MELO3C028649.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C028649.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr01 : 2872461 .. 2873697 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATGCACGAGGATCAGTAACTGTTCACCTGCATCTGGCGGGATTCTGCAGCCGACGACGGCGACTGTTTTAATTAGTTTTTGACACTTGAATTTGAGCACAGTCATGTGGAAATCGGAGAGTAAATCTAAAAGAGACAGCTACAAGGCTTAAAAGTAGGAAAACAAAATTAACAAAATTCACAAAATTTAGATTTAGCTCACAAATTCATCTTTTGTTGTTCTAAAAAGAAATATATATTTAGTACTAAAAGTCCTACCCGTTCTAATTGATATTGGACCCTTTGTGGCCTAAGCCTTAAGTTAAGGCCCACTTTTTATGGGCTGAAGCCCACTAAGATTATTCCAAATGAGACTGAATGTCTATTTTCTTTTCCTTCTGTGTTTAAATGACTTACAGGTGTAAAAATAATGTCTATAAATACTCTAAAGTGAATCCAAACAGGGCTATGTTTGAATTAGCAAGTATAGTAAAATAATTTTCTAGACAGTTTATTAGAACCTACCACTACAGTAGAAAACTAAACATAAATTCTACGTCAAGTAAACTCATATATTCTGTCATGCTCTCTGATACATATTACAAGCAAGGTCTTATAGAAATGTCATATCAGCCTAGGGAGATTCATGTTTGAATTCCTGTCATTTTCTCTCTAATATTCATTTTCACCCACAACGTGAGTAGAGTGGTGAAATATTTATGTAATTAAGCTTTGAGATTGACAAGTTAATAGATTTTTATATATTTTTGTAAATACTGTTTCATGAACATTCATGATGAAATTATTAAGTCATGGCAGAAATCATAGTACTCAAACTATAATTAAGTTCTTGATTTTTTAGGCAGTAAAGAAGGGGTAAGTTTCATATCTAAAGTTACAACTCCCACCAACCACTCTTCCACCAACTTTAGCTCCATTTGCACAGCAATACGGAAGCTCAGCAATGGCATCGTCAAGACATTTCTTGCAATCTGCAGTCCAAAGATCTCTTGTACACTGAACTAATCCATACAACTTCTTGGAGCTCCCAATCTCCAAGTCTCCAATGGCATACAAATTCCTTGAAGTTTTAGCCATTTCAGACAACCCATTAAGTAAGTTCTTAACTTGCTCCTTAAACGATGTCGGATCATCAGCCTCACGAACATTCACTAAATAGAACCTAAACCCTCCATTTTGATTCTTCCCAAAGAATTTTGCATTTGAGTATTTCAAAAGGCATGAATCATACCA

mRNA sequence

ATGTCATGCACGAGGATCAGTAACTGTTCACCTGCATCTGGCGGGATTCTGCAGCCGACGACGGCGACTGTTTTAATTAGCAGTAAAGAAGGGGTAAGTTTCATATCTAAAGTTACAACTCCCACCAACCACTCTTCCACCAACTTTAGCTCCATTTGCACAGCAATACGGAAGCTCAGCAATGGCATCGTCAAGACATTTCTTGCAATCTGCAGTCCAAAGATCTCTTGTACACTGAACTAATCCATACAACTTCTTGGAGCTCCCAATCTCCAAGTCTCCAATGGCATACAAATTCCTTGAAGTTTTAGCCATTTCAGACAACCCATTAAGTAAGTTCTTAACTTGCTCCTTAAACGATGTCGGATCATCAGCCTCACGAACATTCACTAAATAGAACCTAAACCCTCCATTTTGATTCTTCCCAAAGAATTTTGCATTTGAGTATTTCAAAAGGCATGAATCATACCA

Coding sequence (CDS)

ATGTCATGCACGAGGATCAGTAACTGTTCACCTGCATCTGGCGGGATTCTGCAGCCGACGACGGCGACTGTTTTAATTAGCAGTAAAGAAGGGGTAAGTTTCATATCTAAAGTTACAACTCCCACCAACCACTCTTCCACCAACTTTAGCTCCATTTGCACAGCAATACGGAAGCTCAGCAATGGCATCGTCAAGACATTTCTTGCAATCTGCAGTCCAAAGATCTCTTGTACACTGAACTAA

