MELO3C029207.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C029207.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr01 : 30275210 .. 30277490 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAATAATAAGCGTCTTCCACATACATCGTCCGATACACGCCATAGAATTAGGGAGCTTGCGTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAGAGCACGCGGATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACTGAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTACACGTCCTTGCTCATGTCGTGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTTCTGTGAGACAGTATCTCGACATTTTAACATCGTATTGTTGGTTGTTGTTCAACTGTATGAGGAGTTGATAAAGAGACCTGTTCCGGTAATATATAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGATAGAAGTTCACTGTATTTGACCTTTACATCCGTCGCACTTATTTCAGCGTCTTTATTTGAACCTGCAGAATTGCCTTGGTGCGTTAGACGGGACGTACATAAAGGTCAACGTCCCCGCAGGAGATTGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTAGGTGTGTGTGACACGAAAGGGGATTTCGTTTATGTCCTTGCCAGTTGGGAAGGATCCGCAGCAGACTCGTGGATTCTACGTGATGCCCTTTCATGAAAAAATGGACTACAAGTGCCAAAGGGTATATTATTTATAATAAAACACCGTCGCTTCCTACTTACCTATTAAAAGTGCTTAAACGAATGATTTAATAACAAGATATTATTATCTGTGCGATGCGGGTTATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGCCGTGGTGCTGCAAATGCACCAACAAATCCAAAGGAGTACTTCAATATGAAGCACTCCTCGGCAAGGAATGTCATTGAGCGCGTGTTTGGTGTTCTTAAGGGTCGTTGGGTCATTCTTCGTGGAAAGTCGTACTATCCCCTGCAAATCCAATGTCGCACCATACTAGCATGTGCCTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGAGAACATTGACGATGTGGATGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGCCGAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAGATAAGACAATATTACATTACAAGTCTTCGATTGTAATGTTGAATTTCTATCATGTGTAAAATGTACTGTAAAATGTAATATCGGGTGTTGCATATGAAATGTACGCGTGCCTTTTGTTTTTAACTGTTAAATTGTGAAATTACTAACGTACTCCATGTATTTTTTGTAATTTGTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCAAGACATGTCTGGACGAAGGAGAAGGAGGGCACTCTTGTGGAATGTTTAGTGGAGTTGGTGTAAATGGGGGGATGGAAATCAGATAATGGTACGTTCTGTCCAGGTTACCTTATGCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATCGCCGAAATGCGGGGGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTACGGAGAAAGAATTATTTGATAATTGGGTTAGGGTAAGGAAAATAATATAAACGTCACACAACGTTCACAATGTACATTTACTTAACAATTTTTCAATCAGTACTCATACGTGATATTTTTTTTCCCACAGTCGCATCATGCAGCGAAGAGACTCCTGAACAAACCATTCCCGTATTATGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGAGTCGGTTAGCTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTGACAGATATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTACCACCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACAATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAGATCGAGTGGATCCAAGAGAAAGAGGAGAAGTCAGCGAGACTTGGATGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAAGCAGATTGCGGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGTGCACGGAATAA

mRNA sequence

ATGAACAATAATAAGCGTCTTCCACATACATCGTCCGATACACGCCATAGAATTAGGGAGCTTGCGTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAGAGCACGCGGATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACTGAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTACACGTCCTTGCTCATGTCGTGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTTCTGTGAGACAGTATCTCGACATTTTAACATCGTATTGTTGGTTGTTGTTCAACTGTATGAGGAGTTGATAAAGAGACCTGTTCCGTATGTCAACCTCAAATCGTGCCCCAAGACATGTCTGGACGAAGGAGAAGGAGGGCACTCTTGTGGAATGTTTAGTGGAGTTGGTTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATCGCCGAAATGCGGGGGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTACGGAGAAAGAATTATTTGATAATTGGGTTAGGTCGCATCATGCAGCGAAGAGACTCCTGAACAAACCATTCCCGTATTATGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGAGTCGGTTAGCTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTGACAGATATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTACCACCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACAATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAGATCGAGTGGATCCAAGAGAAAGAGGAGAAGTCAGCGAGACTTGGATGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAAGCAGATTGCGGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGTGCACGGAATAA

