MELO3C028848.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C028848.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Locationchr01 : 8727114 .. 8733868 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAAAGCAGCGGGGGAACGGTTGGAAACAGTGGAGCTGGAGATGAAAAGGTTGCCGATGATTGAAGAGAACATAGCATTGTTGGCCAAAAATATTGCGGAGATGAACTCGCAAATCGACAAACAAGCACAGCAGCAGCAGGTGATATTGAAGTATATTGAAGGAATCATTAAGGACGATACACCGGGAAGAAAGATAGAAGAAGGATCCACCAGCAAGGTTACCATGGCTGAAGCATCCTCCCCAGCGACTGTTGAAGAACCAAAGTTGGAAGCAAAAACAGCGGAAGAACGAACGCTTGATCGAAGTAAGTTTAAGAAAGTGGAGATGCCAGTTTTCGATGGAACAGACCCCGACTCGTGGCTGTTCAGAGCAGATCGCTACTTCAAGATACATAACTTGTCGGATTCGGAGAAACTCACAGTGGCAGTGATCAGCTTCAATGGGCCAGCGTTGGACTGGTACCGATCACAAGAAGAGCGGAAAGCATTTGCCGAATGGGATGACTTGAAACAGAAAATGTTAGTAAGGTTCCGAGCAACCAGGGAAGGAACGTTGGTGGGCCGATTCTTAACGATCAAACAGGGGTAGACCACCGTCGAGGAATACCGGAACCGTTTCGACAAGCTACTAGCACCGGTGGCTTCCTTGCCCACGGTGGTGTTAGAGGAAACATTTATGAATGGGCTAAACCCGTGGTTGAAGTCGGAAGTGGAAACCCTGGAGCCCAATGGGCTGGCCCAAATGATGAAGTTTTGGCATTAAAGATAGAAAACAGGGAGCTGGTCCGAAAGGAATGTGGGCTGATTAGTGCCTACGACGTTAAATCCGACCATAAAAGTCAACAGACTAAGAACACCGGTTCAACAGCCACGAAGGAGGGATTGACCGGGGGAAGTTGGCCAATGAGAACAATAACTCTGAGAGAGGTAGCCACGGGAGATAACCGTCGGGAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTCTCTCAACTCAGTGGTGGGACTGACCAACCCAGGGACCATGAAGGTAAAAGGAAGGGTGGGAGAAGAAGAGGTGGTAATCCTAATCGACTGTGGGGCTACCCACAACTTCATCGTGGAAAAATTGGTGACCAAACTGGGATTGACGCTGCAGGAGACATCGAACTATGGGGTGATCCTAGGGTCTGGAACGGCAGTTAAGGGGAAGGGAGTGTGCCGAGATGTCGAAGTACAATTGGAAGGCTGGAAGGTGAAGGATAGCTTCCTACCACTGCAGTTGGGAGGGGTTGACATGATCTCAAGTATGCAGTGGGTCCATTCTCTGGGGGTGACGGAAGTCGACTGGAAAAAGCTGATGCTCACCTTCCATCACCAGGGAAGGAAGGTTGTGATAAAAGGGGATCTGAGCCTCACCAAAACACGGGTGAGTTTGAAGAACTTGATGAAATCCTGGGGAGCAGACGATCAGGGATTCCTTGTAGAATGTCGAACCATAGAATGTGGACTGTTAGAAGAACATGAACAAGACAGAGGGCAGGGGAGGGAGGATGAAGAAGCAATAGCGACCCTGTTAAAGCAGTTTGCTAGCATGTTCGAATGGCCCACAGCACTCCCATCACAGCGCAGTATTGATCATCACATCTACCTGAAGAGTGGAACGGACCCCGTGAATGTCAGGCCATACCGATATGCGCACCATCAGAAGGAAGAGATGGAGCGATTGGTAGACGAAATGCTTTCCTCAGGGATCATACGACCGAGCAAAAGCCCTTATTCCAGCCCGGTGCTGTTGGTAAGGAAGAAAGACGGGAGTTGGAGGTTTTGTGTAGACTATCGAGCATCGAATAACGTGACGATCCCAGACAAGTTCCCAATACCGGTGATAGGAGAATTGTTCGACGAATTGAAGGGAGCTAGTGTATTTTCCAAAATAGATCTCAAAGTCGGATACCATCAGATTAGGATGTGCCCCGAGGACATCGAAAAGACCGCGTTCAGAACTCATGAAGGGCACTACGAATTCTTAGTGATGCCGTTCGGATTAACGAATGCTCCATCGACCTTTCAGGCACTGATGACTCAGGTGTTTAAGCCATACTTGAGACGGTTTGTGTTGGTATTCTTCGATGATATTTTGGTCTACAGCCAAGGGATAGACGAGCACATCCAGCACTTAGAGGTGGTCTTAGGACTGCTGAAAGAAAAGGAGTTATATGCGAATTTGGAGAAGTGTAGTTTTGCAAAGCCTCGGATCAGTTATTTGGGGCATTTCATTTCGGAACAGGGCATTGAAGCAGATCCGGAAAAGATAAGAGCGGTTAGTGAATGGCCAACTCCGACCAATGTGAGGGAAGTTCGGGGATTCCTTGTGCTGACCGGCTACTACCGGCGCTTTGTCAAAGACTATGGAGCAATAGCAGCGCCACTCACCCAACTGTTGAAGAAAGGGGCGTACAAGTGGGATGCTGAAACTGAGACTGCTTTTGATAAGTTGAAGAAGGCCATGATGACTCTACCGGTACTTGCCATGCCCGACTTCAATCTGCCCTTCGAAATCGAATCAGATGCTTCAGGATTTGGGGTTGGGGCGGTGTTGACGCCCGTAGCTTATTTCTGTAGAACACTAAGTATGCGAGACAGAGCGCGGCCGGTGTATGAAAGAGAGTTGATTGCCGTAGTCTATGCAGTACAAAGATGGCGGCTGTACTTGCTAGGAAGGAAGTTCACGGTGAAGACAGACCAAAGGTCGCTGAAGTTTCTGTTGGAACAACGTGTTGTGCATTCCTCAGTATCAAAGATGGGTCGCGAAGCTGTTGGGATATTCGTTCGAAGTAACCTACCAGCCAGGACTGGAGAATAAAGCCGCTGACGCCCTGTCCCGAATTTCACCAGCCGTACAGTTGAATCAGATCACAGCCCCCACAATGATAGATGTGGATATCATCAAGGAAGAAACAAGGCAGGATTCCCTTGCGCTGCAAGAAATCATTAGATTGATCGAAGAGCAAGGGATGGAGATACCCCATTACACTCTGCACCAGGGGGTGTTGAAGTTTAAAGGACGGCTGGTGATTCCAAGCAACTCCACTCTGCTACCTACAATATTACACACCTACCATGATTCAGTGTTCGGGGGGCACTCGGGATTTTTAAGAACGTATAAGCGGTTGACTGGGGAGCTCTACTGGAAGGGCATGAAGAAGGACATTATGAGGTATTGTGAAGAGTGCGCGATATGCCAGCGAAATAAGTCTTCAACATTGTCACCGGCAAGGCTACTGATGCCATTGGAAATTTCCGACGCAATATGGAGTGACATCTCCATGGACTTCATTGAAGGGTTGCCAAAATCCAAGGGGTGGGATGTGATACTTGTGGTGGTGGATAGACTGAGTAAATATGGTCATTCTGCTTTTGAAGCATCCTTTCACAGCCAAGACAGTGGCATAAACTTTTGTCAGGGAAGTGATCCGACTTCATGGGTATCCGAGATCGATAGTGTCTGATAGGGACAAGGTTTTCCTAAGTCATTTCTGGAAAGAACTATTCCGTTTAGCAGGCACTAAGCTGAACCGAAGCTCCTCCTATCATCCACAATCAGATGGTCAGACCGAGGTGGTGAACAAGAGTGTTGAGACATATTTGAGGTGTTTTTGTGGGGAAAGACCGCACGAATGGAGCCAGTGGACACATTGGGCAGAATACTGGTACAATACTACCTATCACAGTTCGATTGGCATCACCCCTTTCCAAACTGTCTATGGAGGCCTACCCCCTCCACTGGTGTACTATGGAGACATGGAGACACCAAATTCGACACTCGACCAGCAGTTGAAAGACAGAGATATCGCACTATTGGGGCGTTGAAGGAACACATGAAAATAGCTCAAGAAAGGATGAAGAAATAGGCTGACACCAAGAGAAGGGAAGTTGAATTCCAAGAAGGGGATTTGGTGTTCCTCAAATTACGACCTTACCGGCAGACATCACTTAGAAAGAAAAGGAATGAAAAGCTGTCAGCAAAGTACTTCGGGCCTTATCGGATCTTAGAAAGAATCGGAGAAGTAGCATACAAACTCGAACTTCCTGCGGATGCTGCTATCCACCCCGTGTTCCATGTGTCACAGCTGAAGAAAGCTGTTAGGAGAGGCGAAACGGTGCAACCATTGAATCCATACATGAATGAAAACCATGAATGGATCACGCAGCCCGAAGAAGTCTACAGCTATCGAAAGAATCCAGCAACTAATGATTGGGAAGCATTGATCAGCTGGAAGGGACTGCCGCCACACGAGGCAACATGGGAGAATTGCGCTGACATGAAGTACCAGTTCCCGGAGTTCCACCTTGAGGACAAGGTGGATTTGGAAGAGGAGAGTGATGCTAGGCCCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTTGTTGCTCGTTAAGCTTTCCTTGTGATAGTCCCATATTGTGGGATTAAGTTTGTTCATTGTGTTTTTTTTTTGGGCTGTAATCAGTTTTTGAAAGGAAATATATCAATCGAAAGTTGAAGAGTCTTAACACATGTCTGCTCACAATAATTCTATGCCACAAGGATTTGGGCTCAAGAGCAAAACGCCAAAACCATTTAGCCAACAGGGCTTTGTTGGGTAACCTTAAATTTTCAAACTCTAACACTCCCAATTCACAAGTTTTCCCACAACTTCCCAGCTAACCAGATGAGACCCTTTCCCTTCCTCAACCACTTCCAAGAGGAAGTCTCTCATGAGCTTCTTAATGCTTTTGTGAACCAAAAAAGACGTGCAAAAAAGGAAAAGTAATAAATGGGAATACCATTCAGCAATCAGCACTGATTTGATTAGACTTAACGTCCCAGCTTCAGAAAAGAATTTTTTCTTCCTTGAAGCTAACCTCTTCCTTATTTTATCCATGGGGGGCATCCCAAAAAGAGAGCACTCATATTACCTCCTCCCAAGGGGAGGTCGAGATGGGAAGAGGGAAAAGACCCAACTTTGCAACCAAACAGAGCCACCCATCTAATAAGCTTTTCTTGCTCACGATTTCTTTATGCCAAAAATATGACACTCCTATTAGTTTTAAGCCTGACATCGCCTCAAAGAATCCCAGAATGTAA