Protein sequence

MSCTRISNCSPASGGILQPTTATVLISSKEGVSFISKVTTPTNHSSTNFSSICTAIRKLSNGIVKTFLAICSPKISCTLN
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C028649.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028649.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C028649.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C028649.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028649.2.1MELO3C028649.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C028649.2CmaCh19G009380Cucurbita maxima (Rimu)cmamedB534
MELO3C028649.2CmoCh19G009640Cucurbita moschata (Rifu)cmomedB521
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C028649.2Silver-seed gourdcarmedB0034
MELO3C028649.2Silver-seed gourdcarmedB0351
MELO3C028649.2Silver-seed gourdcarmedB0650
MELO3C028649.2Silver-seed gourdcarmedB0728
MELO3C028649.2Silver-seed gourdcarmedB0874
MELO3C028649.2Cucumber (Chinese Long) v3cucmedB036
MELO3C028649.2Cucumber (Chinese Long) v3cucmedB100
MELO3C028649.2Cucumber (Chinese Long) v3cucmedB463
MELO3C028649.2Cucumber (Chinese Long) v3cucmedB536
MELO3C028649.2Watermelon (97103) v2medwmbB168
MELO3C028649.2Watermelon (97103) v2medwmbB157
MELO3C028649.2Watermelon (97103) v2medwmbB164
MELO3C028649.2Watermelon (97103) v2medwmbB177
MELO3C028649.2Wax gourdmedwgoB212
MELO3C028649.2Wax gourdmedwgoB236
MELO3C028649.2Wax gourdmedwgoB237
MELO3C028649.2Cucumber (Gy14) v2cgybmedB085
MELO3C028649.2Cucumber (Gy14) v2cgybmedB465
MELO3C028649.2Cucumber (Gy14) v1cgymedB020
MELO3C028649.2Cucumber (Gy14) v1cgymedB072
MELO3C028649.2Cucumber (Gy14) v1cgymedB246
MELO3C028649.2Cucurbita maxima (Rimu)cmamedB107
MELO3C028649.2Cucurbita maxima (Rimu)cmamedB225
MELO3C028649.2Cucurbita maxima (Rimu)cmamedB590
MELO3C028649.2Cucurbita maxima (Rimu)cmamedB642
MELO3C028649.2Cucurbita maxima (Rimu)cmamedB884
MELO3C028649.2Cucurbita moschata (Rifu)cmomedB096
MELO3C028649.2Cucurbita moschata (Rifu)cmomedB577
MELO3C028649.2Cucurbita moschata (Rifu)cmomedB630
MELO3C028649.2Cucurbita moschata (Rifu)cmomedB670
MELO3C028649.2Cucurbita pepo (Zucchini)cpemedB261
MELO3C028649.2Cucurbita pepo (Zucchini)cpemedB317
MELO3C028649.2Cucurbita pepo (Zucchini)cpemedB721
MELO3C028649.2Cucurbita pepo (Zucchini)cpemedB817
MELO3C028649.2Wild cucumber (PI 183967)cpimedB097
MELO3C028649.2Wild cucumber (PI 183967)cpimedB454
MELO3C028649.2Wild cucumber (PI 183967)cpimedB523
MELO3C028649.2Cucumber (Chinese Long) v2cumedB097
MELO3C028649.2Cucumber (Chinese Long) v2cumedB446
MELO3C028649.2Cucumber (Chinese Long) v2cumedB509
MELO3C028649.2Melon (DHL92) v3.6.1medmedB038
MELO3C028649.2Melon (DHL92) v3.6.1medmedB062
MELO3C028649.2Melon (DHL92) v3.6.1medmedB099
MELO3C028649.2Bottle gourd (USVL1VR-Ls)lsimedB067
MELO3C028649.2Bottle gourd (USVL1VR-Ls)lsimedB101
MELO3C028649.2Watermelon (Charleston Gray)medwcgB189
MELO3C028649.2Watermelon (Charleston Gray)medwcgB190
MELO3C028649.2Watermelon (Charleston Gray)medwcgB194
MELO3C028649.2Watermelon (Charleston Gray)medwcgB202
MELO3C028649.2Watermelon (97103) v1medwmB220
MELO3C028649.2Watermelon (97103) v1medwmB230
MELO3C028649.2Watermelon (97103) v1medwmB237
MELO3C028649.2Watermelon (97103) v1medwmB240