MELO3C026975.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026975.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	40S ribosomal protein S15a
Location	chr07 : 7034513 .. 7035809 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTTTTCACTCAGCCGTTGAAGAACCAGAAGCCCTAATTCCCATTCGAAGTCTGCAACTTTAGTCTTCTGGCCTCCCTTCTCTCTCGGGTTTGTTTTGAATTTCTTTGTTTTCAATCTTTCATTACTTCTTCTGGTTGATGATTTAAGCGTACAAGTCAAATTTATACACCGTTCATAGATAAATTGGATTTTTTAAAAGAAGGGATTGATTGTGTTTTTTGTTAATTAATCTCATAGATTGTTTTGTTATTTAATGATTCATATTAGAAGTAGGGTTTTATCATTTAAAATGATATACACTTTTTTAGTTGTTCGTTTAACTTTTGCGGCATTCTTAACTTGAACTTTGGGGATTTATGTATTTGCAGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGTACACGTTGTTTAGCAATTTCATATCCATCTCATTCGCTGCAACACCTTAAACCTGTTTAATTTTGGTTCTGTTAAAAATTTCATTGTTTTAGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTACTTGTATTATGCTTAAGACCTGTTTGTATTTTATTCGAATCCAAACTTTTATAAAAAAATGTCATTCGCACGATTGCAGTTTGGATTCATTGTGTTGACTACGTCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTATGAGATTGGTTTTACTTCTTTTTGGTATTTTCGCACTTTTGAACTTAGATGGGAAGAAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGGTTACAGGAGATTTGGCCTGCATTCTTTTTGAAGACTTTCATGAGCCAATTTTCTTAGTCTATGAGTTTTATTTGTTTGCTATACTGAAACTGGAATTGCCATAGTTATCAAGCTTTGGAATTCATTGCAATTTTTTCAGACAGCAATTATCCTTCCCTCGCCCATCAATTTGTGTGTTCTATATCTCATGTTTATGTATGATTCCTTTTCCAGCTTTTGATG

mRNA sequence

TCTCTCTTTTCACTCAGCCGTTGAAGAACCAGAAGCCCTAATTCCCATTCGAAGTCTGCAACTTTAGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTACTTGTATTATGCTTAAGACCTGTTTGTATTTTATTCGAATCCAAACTTTTATAAAAAAATGTCATTCGCACGATTGCAGTTTGGATTCATTGTGTTGACTACGTCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTATGAGATTGGTTTTACTTCTTTTTGGTATTTTCGCACTTTTGAACTTAGATGGGAAGAAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGGTTACAGGAGATTTGGCCTGCATTCTTTTTGAAGACTTTCATGAGCCAATTTTCTTAGTCTATGAGTTTTATTTGTTTGCTATACTGAAACTGGAATTGCCATAGTTATCAAGCTTTGGAATTCATTGCAATTTTTTCAGACAGCAATTATCCTTCCCTCGCCCATCAATTTGTGTGTTCTATATCTCATGTTTATGTATGATTCCTTTTCCAGCTTTTGATG

Coding sequence (CDS)

ATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTACTTGTATTATGCTTAAGACCTGTTTGTATTTTATTCGAATCCAAACTTTTATAAAAAAATGTCATTCGCACGATTGCAGTTTGGATTCATTGTGTTGA

Protein sequence

MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLTCIMLKTCLYFIRIQTFIKKCHSHDCSLDSLC

Homology

[Close]

BLAST of MELO3C026975.2 vs. NCBI nr
Match: XP_013713851.1 (40S ribosomal protein S15a-like [Brassica napus])

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFF 103
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVC +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCLY 102

[Close]

BLAST of MELO3C026975.2 vs. NCBI nr
Match: KJB20165.1 (hypothetical protein B456_003G136100 [Gossypium raimondii])

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975.2 vs. NCBI nr
Match: KJB73328.1 (hypothetical protein B456_011G230200 [Gossypium raimondii])

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975.2 vs. NCBI nr
Match: KGN54938.1 (hypothetical protein Csa_4G608140 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 4.2e-48
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 85  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 144

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 145 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 187