mRNA sequence

ATGACGAAAGCAGCGGGGGAACGGTTGGAAACAGTGGAGCTGGAGATGAAAAGGTTGCCGATGATTGAAGAGAACATAGCATTGTTGGCCAAAAATATTGCGGAGATGAACTCGCAAATCGACAAACAAGCACAGCAGCAGCAGGTGATATTGAAGTATATTGAAGGAATCATTAAGGACGATACACCGGGAAGAAAGATAGAAGAAGGATCCACCAGCAAGGTTACCATGGCTGAAGCATCCTCCCCAGCGACTGTTGAAGAACCAAAGTTGGAAGCAAAAACAGCGGAAGAACGAACGCTTGATCGAAGTAAGTTTAAGAAAGTGGAGATGCCAGTTTTCGATGGAACAGACCCCGACTCGTGGCTGTTCAGAGCAGATCGCTACTTCAAGATACATAACTTGTCGGATTCGGAGAAACTCACAGTGGCAGTGATCAGCTTCAATGGGCCAGCGTTGGACTGGTACCGATCACAAGAAGAGCGGAAAGCATTTGCCGAATGGGATGACTTGAAACAGAAAATGTTAGTTCCGAGCAACCAGGGAAGGAACGTTGGTGGGCCGATTCTTAACGATCAAACAGGGGTAGACCACCGTCGAGGAATACCGGAACCGTTTCGACAAGCTACTAGCACCGGTGGCTTCCTTGCCCACGGTGGTGTTAGAGGAAACATTTATGAATGGGCTAAACCCGTGGTTGAAGTCGGAAGTGGAAACCCTGGAGCCCAATGGGCTGGCCCAAATGATGAAGTTTTGGCATTAAAGATAGAAAACAGGGAGCTGGTCCGAAAGGAATGTGGGCTGATTAGTGCCTACGACGTTAAATCCGACCATAAAAGTCAACAGACTAAGAACACCGGTTCAACAGCCACGAAGGAGGGATTGACCGGGGGAAGTTGGCCAATGAGAACAATAACTCTGAGAGAGGATTCCCTTGCGCTGCAAGAAATCATTAGATTGATCGAAGAGCAAGGGATGGAGATACCCCATTACACTCTGCACCAGGGGGTGTTGAAGTTTAAAGGACGGCTGCTAACCTCTTCCTTATTTTATCCATGGGGGGCATCCCAAAAAGAGAGCACTCATATTACCTCCTCCCAAGGGGAGGTCGAGATGGGAAGAGGGAAAAGACCCAACTTTGCAACCAAACAGAGCCACCCATCTAATAAGCTTTTCTTGCTCACGATTTCTTTATGCCAAAAATATGACACTCCTATTAGTTTTAAGCCTGACATCGCCTCAAAGAATCCCAGAATGTAA

