MELO3C029139.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAATTGGTCTTCAAATGTAATTTTTTTTAATTTCCTCCCTTTCCCTTCCCTTTTGAGAGTGTGATCAATTATAATGATGTAGTTTTTCATATTTATTTTTGTTGTAATTTCGTTAATTAATTTTAAGGTGACTTTAATTTTGTTAGAGTTAGGCCTAGGCCAATTGGGTTTACGGTGCTTTTATTGTTAGTTCAAATTTAGGTCAATTGAATTTATTGTTGCTTAGGTCAATTAAATTTATTGTTGCATCAAATTTAATAGTTTGCGAGGTTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTTTTATGTTTTGTCGAAGGGCTGAAACTGTGGGCAAAGACCAAGTTGTATGAAGAAAAGGTTCAACACTTCACGTCAACGTATTCAGTAGCCGAATGGTTGTTCGATCTGATGGGTGACTCTCAAGATGGGAGACATCACCAAAGTTCCTCACCTGGAAGGAACAGGAATAGTCGCTCGAGTTCTCCCAAAGATGTCGGAGGAGGCAAACATTTCCGTAGAGACTGCAGGCCTTACCAACCGAACACAAAGAACACATGGCGAAGGCCGAATAATCGAAGCTCACCCAAGCACCCTCTCAATTGTTTCATATGTGGGGGACCACATTTCTTGAATGGAATGCTTTATTCATGTTGTGTGATCATGAATAGGATGCCCTACTCATGCTATGTGATCTTGAATATGATACTCTATTCATGTTGTGTGATCTTGAATATAATGCCTCATACTTGCTGTGTGATCTGGTATAAGATGCCACATACTTGTTGTGTAATATGACTTGAGATACCCTTTTCTTGCTGTGTAATCTGGCATTGGAAGATGCGGTACACGTAGTGTAATTGATGGAACTTGCTAATTATGTTGAGACTACTCCACATGGCTATAACTCAGCAAAACAGTATGATAAATGCTTGTGTCGAGGGAGGATAGGAAGATGATGTAACTTGTACGATGACCCTACGAGTCGACGATGTAATATGCTAGGGGCATCCGCCACGATGGAGCCTATAGTAAAAAGAAAGGAGATGGTTTTTCTTATGTTGTACAAGATACCGAGAAGGACCTAGGTTGGTAAAGTGACTACACGAACAAGAGCAGTTTTCACTCTGTTTGTCAAGCTTCGCGAGCGAGTCTCGCGTAGACAAGAAAGAAGGCAATACCGTAGAATTTTAAGGACAAAATTATAAAAGGGAGGGACTGGTCGTGAGGTCCTGATTGCATACTGCTAAAACAATAAAGGCCCAACAATAAGGAATAGGCATGAGACCTTGACTCGAAGAAAGGAGATTTTGGTGAAGAGAAGAAGTATAGGACACCCCATGGGAAAGTATGAAAAAGGGAAGCAACGCGAGAACAATTGCTTAAGTCTAAGTTCCATCGCAAGAAGGCAACCGATGCGATGAGAATAAGCCGGAGAGGAGAAACGTTTATTGAACACCAAATGCTAGGCATTTAGCATAGTAATACGGAAAATAAGTGTCTATGCCTAAGATAGGAGGCGAGGAAGTATCTTATCAAGATGACTTGACCACTTGTTGAAAGGAAATAAATGTTTGCTGCTTCCTGAGAAGGTATGAGGGTTAGGCAATTTAAAAGTTTGGCTTCCGAAAGAGATAAGTAGTGCATCTTGAGGGAAAGTCCAATCGCCGTTGATAGATAGCCTAAGTGTTGAGTTTGGGTTGGTTGCATGGTGTGATGAGTCGGTAAGAAGGCACATGTAAAGTGTTGAAAGGACCCTTGGATGAAGGAGGTCATTATATAAAGGAACTAATGGCCAAAGAGGAAGAAGGGAGTTTTGAAAATTATTAGACCTTCTGATGAAAGTGACAAGAAAAGATCGAAGAGTTGAACGCAGATGAGGAAACTGTTAGGTGAGAAGAGGAATCTAATGACAGAAAAGAAAGAGATCGAGGCTATCATATACGAGTGAGTGAGAAACAAGATTCGAACGTGACTTCTAAAACTTTCCTTTCATTTTTAAATCTTTCTTTGCTTGTATATAAGTTACAAACAAATGTTTGTGGGTGATTCTTCTTAATTCAAGTGAGTATCTATGTAACTATTATAGTCTTTGAGTGTTTATCGTAAGTAGAATATCTGTGAATCTCTGCCATGGGAGGAATCGATTACGAATGCCATCCATAAATAGTTAGTATCTACGAATCTTTTGTCAATAAAAGAAGTATTTATGGATGTCTTCCATAATCAGTTAGCAACGTGTTGTGAACGTGATACATGAGAAGTATGTTTTGTTAATAGAAATATTCTAATGTTGTTTTTTATTGTATGATTCTGGTGACTACTGAAATACTATGTAAGAAAAGTAAGTGTTCTAACCATTCTGTGTACTGTTTATAGTGGTGAAAATTCCAGGTAACTCGTGTGGCGCTGGTTGAATTCGAATTCCAGGTTCAACTGAGGGGATAAATCCAGGTCTAGGTAGCTACAATGAAACGCTGGTTTAATGGAAAAGGATGAATGTGACGAGACACTAGTAGGAATCCTAGATAACTTGCATGACTTTGGTTGAGTGTGAATTCTTGGTCTAGGCAAGGGGAGAACCCCAGGCCTCAACAACAAGTTGGAAGTGTGATGGTTCCATGGACGTGAATTAATTGTTGTTACGGGAATTGTTGTCCCAGTTGTTGATGGGAATGTGTGATGGCTTAAAACACAGGGAAAGAAATTATGCCTATGGCAACGATCACTATGATTGATGTAGACAAGTGACGACTCGAATGCGTTTGAGTTATTGGTGCCTGTGATGGTGGTGGTTGAGGTTTTGAATGTGCGAAATTTCATTTGCACTTGTGGTAATGGTTGTTGCAGTTGTTGCGATGATAATTAA ATGTCAAATTGGTCTTCAAATTTTGCGAGGTTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTTTTATGTTTTGTCGAAGGGCTGAAACTGTGGGCAAAGACCAAGTTGTATGAAGAAAAGGTTCAACACTTCACGTCAACGTATTCAGTAGCCGAATGGTTGTTCGATCTGATGGGTGACTCTCAAGATGGGAGACATCACCAAAGTTCCTCACCTGGAAGGAACAGGAATAGTCGCTCGAGTTCTCCCAAAGATGTCGGAGGAGGCAAACATTTCCGTAGAGACTGCAGGCCTTACCAACCGAACACAAAGAACACATGGCGAAGGCCGAATAATCGAAGCTCACCCAAGCACCCTCTCAATTGTTTCATATGTGGGGGACCACATTTCTTGAATGGAATGCTTTATTCATGTTGTGTGATCATGAATAGGATGCCCTACTCATGCTATGTAACTCGTGTGGCGCTGGTTGAATTCGAATTCCAGACAAGTGACGACTCGAATGCGTTTGAGTTATTGGTGCCTGTGATGGTGGTGGTTGAGGTTTTGAATGTGCGAAATTTCATTTGCACTTGTGGTAATGGTTGTTGCAGTTGTTGCGATGATAATTAA