MELO3C026801 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026801
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHistone H2A
Locationchr8 : 27828797 .. 27829105 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGGCAAAAGCAATCCTCGTTTTCTTTTTCTTACCCCACCATCCTGTACTAGTAAGTGTCAAGCAAGAAGGAAGTACATTGAGATACCTCCCAATCAGACGAAGAAAGGCTTTACCGATAGAAGAGGCGGTGGCGGTCCTAAGAAGAAGCCTGTCTCTCGCTCTATTAAAATCGACCTCCAGTTTCCTGTCGGCGGAATCGGCTGCTACTTGAAGAATGGTTGTTACTCTCAACGAGTCAGAATCGGCGCTCTGGTTTACCTTGCTATTGTGCTTGAGTGCCTCCCTGCTGAGGTGAATCTATAA

mRNA sequence

ATGCATGGCAAAAGCAATCCTCGTTTTCTTTTTCTTACCCCACCATCCTGTACTAGTAAGTGTCAAGCAAGAAGGAAGTACATTGAGATACCTCCCAATCAGACGAAGAAAGGCTTTACCGATAGAAGAGGCGGTGGCGGTCCTAAGAAGAAGCCTGTCTCTCGCTCTATTAAAATCGACCTCCAGTTTCCTGTCGGCGGAATCGGCTGCTACTTGAAGAATGGTTGTTACTCTCAACGAGTCAGAATCGGCGCTCTGGTTTACCTTGCTATTGTGCTTGAGTGCCTCCCTGCTGAGGTGAATCTATAA

Coding sequence (CDS)

ATGCATGGCAAAAGCAATCCTCGTTTTCTTTTTCTTACCCCACCATCCTGTACTAGTAAGTGTCAAGCAAGAAGGAAGTACATTGAGATACCTCCCAATCAGACGAAGAAAGGCTTTACCGATAGAAGAGGCGGTGGCGGTCCTAAGAAGAAGCCTGTCTCTCGCTCTATTAAAATCGACCTCCAGTTTCCTGTCGGCGGAATCGGCTGCTACTTGAAGAATGGTTGTTACTCTCAACGAGTCAGAATCGGCGCTCTGGTTTACCTTGCTATTGTGCTTGAGTGCCTCCCTGCTGAGGTGAATCTATAA

Protein sequence

MHGKSNPRFLFLTPPSCTSKCQARRKYIEIPPNQTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLECLPAEVNL*
Homology
[Close]
BLAST of MELO3C026801 vs. Swiss-Prot
Match: H2A4_ORYSJ (Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17
Identity = 47/65 (72.31%), Postives = 47/65 (72.31%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           K G   RRGGGGPKKKPVSRS+K  LQFPVG IG YLK G YSQR+  GA VYLA VLE 
Sbjct: 10  KAGAGGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEY 69

Query: 96  LPAEV 101
           L AEV
Sbjct: 70  LAAEV 74

[Close]
BLAST of MELO3C026801 vs. Swiss-Prot
Match: H2A4_ORYSI (Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17
Identity = 47/65 (72.31%), Postives = 47/65 (72.31%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           K G   RRGGGGPKKKPVSRS+K  LQFPVG IG YLK G YSQR+  GA VYLA VLE 
Sbjct: 10  KAGAGGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEY 69

Query: 96  LPAEV 101
           L AEV
Sbjct: 70  LAAEV 74

[Close]
BLAST of MELO3C026801 vs. Swiss-Prot
Match: H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.4e-17
Identity = 47/67 (70.15%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 34  QTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVL 93
           + KKG   RR GGGPKKKPVSRS+K  LQFPVG IG YLK G YS+RV  GA VYLA VL
Sbjct: 6   KVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVL 65

Query: 94  ECLPAEV 101
           E L AEV
Sbjct: 66  EYLAAEV 72

[Close]
BLAST of MELO3C026801 vs. Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.1e-15
Identity = 45/65 (69.23%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           KKG  +R+ GGGPKKKPVSRS+K  LQFPVG IG +LK G Y+QRV  GA VYLA VLE 
Sbjct: 8   KKGAGERK-GGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEY 67

Query: 96  LPAEV 101
           L AEV
Sbjct: 68  LAAEV 71

[Close]
BLAST of MELO3C026801 vs. Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14
Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 34  QTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVL 93
           +TKKG   R+GGG P+KK V+RSI+  LQFPVG IG YLK G Y+QRV  GA VYLA VL
Sbjct: 6   KTKKGAGGRKGGG-PRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVL 65

Query: 94  ECLPAEV 101
           E L AEV
Sbjct: 66  EYLAAEV 71

[Close]
BLAST of MELO3C026801 vs. TrEMBL
Match: K3ZAC4_SETIT (Histone H2A OS=Setaria italica GN=SETIT_023495mg PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-16
Identity = 48/65 (73.85%), Postives = 50/65 (76.92%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           KKG   RRGGGGPKKKPVSRS+K  LQFPVG IG YLK G YSQR+  GA VYLA VLE 
Sbjct: 9   KKGAAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEY 68