Coding sequence (CDS)

ATGACGAAAGCAGCGGGGGAACGGTTGGAAACAGTGGAGCTGGAGATGAAAAGGTTGCCGATGATTGAAGAGAACATAGCATTGTTGGCCAAAAATATTGCGGAGATGAACTCGCAAATCGACAAACAAGCACAGCAGCAGCAGGTGATATTGAAGTATATTGAAGGAATCATTAAGGACGATACACCGGGAAGAAAGATAGAAGAAGGATCCACCAGCAAGGTTACCATGGCTGAAGCATCCTCCCCAGCGACTGTTGAAGAACCAAAGTTGGAAGCAAAAACAGCGGAAGAACGAACGCTTGATCGAAGTAAGTTTAAGAAAGTGGAGATGCCAGTTTTCGATGGAACAGACCCCGACTCGTGGCTGTTCAGAGCAGATCGCTACTTCAAGATACATAACTTGTCGGATTCGGAGAAACTCACAGTGGCAGTGATCAGCTTCAATGGGCCAGCGTTGGACTGGTACCGATCACAAGAAGAGCGGAAAGCATTTGCCGAATGGGATGACTTGAAACAGAAAATGTTAGTTCCGAGCAACCAGGGAAGGAACGTTGGTGGGCCGATTCTTAACGATCAAACAGGGGTAGACCACCGTCGAGGAATACCGGAACCGTTTCGACAAGCTACTAGCACCGGTGGCTTCCTTGCCCACGGTGGTGTTAGAGGAAACATTTATGAATGGGCTAAACCCGTGGTTGAAGTCGGAAGTGGAAACCCTGGAGCCCAATGGGCTGGCCCAAATGATGAAGTTTTGGCATTAAAGATAGAAAACAGGGAGCTGGTCCGAAAGGAATGTGGGCTGATTAGTGCCTACGACGTTAAATCCGACCATAAAAGTCAACAGACTAAGAACACCGGTTCAACAGCCACGAAGGAGGGATTGACCGGGGGAAGTTGGCCAATGAGAACAATAACTCTGAGAGAGGATTCCCTTGCGCTGCAAGAAATCATTAGATTGATCGAAGAGCAAGGGATGGAGATACCCCATTACACTCTGCACCAGGGGGTGTTGAAGTTTAAAGGACGGCTGCTAACCTCTTCCTTATTTTATCCATGGGGGGCATCCCAAAAAGAGAGCACTCATATTACCTCCTCCCAAGGGGAGGTCGAGATGGGAAGAGGGAAAAGACCCAACTTTGCAACCAAACAGAGCCACCCATCTAATAAGCTTTTCTTGCTCACGATTTCTTTATGCCAAAAATATGACACTCCTATTAGTTTTAAGCCTGACATCGCCTCAAAGAATCCCAGAATGTAA

Protein sequence

MTKAAGERLETVELEMKRLPMIEENIALLAKNIAEMNSQIDKQAQQQQVILKYIEGIIKDDTPGRKIEEGSTSKVTMAEASSPATVEEPKLEAKTAEERTLDRSKFKKVEMPVFDGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFAEWDDLKQKMLVPSNQGRNVGGPILNDQTGVDHRRGIPEPFRQATSTGGFLAHGGVRGNIYEWAKPVVEVGSGNPGAQWAGPNDEVLALKIENRELVRKECGLISAYDVKSDHKSQQTKNTGSTATKEGLTGGSWPMRTITLREDSLALQEIIRLIEEQGMEIPHYTLHQGVLKFKGRLLTSSLFYPWGASQKESTHITSSQGEVEMGRGKRPNFATKQSHPSNKLFLLTISLCQKYDTPISFKPDIASKNPRM
Homology
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BLAST of MELO3C028848.2 vs. NCBI nr
Match: XP_016903467.1 (PREDICTED: uncharacterized protein LOC107992206 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 4.5e-32
Identity = 107/308 (34.74%), Postives = 161/308 (52.27%), Query Frame = 0 

Query: 12  VELEMKRLPMIEENIALLAKNIAEMNSQIDKQAQQQQVILKYIEGIIKDDTPGRK----- 71
           ++ E+ ++PMIE  +  L+KN+  M  Q +K   QQQ IL Y+E   K  +  R+     
Sbjct: 20  IKKELMKMPMIESTLIELSKNMETMRLQSEK---QQQAILSYMEANAKGRSTARERMNES 79

