MELO3C029139.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C029139.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionReverse transcriptase
Locationchr01 : 25213905 .. 25216787 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAATTGGTCTTCAAATGTAATTTTTTTTAATTTCCTCCCTTTCCCTTCCCTTTTGAGAGTGTGATCAATTATAATGATGTAGTTTTTCATATTTATTTTTGTTGTAATTTCGTTAATTAATTTTAAGGTGACTTTAATTTTGTTAGAGTTAGGCCTAGGCCAATTGGGTTTACGGTGCTTTTATTGTTAGTTCAAATTTAGGTCAATTGAATTTATTGTTGCTTAGGTCAATTAAATTTATTGTTGCATCAAATTTAATAGTTTGCGAGGTTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTTTTATGTTTTGTCGAAGGGCTGAAACTGTGGGCAAAGACCAAGTTGTATGAAGAAAAGGTTCAACACTTCACGTCAACGTATTCAGTAGCCGAATGGTTGTTCGATCTGATGGGTGACTCTCAAGATGGGAGACATCACCAAAGTTCCTCACCTGGAAGGAACAGGAATAGTCGCTCGAGTTCTCCCAAAGATGTCGGAGGAGGCAAACATTTCCGTAGAGACTGCAGGCCTTACCAACCGAACACAAAGAACACATGGCGAAGGCCGAATAATCGAAGCTCACCCAAGCACCCTCTCAATTGTTTCATATGTGGGGGACCACATTTCTTGAATGGAATGCTTTATTCATGTTGTGTGATCATGAATAGGATGCCCTACTCATGCTATGTGATCTTGAATATGATACTCTATTCATGTTGTGTGATCTTGAATATAATGCCTCATACTTGCTGTGTGATCTGGTATAAGATGCCACATACTTGTTGTGTAATATGACTTGAGATACCCTTTTCTTGCTGTGTAATCTGGCATTGGAAGATGCGGTACACGTAGTGTAATTGATGGAACTTGCTAATTATGTTGAGACTACTCCACATGGCTATAACTCAGCAAAACAGTATGATAAATGCTTGTGTCGAGGGAGGATAGGAAGATGATGTAACTTGTACGATGACCCTACGAGTCGACGATGTAATATGCTAGGGGCATCCGCCACGATGGAGCCTATAGTAAAAAGAAAGGAGATGGTTTTTCTTATGTTGTACAAGATACCGAGAAGGACCTAGGTTGGTAAAGTGACTACACGAACAAGAGCAGTTTTCACTCTGTTTGTCAAGCTTCGCGAGCGAGTCTCGCGTAGACAAGAAAGAAGGCAATACCGTAGAATTTTAAGGACAAAATTATAAAAGGGAGGGACTGGTCGTGAGGTCCTGATTGCATACTGCTAAAACAATAAAGGCCCAACAATAAGGAATAGGCATGAGACCTTGACTCGAAGAAAGGAGATTTTGGTGAAGAGAAGAAGTATAGGACACCCCATGGGAAAGTATGAAAAAGGGAAGCAACGCGAGAACAATTGCTTAAGTCTAAGTTCCATCGCAAGAAGGCAACCGATGCGATGAGAATAAGCCGGAGAGGAGAAACGTTTATTGAACACCAAATGCTAGGCATTTAGCATAGTAATACGGAAAATAAGTGTCTATGCCTAAGATAGGAGGCGAGGAAGTATCTTATCAAGATGACTTGACCACTTGTTGAAAGGAAATAAATGTTTGCTGCTTCCTGAGAAGGTATGAGGGTTAGGCAATTTAAAAGTTTGGCTTCCGAAAGAGATAAGTAGTGCATCTTGAGGGAAAGTCCAATCGCCGTTGATAGATAGCCTAAGTGTTGAGTTTGGGTTGGTTGCATGGTGTGATGAGTCGGTAAGAAGGCACATGTAAAGTGTTGAAAGGACCCTTGGATGAAGGAGGTCATTATATAAAGGAACTAATGGCCAAAGAGGAAGAAGGGAGTTTTGAAAATTATTAGACCTTCTGATGAAAGTGACAAGAAAAGATCGAAGAGTTGAACGCAGATGAGGAAACTGTTAGGTGAGAAGAGGAATCTAATGACAGAAAAGAAAGAGATCGAGGCTATCATATACGAGTGAGTGAGAAACAAGATTCGAACGTGACTTCTAAAACTTTCCTTTCATTTTTAAATCTTTCTTTGCTTGTATATAAGTTACAAACAAATGTTTGTGGGTGATTCTTCTTAATTCAAGTGAGTATCTATGTAACTATTATAGTCTTTGAGTGTTTATCGTAAGTAGAATATCTGTGAATCTCTGCCATGGGAGGAATCGATTACGAATGCCATCCATAAATAGTTAGTATCTACGAATCTTTTGTCAATAAAAGAAGTATTTATGGATGTCTTCCATAATCAGTTAGCAACGTGTTGTGAACGTGATACATGAGAAGTATGTTTTGTTAATAGAAATATTCTAATGTTGTTTTTTATTGTATGATTCTGGTGACTACTGAAATACTATGTAAGAAAAGTAAGTGTTCTAACCATTCTGTGTACTGTTTATAGTGGTGAAAATTCCAGGTAACTCGTGTGGCGCTGGTTGAATTCGAATTCCAGGTTCAACTGAGGGGATAAATCCAGGTCTAGGTAGCTACAATGAAACGCTGGTTTAATGGAAAAGGATGAATGTGACGAGACACTAGTAGGAATCCTAGATAACTTGCATGACTTTGGTTGAGTGTGAATTCTTGGTCTAGGCAAGGGGAGAACCCCAGGCCTCAACAACAAGTTGGAAGTGTGATGGTTCCATGGACGTGAATTAATTGTTGTTACGGGAATTGTTGTCCCAGTTGTTGATGGGAATGTGTGATGGCTTAAAACACAGGGAAAGAAATTATGCCTATGGCAACGATCACTATGATTGATGTAGACAAGTGACGACTCGAATGCGTTTGAGTTATTGGTGCCTGTGATGGTGGTGGTTGAGGTTTTGAATGTGCGAAATTTCATTTGCACTTGTGGTAATGGTTGTTGCAGTTGTTGCGATGATAATTAA