[Close]

BLAST of MELO3C026975.2 vs. NCBI nr
Match: XP_014518151.1 (40S ribosomal protein S15a-1 [Vigna radiata var. radiata])

HSP 1 Score: 200.3 bits (508), Expect = 4.2e-48
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. TAIR10
Match: AT1G07770.1 (ribosomal protein S15A)

HSP 1 Score: 198.0 bits (502), Expect = 3.8e-51
Identity = 95/98 (96.94%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. TAIR10
Match: AT5G59850.1 (Ribosomal protein S8 family protein)

HSP 1 Score: 198.0 bits (502), Expect = 3.8e-51
Identity = 95/98 (96.94%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. TAIR10
Match: AT3G46040.1 (ribosomal protein S15A D)

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-50
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975.2 vs. TAIR10
Match: AT2G39590.1 (Ribosomal protein S8 family protein)

HSP 1 Score: 181.4 bits (459), Expect = 3.7e-46
Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 7   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 66

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ
Sbjct: 67  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQ 104

[Close]

BLAST of MELO3C026975.2 vs. TAIR10
Match: AT4G29430.1 (ribosomal protein S15A E)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 6  VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVEL 65
          +LNDAL+++ NAE+RGK  V ++P S V+  FL +M++ GYI  F+  D HR G+I V+L
Sbjct: 5  ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64

Query: 66 NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
           GR+N C  ++ R DV  KEIE +T R LP+RQ
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQ 97

[Close]

BLAST of MELO3C026975.2 vs. Swiss-Prot
Match: sp|P42798|R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 198.0 bits (502), Expect = 6.8e-50
Identity = 95/98 (96.94%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. Swiss-Prot
Match: sp|Q9LX88|R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-49
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975.2 vs. Swiss-Prot
Match: sp|Q00332|RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-49
Identity = 94/98 (95.92%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. Swiss-Prot
Match: sp|Q9AT34|RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-48
Identity = 93/98 (94.90%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. Swiss-Prot
Match: sp|O80646|R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 6.6e-45
Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1  MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ
Sbjct: 61 IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. TrEMBL
Match: tr|A0A0D2RM61|A0A0D2RM61_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G136100 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.1e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975.2 vs. TrEMBL
Match: tr|A0A0D2TC73|A0A0D2TC73_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G230200 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.1e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975.2 vs. TrEMBL
Match: tr|A0A1S3CPB7|A0A1S3CPB7_CUCME (40S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975.2 vs. TrEMBL
Match: tr|A0A1S3VIG0|A0A1S3VIG0_VIGRR (40S ribosomal protein S15a-1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775523 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975.2 vs. TrEMBL
Match: tr|Q9SBL9|Q9SBL9_CITLA (Wrp15a OS=Citrullus lanatus OX=3654 GN=wrp15a PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

The following BLAST results are available for this feature:

BLAST of MELO3C026975.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_013713851.1	1.4e-48	94.12	40S ribosomal protein S15a-like [Brassica napus]	[more]
KJB20165.1	3.2e-48	98.99	hypothetical protein B456_003G136100 [Gossypium raimondii]	[more]
KJB73328.1	3.2e-48	98.99	hypothetical protein B456_011G230200 [Gossypium raimondii]	[more]
KGN54938.1	4.2e-48	96.12	hypothetical protein Csa_4G608140 [Cucumis sativus]	[more]
XP_014518151.1	4.2e-48	100.00	40S ribosomal protein S15a-1 [Vigna radiata var. radiata]	[more]

BLAST of MELO3C026975.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07770.1	3.8e-51	96.94	ribosomal protein S15A	[more]
AT5G59850.1	3.8e-51	96.94	Ribosomal protein S8 family protein	[more]
AT3G46040.1	1.1e-50	92.23	ribosomal protein S15A D	[more]
AT2G39590.1	3.7e-46	88.78	Ribosomal protein S8 family protein	[more]
AT4G29430.1	1.1e-21	49.46	ribosomal protein S15A E	[more]