Query: 72  -IEEGSTSKVTMAEASSPATVEEPKLEAKT-AEERTLDRSKFKKVEMPVFDGTDPDSWLF 131
            I+    +K    +ASS   + E   E KT ++E T D+SKFK+VE PVF G DP+SWLF
Sbjct: 80  DIQNSPATKSKDGKASSSRDIGETSTERKTDSDENTSDQSKFKQVERPVFTGEDPESWLF 139

Query: 132 RADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFAEWDDLKQKMLV--PSNQG 191
           RA+RYF+IH L++SEK+ V+ I F+GPAL+WYRSQEER+ F  W +LK++++V   S + 
Sbjct: 140 RAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFVSWTNLKERLMVRFQSTRE 199

Query: 192 RNVGGPILNDQ---TGVDHRRGIPEPFRQATSTGGFLAHGGVRGNIYEWAKPVVEVGSGN 251
             V G  L  Q   T  ++R    +     +     +        ++ W +  V +    
Sbjct: 200 GTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFMTGLFPWIRAEVILCRPK 259

Query: 252 PGAQWAGPNDEVLALKIENRELVRKECGLISAYDVK-SDHKSQQTKNTGSTATKEGLTGG 307
             A+       + A  +E+RE++R    L      K S   S  TK+      KE  T  
Sbjct: 260 GLAEMM-----LTAQLVEDREILRNAANLNGYIGGKQSTSLSTGTKHLYYQQNKENKTNT 319

[Close]
BLAST of MELO3C028848.2 vs. NCBI nr
Match: XP_016902037.1 (PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-31
Identity = 112/301 (37.21%), Postives = 161/301 (53.49%), Query Frame = 0 

Query: 7   ERLETVE-------LEMKRLPMIEENIALLAKNIAEMNSQIDKQAQQQQVILKYIEGIIK 66
           ERLE ++        E+ ++P+IE ++  +AKN+  M +Q DK   Q+Q++L  +E I K
Sbjct: 15  ERLEVIDQEIALMKKELGKMPIIELSLNDIAKNMQTMRAQSDK---QEQMLLMIMETIAK 74

Query: 67  D-DTPGRKIEEGS-----TSKVTMAEASSPATV------EEPKLEAKT-AEERTLDRSKF 126
           D  T G + EE +     T+K    EA+S  +        + + E KT  EE   DR+KF
Sbjct: 75  DRTTTGERNEEPNALMSVTNKGKEKEATSSKSAVSGQSNSDDRNEGKTETEEAAADRNKF 134

Query: 127 KKVEMPVFDGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFA 186
           KKVEMPVF G D DSWLFRA+RYF+IH LSDSEK+ V+ ISF+GPAL+ Y+SQEER+ F 
Sbjct: 135 KKVEMPVFAGEDLDSWLFRAERYFQIHKLSDSEKMLVSTISFDGPALNRYQSQEEREKFI 194

Query: 187 EWDDLKQKMLVPSNQGRNVGGPIL------NDQTGVDHRRG-----------IPEPFRQA 246
            W +LK+++LV     R+  G IL        +T VD  R            +P+P  + 
Sbjct: 195 SWSNLKERLLVRFRSSRD--GTILGKFLRVKQETTVDEYRNLFDKLVAPLSDVPDPVVKD 254

Query: 247 TSTGGFLAHGGVRGNIYEWAKPVVEVGSGNPGAQWAGPNDEVLALKIENRELVRKECGLI 271
           T   G          ++ W +  V +      A+        +A  +ENRE++R E  L 
Sbjct: 255 TFMNG----------LFPWIRAEVILCRPKGLAEMM-----EIAQVVENREIIRNEANLN 295

[Close]
BLAST of MELO3C028848.2 vs. NCBI nr
Match: XP_022154744.1 (uncharacterized protein LOC111021922 [Momordica charantia])

HSP 1 Score: 105.1 bits (261), Expect = 5.7e-19
Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 0 

Query: 66  KIEEGSTSKVTMAEASS-------PATVEEPKLEAKT--AEERTLDRSKFKKVEMPVFDG 125
           ++ +G + +   AE  S       P    E + E  T  AE   ++R+KFKKVEMPVF G
Sbjct: 63  EVSQGKSPRPAAAENGSSALKRKLPEENSEQQGETSTGKAEGPGVERNKFKKVEMPVFTG 122

Query: 126 TDPDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFAEWDDLKQKM 176
            DP+SWLFRA+RYF+I++LS+ EK+TV +ISF G A+ WY   E R+ FA+W++LK +M
Sbjct: 123 DDPNSWLFRAERYFEINHLSEEEKMTVTIISFEGAAMKWYCWSENRQPFADWNNLKTRM 181