mRNA sequence

ATGTCAAATTGGTCTTCAAATTTTGCGAGGTTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTTTTATGTTTTGTCGAAGGGCTGAAACTGTGGGCAAAGACCAAGTTGTATGAAGAAAAGGTTCAACACTTCACGTCAACGTATTCAGTAGCCGAATGGTTGTTCGATCTGATGGGTGACTCTCAAGATGGGAGACATCACCAAAGTTCCTCACCTGGAAGGAACAGGAATAGTCGCTCGAGTTCTCCCAAAGATGTCGGAGGAGGCAAACATTTCCGTAGAGACTGCAGGCCTTACCAACCGAACACAAAGAACACATGGCGAAGGCCGAATAATCGAAGCTCACCCAAGCACCCTCTCAATTGTTTCATATGTGGGGGACCACATTTCTTGAATGGAATGCTTTATTCATGTTGTGTGATCATGAATAGGATGCCCTACTCATGCTATGTAACTCGTGTGGCGCTGGTTGAATTCGAATTCCAGACAAGTGACGACTCGAATGCGTTTGAGTTATTGGTGCCTGTGATGGTGGTGGTTGAGGTTTTGAATGTGCGAAATTTCATTTGCACTTGTGGTAATGGTTGTTGCAGTTGTTGCGATGATAATTAA

Coding sequence (CDS)

ATGTCAAATTGGTCTTCAAATTTTGCGAGGTTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTTTTATGTTTTGTCGAAGGGCTGAAACTGTGGGCAAAGACCAAGTTGTATGAAGAAAAGGTTCAACACTTCACGTCAACGTATTCAGTAGCCGAATGGTTGTTCGATCTGATGGGTGACTCTCAAGATGGGAGACATCACCAAAGTTCCTCACCTGGAAGGAACAGGAATAGTCGCTCGAGTTCTCCCAAAGATGTCGGAGGAGGCAAACATTTCCGTAGAGACTGCAGGCCTTACCAACCGAACACAAAGAACACATGGCGAAGGCCGAATAATCGAAGCTCACCCAAGCACCCTCTCAATTGTTTCATATGTGGGGGACCACATTTCTTGAATGGAATGCTTTATTCATGTTGTGTGATCATGAATAGGATGCCCTACTCATGCTATGTAACTCGTGTGGCGCTGGTTGAATTCGAATTCCAGACAAGTGACGACTCGAATGCGTTTGAGTTATTGGTGCCTGTGATGGTGGTGGTTGAGGTTTTGAATGTGCGAAATTTCATTTGCACTTGTGGTAATGGTTGTTGCAGTTGTTGCGATGATAATTAA