Coding sequence (CDS)

ATGAACAATAATAAGCGTCTTCCACATACATCGTCCGATACACGCCATAGAATTAGGGAGCTTGCGTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAGAGCACGCGGATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACTGAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTACACGTCCTTGCTCATGTCGTGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTTCTGTGAGACAGTATCTCGACATTTTAACATCGTATTGTTGGTTGTTGTTCAACTGTATGAGGAGTTGATAAAGAGACCTGTTCCGTATGTCAACCTCAAATCGTGCCCCAAGACATGTCTGGACGAAGGAGAAGGAGGGCACTCTTGTGGAATGTTTAGTGGAGTTGGTTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATCGCCGAAATGCGGGGGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTACGGAGAAAGAATTATTTGATAATTGGGTTAGGTCGCATCATGCAGCGAAGAGACTCCTGAACAAACCATTCCCGTATTATGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGAGTCGGTTAGCTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTGACAGATATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTACCACCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACAATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAGATCGAGTGGATCCAAGAGAAAGAGGAGAAGTCAGCGAGACTTGGATGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAAGCAGATTGCGGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGTGCACGGAATAA

Protein sequence

MNNNKRLPHTSSDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHVVKNRVIQREFVRFCETVSRHFNIVLLVVVQLYEELIKRPVPYVNLKSCPKTCLDEGEGGHSCGMFSGVGLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETFADVGSNEPDRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRKRRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHVCTE

Homology

[Close]

BLAST of MELO3C029207.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 411.4 bits (1056), Expect = 3.1e-111
Identity = 269/569 (47.28%), Postives = 285/569 (50.09%), Query Frame = 0


Query: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHVVKNRV 85
           MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAH VKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 86  IQREFVRFCETVSRHFNIVLLVVVQLYEELIKRPVP------------------------ 145
           IQ+EFVR  ETVSRHFNIVLL V++LYEELIKRPVP                        
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 146 ------------------------------------------------------------ 205
                                                                       
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 206 -----------------------------------------------YVNLKSCP----- 265
                                                          Y N+K        
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 266 --------------------------KTCL----------------------DEGE---- 325
                                     +T L                      DEG+    
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 326 -----------------------------------GGHSCGM-FSGVG------------ 354
                                              GG SCGM    +G            
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGMELVSMGGWKSDNGTFRPG 360

[Close]

BLAST of MELO3C029207.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 222.2 bits (565), Expect = 2.7e-54
Identity = 183/591 (30.96%), Postives = 238/591 (40.27%), Query Frame = 0


Query: 2   NNNKRLPHTSSDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSST 61
           N+ KR+ H   +TRHRIR+LAYFRMIH +                        +AGL+ST
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIHGT------------------------IAGLTST 88

Query: 62  EIVDVEEMVAMFLHVLAHVVKNRVIQREFVRFCETVSRHFNIVLLVVVQLYEELIKRPVP 121
           E+VDVEEMVAMFLH+LAH VK+RVI+REF+R  ET+SRHFN+VLL V++L+EEL+K+P P
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQP 148

Query: 122 YVN---------LKSC-------------------------------------------- 181
             N          ++C                                            
Sbjct: 149 VPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 209 VLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWR 268

Query: 242 -----PKT------------------------------------------------CL-- 301
                P T                                                CL  
Sbjct: 269 GPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLH 328

Query: 302 ----------------DEGEGGHSC----------------------------------- 341
                           DE +  H+                                    
Sbjct: 329 NLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRLPK 388

[Close]

BLAST of MELO3C029207.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51
Identity = 105/193 (54.40%), Postives = 144/193 (74.61%), Query Frame = 0


Query: 150 LVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKEL 209
           L R+MAEKLPG  ++ ++ IDC +K+LK+T+ AIAEMRGP+CSGFGWN+E +CII E++L
Sbjct: 48  LQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDL 107

Query: 210 FDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETFADVGSNEPDRY-DRFDMG 269
           FD+W++SH AAK LL+K FPYYD+L+YVFG+DRAT   +ETF +VGSN  + + D   +G
Sbjct: 108 FDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLG 167

