Chinese Long) v2cumedB514
MELO3C029221.2Bottle gourd (USVL1VR-Ls)lsimedB195
MELO3C029221.2Watermelon (Charleston Gray)medwcgB170
MELO3C029221.2Watermelon (97103) v1medwmB195
MELO3C029221.2Silver-seed gourdcarmedB0115
MELO3C029221.2Silver-seed gourdcarmedB0860
MELO3C029221.2Cucumber (Chinese Long) v3cucmedB541
MELO3C029221.2Watermelon (97103) v2medwmbB208
MELO3C029221.2Wax gourdmedwgoB255