Protein sequence

MSNWSSNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMGDSQDGRHHQSSSPGRNRNSRSSSPKDVGGGKHFRRDCRPYQPNTKNTWRRPNNRSSPKHPLNCFICGGPHFLNGMLYSCCVIMNRMPYSCYVTRVALVEFEFQTSDDSNAFELLVPVMVVVEVLNVRNFICTCGNGCCSCCDDN
BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_011658421.1 (PREDICTED: uncharacterized protein LOC105435997 [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24
Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 0

Query: 18  MSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMGDSQDGRHHQSSSPGR 77
           M+EKDK+  FVEGLK WA+TKLYE+KVQ   S Y+  E LFDL  D Q+ R  QSSSPGR
Sbjct: 1   MTEKDKIFSFVEGLKPWARTKLYEQKVQDLVSAYATTEHLFDLSSDVQEKRRQQSSSPGR 60

Query: 78  NRNSRSSSPKDVGGGKHFRRDCRPYQPNTKNTWRRPNNRSSPKHPLNCFICGGPH 133
           +RN+R + P+ V G +   RD +P Q NT N  +RPNN+ +    ++C+IC GPH
Sbjct: 61  DRNNRPNYPEVVSGNRSPGRDRKPSQSNTGNNGQRPNNQRTSHASISCYICNGPH 115

BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022143491.1 (uncharacterized protein LOC111013368 [Momordica charantia])

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 3   NWSSNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMG 62
           ++   FA+LMLDIRD+SEKDK+  FVEGLK WAK+KLY++ VQ   S Y+ A+ LFDL  
Sbjct: 48  DYVKQFAKLMLDIRDISEKDKIFYFVEGLKPWAKSKLYDQGVQDLGSAYAAAKRLFDLGN 107

Query: 63  D-SQDGRHHQSSSPGRNRNSRSSSPKDVGGGKHFRRDCRPYQPNTKN 109
           + SQD R +Q SS   N+ +R+SSPK  GG  +   D RPYQ    N
Sbjct: 108 EQSQDYRRNQPSSSSGNKTTRTSSPKSXGGDXNGGTDRRPYQKGGTN 154

BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia])

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 0

Query: 3   NWSSNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMG 62
           ++   F+ +MLDIRDMSEKDKV  F+EGLKLWA+TKLYE++VQ   +  + AE L D   
Sbjct: 266 DYVKQFSAVMLDIRDMSEKDKVFVFIEGLKLWARTKLYEQRVQDLATAMASAERLLDYSS 325

Query: 63  DSQDGRHHQSSSPGRNRNSRSSSPKDVGGGKHFRRDCRPYQPN---TKNTWRRPNNRSSP 122
           +    + + ++  G N+  +  +PK +GG      D RP  PN   ++  + +  N   P
Sbjct: 326 EPSHPKKNATNPTGGNKTFKPFTPK-IGGA-----DKRPLGPNPGPSRGPYPQSQNAQRP 385

Query: 123 KHPLNCFICGGPH 133
           K   +CF+C GPH
Sbjct: 386 K---SCFLCRGPH 389

BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 4.6e-14
Identity = 62/149 (41.61%), Postives = 77/149 (51.68%), Query Frame = 0

Query: 3   NWSSNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMG 62
           ++   F+ LMLDIRDMSEKDKV  FVEGLK WA+ KLYE+KVQ   + Y+ AE LF+L  
Sbjct: 226 DYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYEQKVQDIPTAYATAEQLFNLSS 285

Query: 63  D-SQDGRHHQSSSPGRNRNSRS---------SSPKDVGGGKHFRRDCRPYQPNTKNTWRR 122
           D SQ+ R  Q+SS   +R +RS                             PN  N    
Sbjct: 286 DTSQEQRKTQASSSSGHRPARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNPPNN--- 345