Query: 270 DG-NEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRKRRSQRDLDVEAIHLALD 329
           D  +E++P +YSQG+ +S + +   R  +ASE R  SS SKRKR S+R   VE I   ++
Sbjct: 168 DSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVME 227

Query: 330 QTNEQLKQIAEWP 341
             NEQLK IA+WP
Sbjct: 228 FGNEQLKAIADWP 240

[Close]

BLAST of MELO3C029207.2 vs. NCBI nr
Match: XP_016899496.1 (PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 4.3e-44
Identity = 98/124 (79.03%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MNNNKRLPHTSSDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60
           MN+N+R+ +T  DT +RIR+LAYFRMIHESDLVCRQSTRMDRRTFAILCHLLR V+ LSS
Sbjct: 28  MNDNRRITYTPFDTCNRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRTVSVLSS 87

Query: 61  TEIVDVEEMVAMFLHVLAHVVKNRVIQREFVRFCETVSRHFNIVLLVVVQLYEELIKRPV 120
            EI+DVEEMVAMFLHVLAH VKN VIQR+FVR  ETVSRHFN+VLLVVV+LYE+LIKRPV
Sbjct: 88  IEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRSGETVSRHFNLVLLVVVRLYEKLIKRPV 147

Query: 121 PYVN 125
              N
Sbjct: 148 SVTN 151

[Close]

BLAST of MELO3C029207.2 vs. NCBI nr
Match: XP_016899497.1 (PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 4.3e-44
Identity = 88/103 (85.44%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 153 IMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKELFDN 212
           +MAEKLPGCQV ATTVID RIKTLK+TFQAIAEMRGPACSG GWND+EKCII EK LFDN
Sbjct: 1   MMAEKLPGCQVHATTVIDSRIKTLKQTFQAIAEMRGPACSGLGWNDKEKCIIAEKGLFDN 60

Query: 213 WVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETFADVG 256
           WVRS+ AAK LLNK FPYYDELTYVFGRD+AT R AETFADVG
Sbjct: 61  WVRSYPAAKELLNKLFPYYDELTYVFGRDKATGRFAETFADVG 103

[Close]

BLAST of MELO3C029207.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 55.8 bits (133), Expect = 6.1e-08
Identity = 29/94 (30.85%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 24  FRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHVVKN 83
           +++++  +  C ++ RMD+  F  LC LL+    L  T  + +E  +A+FL ++ H ++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 84  RVIQREFVRFCETVSRHFNIVLLVVVQLYEELIK 118
           R +Q  F    ET+SRHFN VL  V+ + ++  +
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQ 125

[Close]

BLAST of MELO3C029207.2 vs. TAIR10
Match: AT4G02210.1 (unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06
Identity = 31/119 (26.05%), Postives = 55/119 (46.22%), Query Frame = 0


Query: 168 VIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKP 227
           V+  R K+L+R F AI  +      GF W++E + +  +  ++ +++++H  A++ + +P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 228 FPYYDELTYVFGRDRATSRLAETFADVGSNEPDRYDRFDMGDGNEELPPVYSQG-IDLS 286
            PYY +L  + G             D G  E + +   D  D   E     S G  DLS
Sbjct: 296 IPYYKDLCVLCG-------------DSGIEENECFVAMDWFDPETEFQEFKSSGTTDLS 339

[Close]

BLAST of MELO3C029207.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.1e-111
Identity = 269/569 (47.28%), Postives = 285/569 (50.09%), Query Frame = 0


Query: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHVVKNRV 85
           MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAH VKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 86  IQREFVRFCETVSRHFNIVLLVVVQLYEELIKRPVP------------------------ 145
           IQ+EFVR  ETVSRHFNIVLL V++LYEELIKRPVP                        
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 146 ------------------------------------------------------------ 205
                                                                       
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 206 -----------------------------------------------YVNLKSCP----- 265
                                                          Y N+K        
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 266 --------------------------KTCL----------------------DEGE---- 325
                                     +T L                      DEG+    
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 326 -----------------------------------GGHSCGM-FSGVG------------ 354
                                              GG SCGM    +G            
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGMELVSMGGWKSDNGTFRPG 360