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BLAST of MELO3C028848.2 vs. NCBI nr
Match: XP_022848903.1 (uncharacterized protein LOC111371244 [Olea europaea var. sylvestris])

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-16
Identity = 52/154 (33.77%), Postives = 86/154 (55.84%), Query Frame = 0 

Query: 35  EMNSQIDKQAQQQQVILKYIEGIIKDDTPGRKIEEGSTSKVTMAEASSPATVEEPKLEAK 94
           E+ + I    ++ +++L   EG   D   G+      +S +      SP+  EEP    K
Sbjct: 31  EIQNDISGLKEKFELLLSKWEGQAHD---GKGKGVAGSSSMAAPTVESPSNYEEPDQPNK 90

Query: 95  TAEERTLDRSKFKKVEMPVFDGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALD 154
             E++     + +++EMPVF G +PD WLF+A+RYF I++ S+ EK+  A + F G AL 
Sbjct: 91  DLEDKGRMDGRSRRLEMPVFHGENPDGWLFKAERYFSINHFSNWEKIEAAAVCFEGEALA 150

Query: 155 WYRSQEERKAFAEWDDLKQKMLV---PSNQGRNV 186
           WY+ ++ R+ F  W+DLK  +L+   PS +G N+
Sbjct: 151 WYQWEDGRQTFQRWEDLKAALLLRFRPSQEGTNL 181

[Close]
BLAST of MELO3C028848.2 vs. NCBI nr
Match: XP_022137369.1 (uncharacterized protein LOC111008840 [Momordica charantia])

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-16
Identity = 55/166 (33.13%), Postives = 93/166 (56.02%), Query Frame = 0 

Query: 11  TVELEMKRLPMIEENIALLAKNIAEMNSQIDKQAQQQQVILKYIEGIIKDDTPGRKIEEG 70
           TV+    R   +E+ I  +   IA ++ + D+Q +Q + +   ++  +     G   +  
Sbjct: 2   TVKELETRCEAVEQEIVSVKLEIALLHQRFDEQQKQIESLHVTLKTFMAQTIGGSPSQSN 61

Query: 71  S-TSKVTMAEASSPATVEEPKLEAKTAEERTLDRSKFKKVEMPVFDGTDPDSWLFRADRY 130
           S  +  T+         + P   A   E +  DR++FKKVEMP+F G + ++W+FRA+RY
Sbjct: 62  SLLTGETLIRKGKEVAEDVP---ANNNEAQGNDRNRFKKVEMPIFGGEELEAWIFRAERY 121

Query: 131 FKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFAEWDDLKQKM 176
           F+I  L+D EK+ VA+ISF+G AL WYR  + R+   +W+DLK ++
Sbjct: 122 FEIQKLTDEEKMIVAIISFDGIALAWYRYTDNREKHQDWNDLKGRL 164

[Close]
BLAST of MELO3C028848.2 vs. TAIR10
Match: AT1G67020.1 (unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-09
Identity = 41/178 (23.03%), Postives = 84/178 (47.19%), Query Frame = 0 

Query: 4   AAGERLETVELEMKRLPMIEENIALL---AKNIAEMNSQIDKQAQQQQVILKYIEGIIK- 63
           A G+  E  E E       E N+ +L    K +     Q +++ +    +L+ +   ++ 
Sbjct: 2   ALGDESEVFESENCHGDETERNMKVLFGGFKRLCADKVQHEEKLESMDSVLRQVVATLER 61

Query: 64  -DDTPGRKIEEGSTSKVTMAEASSPATVEEPKLEAKTAEERTLDRSKFKKVEMPVFDGTD 123
            +   G+++E+G  S  +   + S +  +    E+    +     S  +++EMPVFDG+ 
Sbjct: 62  MEIREGKRVEQGEHSCQSPRHSFSSSMPQRGAGESPILLDNR--SSLIRRIEMPVFDGSG 121

Query: 124 PDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFAEWDDLKQKML 177
              W  + +R+F++    DS+KL +  +S  G AL W+  +     F +W+  +Q++L
Sbjct: 122 VYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLREMSTLEFRDWNSFEQRLL 177

[Close]
BLAST of MELO3C028848.2 vs. TrEMBL
Match: tr|A0A1S4E5H0|A0A1S4E5H0_CUCME (uncharacterized protein LOC107992206 OS=Cucumis melo OX=3656 GN=LOC107992206 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 107/308 (34.74%), Postives = 161/308 (52.27%), Query Frame = 0 