Query: 123 PNNRSSPKHPLNCFICGGPHFLNGMLYSC 142
            NNR+ P    +CFIC GPH     +Y C
Sbjct: 346 -NNRTGP----SCFICKGPH----RVYEC 362

BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-12
Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 0

Query: 3   NWSSNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMG 62
           ++   F+ +M+DIRDMSEKDKV  F++GLKLWA+TKLYE++VQ   +  + AE L D   
Sbjct: 266 DYVKQFSAVMMDIRDMSEKDKVFVFIZGLKLWARTKLYEQRVQDLATAMAAAERLLDYNS 325

Query: 63  DSQDGRHHQSSSPGRNRNSRSSSPKDVGGGKHFRRDCRPYQPNTKNTWRRPNNRSSPKHP 122
           +    + + ++  G N+  +  +PK  G  K      RP  PN   +        + +  
Sbjct: 326 EPSHPKKNATNPTGGNKTFKPFTPKSGGADK------RPQGPNPGPSRGPYPQSQNAQRL 385

Query: 123 LNCFICGGPH 133
           ++ F+C GPH
Sbjct: 386 MSYFLCKGPH 389

BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A1R3HZB8|A0A1R3HZB8_COCAP (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16075 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 53/145 (36.55%), Postives = 74/145 (51.03%), Query Frame = 0

Query: 3   NWSSNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMG 62
           ++   F+ LMLDIRDMS+KDK+  F+EGLK WA+T+L  +KVQ      + AE L D   
Sbjct: 131 DYVKTFSTLMLDIRDMSKKDKMFYFLEGLKPWARTELVRQKVQDLAMAMATAERLNDYNE 190

Query: 63  DSQDGRHHQSSSPG---RNRNSRSSSPKDVGGGKHFRRDCRPYQPNTKNTWRRPNNRSSP 122
           +S   +   SS+ G    N    +   K   GG   R++ R     T  T   P  ++  
Sbjct: 191 NSTKRKSTPSSNGGCSSLNGRRPAKMGKSSSGGADNRQNSRDL---TTTTSSAPTFKA-- 250

Query: 123 KHPLNCFICGGPHFL-----NGMLY 140
           K PL CF+C  PH L      G++Y
Sbjct: 251 KQPLACFLCNRPHRLKKEPSRGLMY 270

BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A2P6QT29|A0A2P6QT29_ROSCH (Putative nucleotidyltransferase, Ribonuclease H OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0401341 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08
Identity = 54/147 (36.73%), Postives = 74/147 (50.34%), Query Frame = 0

Query: 6   SNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMGDSQ 65
           + F+ LMLDI DMSEKD++  F+EGL+ WA+T+L  ++VQ   S  + AE L D   +  
Sbjct: 251 NKFSVLMLDIPDMSEKDRLFYFLEGLRPWARTELQRQRVQDLASAQAAAERLTDYTFEEN 310

Query: 66  DGRHHQS-SSPGRNRNSRSSSPKDVGGGKHF------------RRDCRPYQP--NTKNTW 125
             +  Q  S+   NRN R    +  G    F             RD    +P  +T    
Sbjct: 311 SSKKTQPLSNANVNRNVRPGPSRSGGAESKFSNPGGGDRRTVNARDTATSKPVASTGVFT 370

Query: 126 RRPNNRS--SPKHPLNCFICGGPHFLN 136
            RP N S  +PK PL CF+C GPH +N
Sbjct: 371 PRPFNPSGYAPK-PLACFLCRGPHRVN 396

BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A1U8L4G5|A0A1U8L4G5_GOSHI (uncharacterized protein LOC107922645 OS=Gossypium hirsutum OX=3635 GN=LOC107922645 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-08
Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 0

Query: 8   FARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMGDSQDG 67
           F+ LML I D++EK+    F +GLK+WAK +L    +   T   + AE  +D+ G   D 
Sbjct: 221 FSELMLQISDLNEKEAFYWFEDGLKMWAKQELRRLDITELTEAMAKAENFYDVGGRKFD- 280

