MELO3C028903.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C028903.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionHomogentisate phytyltransferase 2
Locationchr01 : 30430114 .. 30430997 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGTGTTGGCTATCCTGCAGTTATGGTAACCTCTGTAGTTTGGAGGGGTTTGTAGGATGCAAAGATTTTGAAGTATTTTATTGTTAATAATTAGGTTGTGTTGGCTATCCTGCAATTATGGTAGCCTCTGTAGTTTGGATGGGTTTGTAGGATGCCAAGATTTTGAAATATTTTGTTGTTAATAATTAGGTTGTGTTGGTTATCCTGCAGTTATGGTAGCCTCTATAGTTTGAAGTTAGTTATTGAAAAATAGTAAAAATTCAGGGGAGTAAGTTATGGATGTGAGAGAGTGAGAGAGATATGTTTCTAATCAAACCTATTTACGTTTTAGGGACTTAAACGATGGATAAGGGTTGGATGAAACTTAGAAATAAGTTCTCCCTTGAGTGTAGACATGGAGTGACCTAATTTTTAGAATTTGCCAAGTTTCACGTTGATGCTTATGGACGATTAAGGTGTCCATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTTGAACGATATCTACTGACTATTGAAATATCCCCCTACTACACATAATGGGTGTATCATGGAGAGTCATTAAGCTCTAAAGGTACAGAAAACTTTGAGTAAGGAACTAGTAGTAATCATTTTGATGAAGGAACTAGTAATAGGCAATTTAATGAAGAAGGTGATAGCTTTAGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAAAGGAAATAGAGGAATTTCGTTTGGAAGATGAAATGCCGATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAATAATaTATTTCAGAACTTATTGAATCAAACACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTGA

mRNA sequence

GTTGTGTTGGCTATCCTGCAGTTATGGGACTTAAACGATGGATAAGGGTTGGATGAAACTTAGAAATAAGTTCTCCCTTGAGTGTAGACATGGAGTGACCTAATTTTTAGAATTTGCCAAGTTTCACGTTGATGCTTATGGACGATTAAGGTGTCCATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTTGAACGATATCTACTGACTATTGAAATATCCCCCTACTACACATAATGGGTGTATCATGGAGAGTCATTAAGCTCTAAAGGTACAGAAAACTTTGAGTAAGGAACTAGTAGTAATCATTTTGATGAAGGAACTAGTAATAGGCAATTTAATGAAGAAGGTGATAGCTTTAGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAAAGGAAATAGAGGAATTTCGTTTGGAAGATGAAATGCCGATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAATAATaTATTTCAGAACTTATTGAATCAAACACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGCTAAATGATTTACAAGCCCCTATTGAACATGAAAAGGAAATAGAGGAATTTCGTTTGGAAGATGAAATGCCGATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAATAATaTATTTCAGAACTTATTGAATCAAACACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTG

Protein sequence

MLNDLQAPIEHEKEIEEFRLEDEMPMNVGVDIDEDRTNNIFQNLLNQTRNELYPGCSEFSSLNFLVKL
Homology
[Close]
BLAST of MELO3C028903.2 vs. NCBI nr
Match: XP_008455800.1 (PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 1   MLNDLQ-APIEHEKEIEE-FRLEDEMPMNVGVDIDEDRTNNIFQNLLNQTRNELYPGCSE 60
           +L DLQ + I  E+  ++    +DE+P     D+DE  T+N+F+ L+N+ RN LYPGC++
Sbjct: 93  LLTDLQGSMIAREENFDDGDGFDDEVP----EDVDEINTSNVFEELMNEARNPLYPGCTK 152

Query: 61  FSSLNFLVKL 69
           FSSLNFLVKL
Sbjct: 153 FSSLNFLVKL 158

[Close]
BLAST of MELO3C028903.2 vs. TrEMBL
Match: tr|A0A1S3C1V3|A0A1S3C1V3_CUCME (uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.8e-07
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 1   MLNDLQ-APIEHEKEIEE-FRLEDEMPMNVGVDIDEDRTNNIFQNLLNQTRNELYPGCSE 60
           +L DLQ + I  E+  ++    +DE+P     D+DE  T+N+F+ L+N+ RN LYPGC++
Sbjct: 93  LLTDLQGSMIAREENFDDGDGFDDEVP----EDVDEINTSNVFEELMNEARNPLYPGCTK 152

Query: 61  FSSLNFLVKL 69
           FSSLNFLVKL
Sbjct: 153 FSSLNFLVKL 158

The following BLAST results are available for this feature:
BLAST of MELO3C028903.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455800.11.2e-0648.57PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo][more]
BLAST of MELO3C028903.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C028903.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C028903.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C1V3|A0A1S3C1V3_CUCME7.8e-0748.57uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016740 transferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028903.2.1MELO3C028903.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C028903.2Wax gourdmedwgoB246
MELO3C028903.2Cucumber (Gy14) v2cgybmedB456
MELO3C028903.2Cucumber (Gy14) v1cgymedB091
MELO3C028903.2Cucurbita maxima (Rimu)cmamedB380
MELO3C028903.2Cucurbita maxima (Rimu)cmamedB532
MELO3C028903.2Cucurbita maxima (Rimu)cmamedB935
MELO3C028903.2Cucurbita maxima (Rimu)cmamedB923
MELO3C028903.2Cucurbita moschata (Rifu)cmomedB362
MELO3C028903.2Cucurbita moschata (Rifu)cmomedB366
MELO3C028903.2Cucurbita moschata (Rifu)cmomedB520
MELO3C028903.2Cucurbita moschata (Rifu)cmomedB924
MELO3C028903.2Cucurbita moschata (Rifu)cmomedB912
MELO3C028903.2Cucurbita pepo (Zucchini)cpemedB148
MELO3C028903.2Cucurbita pepo (Zucchini)cpemedB151
MELO3C028903.2Cucurbita pepo (Zucchini)cpemedB344
MELO3C028903.2Cucurbita pepo (Zucchini)cpemedB348
MELO3C028903.2Wild cucumber (PI 183967)cpimedB176
MELO3C028903.2Wild cucumber (PI 183967)cpimedB513
MELO3C028903.2Cucumber (Chinese Long) v2cumedB177
MELO3C028903.2Cucumber (Chinese Long) v2cumedB502
MELO3C028903.2Melon (DHL92) v3.6.1medmedB092
MELO3C028903.2Bottle gourd (USVL1VR-Ls)lsimedB195
MELO3C028903.2Bottle gourd (USVL1VR-Ls)lsimedB205
MELO3C028903.2Watermelon (Charleston Gray)medwcgB161
MELO3C028903.2Watermelon (97103) v1medwmB187
MELO3C028903.2Watermelon (97103) v1medwmB223
MELO3C028903.2Watermelon (97103) v1medwmB228
MELO3C028903.2Silver-seed gourdcarmedB0056
MELO3C028903.2Silver-seed gourdcarmedB0057
MELO3C028903.2Silver-seed gourdcarmedB0113
MELO3C028903.2Silver-seed gourdcarmedB0756
MELO3C028903.2Cucumber (Chinese Long) v3cucmedB179
MELO3C028903.2Cucumber (Chinese Long) v3cucmedB526
MELO3C028903.2Watermelon (97103) v2medwmbB199