Query: 12  VELEMKRLPMIEENIALLAKNIAEMNSQIDKQAQQQQVILKYIEGIIKDDTPGRK----- 71
           ++ E+ ++PMIE  +  L+KN+  M  Q +K   QQQ IL Y+E   K  +  R+     
Sbjct: 20  IKKELMKMPMIESTLIELSKNMETMRLQSEK---QQQAILSYMEANAKGRSTARERMNES 79

Query: 72  -IEEGSTSKVTMAEASSPATVEEPKLEAKT-AEERTLDRSKFKKVEMPVFDGTDPDSWLF 131
            I+    +K    +ASS   + E   E KT ++E T D+SKFK+VE PVF G DP+SWLF
Sbjct: 80  DIQNSPATKSKDGKASSSRDIGETSTERKTDSDENTSDQSKFKQVERPVFTGEDPESWLF 139

Query: 132 RADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFAEWDDLKQKMLV--PSNQG 191
           RA+RYF+IH L++SEK+ V+ I F+GPAL+WYRSQEER+ F  W +LK++++V   S + 
Sbjct: 140 RAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFVSWTNLKERLMVRFQSTRE 199

Query: 192 RNVGGPILNDQ---TGVDHRRGIPEPFRQATSTGGFLAHGGVRGNIYEWAKPVVEVGSGN 251
             V G  L  Q   T  ++R    +     +     +        ++ W +  V +    
Sbjct: 200 GTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFMTGLFPWIRAEVILCRPK 259

Query: 252 PGAQWAGPNDEVLALKIENRELVRKECGLISAYDVK-SDHKSQQTKNTGSTATKEGLTGG 307
             A+       + A  +E+RE++R    L      K S   S  TK+      KE  T  
Sbjct: 260 GLAEMM-----LTAQLVEDREILRNAANLNGYIGGKQSTSLSTGTKHLYYQQNKENKTNT 319

[Close]
BLAST of MELO3C028848.2 vs. TrEMBL
Match: tr|A0A1S4E1D6|A0A1S4E1D6_CUCME (transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496677 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.6e-32
Identity = 112/301 (37.21%), Postives = 161/301 (53.49%), Query Frame = 0 

Query: 7   ERLETVE-------LEMKRLPMIEENIALLAKNIAEMNSQIDKQAQQQQVILKYIEGIIK 66
           ERLE ++        E+ ++P+IE ++  +AKN+  M +Q DK   Q+Q++L  +E I K
Sbjct: 15  ERLEVIDQEIALMKKELGKMPIIELSLNDIAKNMQTMRAQSDK---QEQMLLMIMETIAK 74

Query: 67  D-DTPGRKIEEGS-----TSKVTMAEASSPATV------EEPKLEAKT-AEERTLDRSKF 126
           D  T G + EE +     T+K    EA+S  +        + + E KT  EE   DR+KF
Sbjct: 75  DRTTTGERNEEPNALMSVTNKGKEKEATSSKSAVSGQSNSDDRNEGKTETEEAAADRNKF 134

Query: 127 KKVEMPVFDGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFA 186
           KKVEMPVF G D DSWLFRA+RYF+IH LSDSEK+ V+ ISF+GPAL+ Y+SQEER+ F 
Sbjct: 135 KKVEMPVFAGEDLDSWLFRAERYFQIHKLSDSEKMLVSTISFDGPALNRYQSQEEREKFI 194

Query: 187 EWDDLKQKMLVPSNQGRNVGGPIL------NDQTGVDHRRG-----------IPEPFRQA 246
            W +LK+++LV     R+  G IL        +T VD  R            +P+P  + 
Sbjct: 195 SWSNLKERLLVRFRSSRD--GTILGKFLRVKQETTVDEYRNLFDKLVAPLSDVPDPVVKD 254

Query: 247 TSTGGFLAHGGVRGNIYEWAKPVVEVGSGNPGAQWAGPNDEVLALKIENRELVRKECGLI 271
           T   G          ++ W +  V +      A+        +A  +ENRE++R E  L 
Sbjct: 255 TFMNG----------LFPWIRAEVILCRPKGLAEMM-----EIAQVVENREIIRNEANLN 295

[Close]
BLAST of MELO3C028848.2 vs. TrEMBL
Match: tr|E5GC35|E5GC35_CUCME (Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-16
Identity = 53/172 (30.81%), Postives = 88/172 (51.16%), Query Frame = 0 

Query: 4   AAGERLETVELEMKRLPMIEENIALLAKNIAEMNSQIDKQAQQQQVILKYIEGIIKDDTP 63
           A+   +E ++ E++R+P++E+ +  +   + EM     +Q                    
Sbjct: 12  ASEAEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDCQRQ------------------PG 71