Query: 68  RHHQSSSPGRNRNSRSSSPKDVGGGKHFRRDCRPY--QPNTKNTWRRPNNRSSPKHPLNC 127
            ++ SS P        S PKD GGG   +R+      +P+  N W R       K P+ C
Sbjct: 281 -NNDSSKP-------KSRPKDNGGGNKDQREKNDEGPKPSQGNPWDR-------KGPMKC 331

Query: 128 FICGGPH 133
           F+C GPH
Sbjct: 341 FLCQGPH 331

BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A2P6RWL1|A0A2P6RWL1_ROSCH (Putative retrotransposon gag domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0137481 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 51/146 (34.93%), Postives = 67/146 (45.89%), Query Frame = 0

Query: 6   SNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMGDSQ 65
           + F+ LMLDI DMSEKD++  F+EGLK WA+T+L  ++VQ   S  +VAE L D   +  
Sbjct: 205 NKFSMLMLDISDMSEKDQLFYFLEGLKPWARTELQRQRVQDLASAQAVAERLTDYTFEEN 264

Query: 66  DGRHHQS-SSPGRNRNSRSSSPKDVGGGKHF-------RRDCRPYQPNTKN--------T 125
             +  Q  S+   NRN R    +  G    F       RR        T          T
Sbjct: 265 SSKKTQPFSNANINRNVRPGPSRSGGAESKFSNSGGGDRRTVNARDTATSKLVASTGVFT 324

Query: 126 WRRPNNRSSPKHPLNCFICGGPHFLN 136
            R  N       PL C +C GPH +N
Sbjct: 325 PRPFNPLGYAPKPLACLLCRGPHKVN 350

BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A1U8KX05|A0A1U8KX05_GOSHI (uncharacterized protein LOC107921643 OS=Gossypium hirsutum OX=3635 GN=LOC107921643 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 47/132 (35.61%), Postives = 61/132 (46.21%), Query Frame = 0

Query: 8   FARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMGDSQDG 67
           F+ LML I DM EK+    F++GLK WAK +L    VQ  T   SVAE L +  G   + 
Sbjct: 155 FSELMLQISDMGEKEAFFSFMDGLKPWAKQELQRRGVQELTKAMSVAESLAEFGGKKDNA 214

Query: 68  RHHQSSSPGRNRNSRSSSPKDVGGGKHFRRDCRPYQ-PNTKNTWRRPNNRSSPKHPLNCF 127
               SS P  N+   S   K+           RP +  N K  W   + R S   P++CF
Sbjct: 215 ---NSSKPRFNQKGNSGGDKE-----------RPIRNSNGKKPW---DKRKS--GPISCF 267

Query: 128 ICGGPHFLNGML 139
            C GPH +   L
Sbjct: 275 HCDGPHMIKDCL 267

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011658421.11.3e-2453.04PREDICTED: uncharacterized protein LOC105435997 [Cucumis sativus][more]
XP_022143491.11.5e-1752.34uncharacterized protein LOC111013368 [Momordica charantia][more]
XP_022154605.13.2e-1539.85uncharacterized protein LOC111021829 [Momordica charantia][more]
XP_022155185.14.6e-1441.61uncharacterized protein LOC111022320 [Momordica charantia][more]
XP_022150099.11.1e-1235.38uncharacterized protein LOC111018360 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1R3HZB8|A0A1R3HZB8_COCAP1.7e-0936.55Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16075 PE=4 SV... [more]
tr|A0A2P6QT29|A0A2P6QT29_ROSCH1.5e-0836.73Putative nucleotidyltransferase, Ribonuclease H OS=Rosa chinensis OX=74649 GN=Rc... [more]
tr|A0A1U8L4G5|A0A1U8L4G5_GOSHI2.5e-0835.43uncharacterized protein LOC107922645 OS=Gossypium hirsutum OX=3635 GN=LOC1079226... [more]
tr|A0A2P6RWL1|A0A2P6RWL1_ROSCH1.3e-0734.93Putative retrotransposon gag domain-containing protein OS=Rosa chinensis OX=7464... [more]
tr|A0A1U8KX05|A0A1U8KX05_GOSHI1.1e-0635.61uncharacterized protein LOC107921643 OS=Gossypium hirsutum OX=3635 GN=LOC1079216... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029139.2.1MELO3C029139.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..118

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None