[Close]

BLAST of MELO3C029207.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.8e-54
Identity = 183/591 (30.96%), Postives = 238/591 (40.27%), Query Frame = 0


Query: 2   NNNKRLPHTSSDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSST 61
           N+ KR+ H   +TRHRIR+LAYFRMIH +                        +AGL+ST
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIHGT------------------------IAGLTST 88

Query: 62  EIVDVEEMVAMFLHVLAHVVKNRVIQREFVRFCETVSRHFNIVLLVVVQLYEELIKRPVP 121
           E+VDVEEMVAMFLH+LAH VK+RVI+REF+R  ET+SRHFN+VLL V++L+EEL+K+P P
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQP 148

Query: 122 YVN---------LKSC-------------------------------------------- 181
             N          ++C                                            
Sbjct: 149 VPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 209 VLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWR 268

Query: 242 -----PKT------------------------------------------------CL-- 301
                P T                                                CL  
Sbjct: 269 GPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLH 328

Query: 302 ----------------DEGEGGHSC----------------------------------- 341
                           DE +  H+                                    
Sbjct: 329 NLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRLPK 388

[Close]

BLAST of MELO3C029207.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.4e-51
Identity = 105/193 (54.40%), Postives = 144/193 (74.61%), Query Frame = 0


Query: 150 LVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKEL 209
           L R+MAEKLPG  ++ ++ IDC +K+LK+T+ AIAEMRGP+CSGFGWN+E +CII E++L
Sbjct: 48  LQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDL 107

Query: 210 FDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETFADVGSNEPDRY-DRFDMG 269
           FD+W++SH AAK LL+K FPYYD+L+YVFG+DRAT   +ETF +VGSN  + + D   +G
Sbjct: 108 FDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLG 167

Query: 270 DG-NEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRKRRSQRDLDVEAIHLALD 329
           D  +E++P +YSQG+ +S + +   R  +ASE R  SS SKRKR S+R   VE I   ++
Sbjct: 168 DSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVME 227

Query: 330 QTNEQLKQIAEWP 341
             NEQLK IA+WP
Sbjct: 228 FGNEQLKAIADWP 240

[Close]

BLAST of MELO3C029207.2 vs. TrEMBL
Match: tr|A0A1S4DU21|A0A1S4DU21_CUCME (uncharacterized protein LOC107990554 OS=Cucumis melo OX=3656 GN=LOC107990554 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 88/103 (85.44%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 153 IMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKELFDN 212
           +MAEKLPGCQV ATTVID RIKTLK+TFQAIAEMRGPACSG GWND+EKCII EK LFDN
Sbjct: 1   MMAEKLPGCQVHATTVIDSRIKTLKQTFQAIAEMRGPACSGLGWNDKEKCIIAEKGLFDN 60

Query: 213 WVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETFADVG 256
           WVRS+ AAK LLNK FPYYDELTYVFGRD+AT R AETFADVG
Sbjct: 61  WVRSYPAAKELLNKLFPYYDELTYVFGRDKATGRFAETFADVG 103

[Close]

BLAST of MELO3C029207.2 vs. TrEMBL
Match: tr|A0A1S4DU32|A0A1S4DU32_CUCME (uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 98/124 (79.03%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MNNNKRLPHTSSDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60
           MN+N+R+ +T  DT +RIR+LAYFRMIHESDLVCRQSTRMDRRTFAILCHLLR V+ LSS
Sbjct: 28  MNDNRRITYTPFDTCNRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRTVSVLSS 87

Query: 61  TEIVDVEEMVAMFLHVLAHVVKNRVIQREFVRFCETVSRHFNIVLLVVVQLYEELIKRPV 120
            EI+DVEEMVAMFLHVLAH VKN VIQR+FVR  ETVSRHFN+VLLVVV+LYE+LIKRPV
Sbjct: 88  IEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRSGETVSRHFNLVLLVVVRLYEKLIKRPV 147

Query: 121 PYVN 125
              N
Sbjct: 148 SVTN 151

The following BLAST results are available for this feature:

BLAST of MELO3C029207.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33754.1	3.1e-111	47.28	retrotransposon protein [Cucumis melo subsp. melo]	[more]
ADN34114.1	2.7e-54	30.96	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008441954.1	2.1e-51	54.40	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
XP_016899496.1	4.3e-44	79.03	PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo]	[more]
XP_016899497.1	4.3e-44	85.44	PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo]	[more]

BLAST of MELO3C029207.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41980.1	6.1e-08	30.85	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT4G02210.1	1.5e-06	26.05	unknown protein	[more]

BLAST of MELO3C029207.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C029207.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBB2\|E5GBB2_CUCME	2.1e-111	47.28	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|E5GCB5\|E5GCB5_CUCME	1.8e-54	30.96	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	1.4e-51	54.40	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|A0A1S4DU21\|A0A1S4DU21_CUCME	2.9e-44	85.44	uncharacterized protein LOC107990554 OS=Cucumis melo OX=3656 GN=LOC107990554 PE=...	[more]
tr\|A0A1S4DU32\|A0A1S4DU32_CUCME	2.9e-44	79.03	uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029207.2.1	MELO3C029207.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..316
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 138..255
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 138..255

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C029207.2	Melon (DHL92) v3.6.1	medmedB092
MELO3C029207.2	Melon (DHL92) v3.6.1	medmedB093
MELO3C029207.2	Bottle gourd (USVL1VR-Ls)	lsimedB195
MELO3C029207.2	Bottle gourd (USVL1VR-Ls)	lsimedB205
MELO3C029207.2	Watermelon (Charleston Gray)	medwcgB161
MELO3C029207.2	Watermelon (Charleston Gray)	medwcgB206
MELO3C029207.2	Watermelon (97103) v1	medwmB187
MELO3C029207.2	Watermelon (97103) v1	medwmB223
MELO3C029207.2	Watermelon (97103) v1	medwmB228
MELO3C029207.2	Silver-seed gourd	carmedB0056
MELO3C029207.2	Silver-seed gourd	carmedB0113
MELO3C029207.2	Cucumber (Chinese Long) v3	cucmedB179
MELO3C029207.2	Cucumber (Chinese Long) v3	cucmedB183
MELO3C029207.2	Cucumber (Chinese Long) v3	cucmedB526
MELO3C029207.2	Watermelon (97103) v2	medwmbB180
MELO3C029207.2	Watermelon (97103) v2	medwmbB199
MELO3C029207.2	Wax gourd	medwgoB211
MELO3C029207.2	Wax gourd	medwgoB246
MELO3C029207.2	Wax gourd	medwgoB261
MELO3C029207.2	Cucumber (Gy14) v2	cgybmedB456
MELO3C029207.2	Cucurbita maxima (Rimu)	cmamedB376
MELO3C029207.2	Cucurbita maxima (Rimu)	cmamedB380
MELO3C029207.2	Cucurbita maxima (Rimu)	cmamedB935
MELO3C029207.2	Cucurbita maxima (Rimu)	cmamedB923
MELO3C029207.2	Cucurbita moschata (Rifu)	cmomedB362
MELO3C029207.2	Cucurbita moschata (Rifu)	cmomedB366
MELO3C029207.2	Cucurbita moschata (Rifu)	cmomedB924
MELO3C029207.2	Cucurbita moschata (Rifu)	cmomedB912
MELO3C029207.2	Cucurbita pepo (Zucchini)	cpemedB148
MELO3C029207.2	Cucurbita pepo (Zucchini)	cpemedB151
MELO3C029207.2	Cucurbita pepo (Zucchini)	cpemedB344
MELO3C029207.2	Cucurbita pepo (Zucchini)	cpemedB348
MELO3C029207.2	Cucurbita pepo (Zucchini)	cpemedB666
MELO3C029207.2	Wild cucumber (PI 183967)	cpimedB176
MELO3C029207.2	Wild cucumber (PI 183967)	cpimedB513
MELO3C029207.2	Cucumber (Chinese Long) v2	cumedB177
MELO3C029207.2	Cucumber (Chinese Long) v2	cumedB502