Query: 64  GRKIEEGSTSKVTMAEASSPATVEEPKLEAKTAEERTLDRSKFKKVEMPVFDGTDPDSWL 123
           G ++   ST K  +         EE +           DR KFKK+EMPVF+G DPD W+
Sbjct: 72  GFELTRVSTGKRKIRTEDLVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWI 131

Query: 124 FRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFAEWDDLKQKM 176
           ++A+ YF++H L++ EKL +A++S  G  L W+R  E RK F  W +LK++M
Sbjct: 132 YKAEYYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERM 165

[Close]
BLAST of MELO3C028848.2 vs. TrEMBL
Match: tr|E5GCI2|E5GCI2_CUCME (Retrotransposon protein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14
Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 0 

Query: 102 DRSKFKKVEMPVFDGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEE 161
           DRSK+KK+E+PVF+G +P++W++RA+ YF I+ L D EK+ VAV+SF    ++W+R    
Sbjct: 51  DRSKYKKLEIPVFNGENPETWIYRAEHYFDINELVDEEKVKVAVVSFGPDEVNWFRWSNN 110

Query: 162 RKAFAEWDDLKQKM 176
           RK    W+DLK++M
Sbjct: 111 RKKVKTWEDLKRRM 124

[Close]
BLAST of MELO3C028848.2 vs. TrEMBL
Match: tr|A5B2I6|A5B2I6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.7e-14
Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 107 KKVEMPVFDGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFNGPALDWYRSQEERKAFA 166
           ++VEMPVF G +PD W+FRADRYF  + L++ EKL  A +S +G AL WY+  + R+ F 
Sbjct: 771 RRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSREVFG 830

Query: 167 EWDDLKQKMLV 178
            W++LK+++L+
Sbjct: 831 SWENLKRRLLL 841

The following BLAST results are available for this feature:
BLAST of MELO3C028848.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903467.14.5e-3234.74PREDICTED: uncharacterized protein LOC107992206 [Cucumis melo][more]
XP_016902037.11.0e-3137.21PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Cucumis melo][more]
XP_022154744.15.7e-1946.22uncharacterized protein LOC111021922 [Momordica charantia][more]
XP_022848903.12.7e-1633.77uncharacterized protein LOC111371244 [Olea europaea var. sylvestris][more]
XP_022137369.14.5e-1633.13uncharacterized protein LOC111008840 [Momordica charantia][more]
BLAST of MELO3C028848.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67020.11.3e-0923.03unknown protein[more]
BLAST of MELO3C028848.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C028848.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E5H0|A0A1S4E5H0_CUCME3.0e-3234.74uncharacterized protein LOC107992206 OS=Cucumis melo OX=3656 GN=LOC107992206 PE=... [more]
tr|A0A1S4E1D6|A0A1S4E1D6_CUCME6.6e-3237.21transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496677 ... [more]
tr|E5GC35|E5GC35_CUCME3.9e-1630.81Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo OX=412675 P... [more]
tr|E5GCI2|E5GCI2_CUCME1.3e-1448.65Retrotransposon protein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV... [more]
tr|A5B2I6|A5B2I6_VITVI3.7e-1447.89Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_043911 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028848.2.1MELO3C028848.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..298

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C028848.2Cucumber (Chinese Long) v3cucmedB529
MELO3C028848.2Watermelon (97103) v2medwmbB206
MELO3C028848.2Watermelon (97103) v2medwmbB216
MELO3C028848.2Wax gourdmedwgoB253
MELO3C028848.2Wax gourdmedwgoB259
MELO3C028848.2Cucumber (Gy14) v2cgybmedB458
MELO3C028848.2Cucumber (Gy14) v1cgymedB083
MELO3C028848.2Cucurbita maxima (Rimu)cmamedB456
MELO3C028848.2Cucurbita moschata (Rifu)cmomedB444
MELO3C028848.2Cucurbita pepo (Zucchini)cpemedB597
MELO3C028848.2Cucurbita pepo (Zucchini)cpemedB848
MELO3C028848.2Wild cucumber (PI 183967)cpimedB514
MELO3C028848.2Cucumber (Chinese Long) v2cumedB503
MELO3C028848.2Bottle gourd (USVL1VR-Ls)lsimedB198
MELO3C028848.2Bottle gourd (USVL1VR-Ls)lsimedB211
MELO3C028848.2Watermelon (97103) v1medwmB193
MELO3C028848.2Watermelon (Charleston Gray)medwcgB176
MELO3C028848.2Watermelon (Charleston Gray)medwcgB167
MELO3C028848.2Silver-seed gourdcarmedB0288