ATGTCAAATTGGTCTTCAAATTTTGCGAGGTTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTTTTATGTTTTGTCGAAGGGCTGAAACTGTGGGCAAAGACCAAGTTGTATGAAGAAAAGGTTCAACACTTCACGTCAACGTATTCAGTAGCCGAATGGTTGTTCGATCTGATGGGTGACTCTCAAGATGGGAGACATCACCAAAGTTCCTCACCTGGAAGGAACAGGAATAGTCGCTCGAGTTCTCCCAAAGATGTCGGAGGAGGCAAACATTTCCGTAGAGACTGCAGGCCTTACCAACCGAACACAAAGAACACATGGCGAAGGCCGAATAATCGAAGCTCACCCAAGCACCCTCTCAATTGTTTCATATGTGGGGGACCACATTTCTTGAATGGAATGCTTTATTCATGTTGTGTGATCATGAATAGGATGCCCTACTCATGCTATGTAACTCGTGTGGCGCTGGTTGAATTCGAATTCCAGACAAGTGACGACTCGAATGCGTTTGAGTTATTGGTGCCTGTGATGGTGGTGGTTGAGGTTTTGAATGTGCGAAATTTCATTTGCACTTGTGGTAATGGTTGTTGCAGTTGTTGCGATGATAATTAA MSNWSSNFARLMLDIRDMSEKDKVLCFVEGLKLWAKTKLYEEKVQHFTSTYSVAEWLFDLMGDSQDGRHHQSSSPGRNRNSRSSSPKDVGGGKHFRRDCRPYQPNTKNTWRRPNNRSSPKHPLNCFICGGPHFLNGMLYSCCVIMNRMPYSCYVTRVALVEFEFQTSDDSNAFELLVPVMVVVEVLNVRNFICTCGNGCCSCCDDN
BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_011658421.1 (PREDICTED: uncharacterized protein LOC105435997 [Cucumis sativus]) HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24 Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022143491.1 (uncharacterized protein LOC111013368 [Momordica charantia]) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17 Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia]) HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15 Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 0
BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia]) HSP 1 Score: 87.8 bits (216), Expect = 4.6e-14 Identity = 62/149 (41.61%), Postives = 77/149 (51.68%), Query Frame = 0
BLAST of MELO3C029139.2 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia]) HSP 1 Score: 83.2 bits (204), Expect = 1.1e-12 Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 0
BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A1R3HZB8|A0A1R3HZB8_COCAP (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16075 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09 Identity = 53/145 (36.55%), Postives = 74/145 (51.03%), Query Frame = 0
BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A2P6QT29|A0A2P6QT29_ROSCH (Putative nucleotidyltransferase, Ribonuclease H OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0401341 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08 Identity = 54/147 (36.73%), Postives = 74/147 (50.34%), Query Frame = 0
BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A1U8L4G5|A0A1U8L4G5_GOSHI (uncharacterized protein LOC107922645 OS=Gossypium hirsutum OX=3635 GN=LOC107922645 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.5e-08 Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 0
BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A2P6RWL1|A0A2P6RWL1_ROSCH (Putative retrotransposon gag domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0137481 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07 Identity = 51/146 (34.93%), Postives = 67/146 (45.89%), Query Frame = 0
BLAST of MELO3C029139.2 vs. TrEMBL
Match: tr|A0A1U8KX05|A0A1U8KX05_GOSHI (uncharacterized protein LOC107921643 OS=Gossypium hirsutum OX=3635 GN=LOC107921643 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06 Identity = 47/132 (35.61%), Postives = 61/132 (46.21%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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