BLAST of MELO3C026975.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P42798\|R15A1_ARATH	6.8e-50	96.94	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=...	[more]
sp\|Q9LX88\|R15A4_ARATH	2.0e-49	92.23	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=...	[more]
sp\|Q00332\|RS15A_BRANA	2.0e-49	95.92	40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3	[more]
sp\|Q9AT34\|RS15A_DAUCA	1.7e-48	94.90	40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3	[more]
sp\|O80646\|R15A3_ARATH	6.6e-45	88.78	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=...	[more]

BLAST of MELO3C026975.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0D2RM61\|A0A0D2RM61_GOSRA	2.1e-48	98.99	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G136100 PE=4 ...	[more]
tr\|A0A0D2TC73\|A0A0D2TC73_GOSRA	2.1e-48	98.99	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G230200 PE=4 ...	[more]
tr\|A0A1S3CPB7\|A0A1S3CPB7_CUCME	2.8e-48	96.12	40S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1	[more]
tr\|A0A1S3VIG0\|A0A1S3VIG0_VIGRR	2.8e-48	100.00	40S ribosomal protein S15a-1 OS=Vigna radiata var. radiata OX=3916 GN=LOC1067755...	[more]
tr\|Q9SBL9\|Q9SBL9_CITLA	2.8e-48	96.12	Wrp15a OS=Citrullus lanatus OX=3654 GN=wrp15a PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR035987	Ribosomal_S8_sf
IPR000630	Ribosomal_S8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0001510	RNA methylation
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005618	cell wall
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026975.2.1	MELO3C026975.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.1370.30		coord: 1..69 e-value: 1.7E-38 score: 132.2
None	No IPR available	GENE3D	G3DSA:3.30.1490.10		coord: 70..118 e-value: 1.4E-12 score: 49.3
None	No IPR available	PANTHER	PTHR11758:SF16	RIBOSOMAL PROTEIN S15A	coord: 1..101
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 7..87 e-value: 3.2E-11 score: 43.2
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 1..101
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	SSF56047	Ribosomal protein S8	coord: 4..99

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026975.2	Csa4G608140	Cucumber (Chinese Long) v2	cumedB289
MELO3C026975.2	CSPI04G21650	Wild cucumber (PI 183967)	cpimedB293
MELO3C026975.2	Cucsa.058820	Cucumber (Gy14) v1	cgymedB044
MELO3C026975.2	CsGy4G020170	Cucumber (Gy14) v2	cgybmedB258
MELO3C026975.2	Bhi09G003004	Wax gourd	medwgoB612
MELO3C026975.2	CsaV3_4G031980	Cucumber (Chinese Long) v3	cucmedB297

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026975.2	Watermelon (97103) v2	medwmbB465
MELO3C026975.2	Wax gourd	medwgoB602
MELO3C026975.2	Cucumber (Gy14) v2	cgybmedB275
MELO3C026975.2	Cucumber (Gy14) v1	cgymedB041
MELO3C026975.2	Cucurbita maxima (Rimu)	cmamedB035
MELO3C026975.2	Cucurbita maxima (Rimu)	cmamedB500
MELO3C026975.2	Cucurbita maxima (Rimu)	cmamedB516
MELO3C026975.2	Cucurbita moschata (Rifu)	cmomedB025
MELO3C026975.2	Cucurbita moschata (Rifu)	cmomedB487
MELO3C026975.2	Cucurbita moschata (Rifu)	cmomedB503
MELO3C026975.2	Cucurbita pepo (Zucchini)	cpemedB635
MELO3C026975.2	Cucurbita pepo (Zucchini)	cpemedB639
MELO3C026975.2	Cucurbita pepo (Zucchini)	cpemedB863
MELO3C026975.2	Wild cucumber (PI 183967)	cpimedB309
MELO3C026975.2	Cucumber (Chinese Long) v2	cumedB307
MELO3C026975.2	Bottle gourd (USVL1VR-Ls)	lsimedB340
MELO3C026975.2	Watermelon (Charleston Gray)	medwcgB455
MELO3C026975.2	Watermelon (97103) v1	medwmB529
MELO3C026975.2	Silver-seed gourd	carmedB0327
MELO3C026975.2	Silver-seed gourd	carmedB1024