Query: 96  LPAEV 101
           L AEV
Sbjct: 69  LAAEV 73

[Close]
BLAST of MELO3C026801 vs. TrEMBL
Match: A0A0A0KXF2_CUCSA (Histone H2A OS=Cucumis sativus GN=Csa_4G293870 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-15
Identity = 48/67 (71.64%), Postives = 50/67 (74.63%), Query Frame = 1 

Query: 34  QTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVL 93
           + KKGF  RRGG   KKKPVSRS+K  LQFPVG IG YLKNG YSQRV  GA VYLA VL
Sbjct: 6   KAKKGFAGRRGGADSKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVYLAAVL 65

Query: 94  ECLPAEV 101
           E L AEV
Sbjct: 66  EYLAAEV 72

[Close]
BLAST of MELO3C026801 vs. TrEMBL
Match: A0A0D9WHD2_9ORYZ (Histone H2A OS=Leersia perrieri PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.9e-15
Identity = 47/65 (72.31%), Postives = 49/65 (75.38%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           K G   RRGGGGPKKKPVSRS+K  LQFPVG IG YLK G YSQR+  GA VYLA VLE 
Sbjct: 10  KAGAGGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEY 69

Query: 96  LPAEV 101
           L AEV
Sbjct: 70  LAAEV 74

[Close]
BLAST of MELO3C026801 vs. TrEMBL
Match: B4FJK0_MAIZE (Histone H2A OS=Zea mays GN=gpm729 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.9e-15
Identity = 47/65 (72.31%), Postives = 49/65 (75.38%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           KK    RRGGGGPKKKPVSRS+K  LQFPVG IG YLK G YSQRV  GA VYLA VLE 
Sbjct: 9   KKAAAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPVYLAAVLEY 68

Query: 96  LPAEV 101
           L AE+
Sbjct: 69  LAAEL 73

[Close]
BLAST of MELO3C026801 vs. TrEMBL
Match: B6TMR1_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.9e-15
Identity = 47/65 (72.31%), Postives = 49/65 (75.38%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           KK    RRGGGGPKKKPVSRS+K  LQFPVG IG YLK G YSQRV  GA VYLA VLE 
Sbjct: 9   KKAAAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPVYLAAVLEY 68

Query: 96  LPAEV 101
           L AE+
Sbjct: 69  LAAEL 73

[Close]
BLAST of MELO3C026801 vs. TAIR10
Match: AT5G02560.2 (AT5G02560.2 histone H2A 12)

HSP 1 Score: 87.4 bits (215), Expect = 5.5e-18
Identity = 46/66 (69.70%), Postives = 47/66 (71.21%), Query Frame = 1 

Query: 34  QTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVL 93
           + KKG   RR GGGPKKKPVSRS+K  LQFPVG IG YLK G YS+RV  GA VYLA VL
Sbjct: 6   KVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVL 65

Query: 94  ECLPAE 100
           E L AE
Sbjct: 66  EYLAAE 71

[Close]
BLAST of MELO3C026801 vs. TAIR10
Match: AT5G59870.1 (AT5G59870.1 histone H2A 6)

HSP 1 Score: 67.4 bits (163), Expect = 5.9e-12
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 1 

Query: 34  QTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVL 93
           + KK F  R+  G PK K VS+S+K  LQFPVG I  +LK G Y+QR+  GA VY+A VL
Sbjct: 6   KVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVL 65

Query: 94  ECLPAEV 101
           E L AEV
Sbjct: 66  EYLAAEV 72

[Close]
BLAST of MELO3C026801 vs. TAIR10
Match: AT5G27670.1 (AT5G27670.1 histone H2A 7)

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-10
Identity = 34/55 (61.82%), Postives = 36/55 (65.45%), Query Frame = 1 

Query: 46  GGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLECLPAEV 101
           GG +KK VS+S+K  LQFPVG I  YLK G Y+ R   GA VYLA VLE L AEV
Sbjct: 19  GGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEV 73

[Close]
BLAST of MELO3C026801 vs. TAIR10
Match: AT3G20670.1 (AT3G20670.1 histone H2A 13)

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10
Identity = 35/56 (62.50%), Postives = 35/56 (62.50%), Query Frame = 1 

Query: 45  GGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLECLPAEV 101
           G G  KK  SRS K  LQFPVG I  +LKNG Y+ RV  GA VYLA VLE L AEV
Sbjct: 9   GSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEV 64

[Close]
BLAST of MELO3C026801 vs. TAIR10
Match: AT4G27230.1 (AT4G27230.1 histone H2A 2)

HSP 1 Score: 60.5 bits (145), Expect = 7.2e-10
Identity = 34/56 (60.71%), Postives = 35/56 (62.50%), Query Frame = 1 

Query: 45  GGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLECLPAEV 101
           G G  KK  SRS K  LQFPVG I  +LK G Y++RV  GA VYLA VLE L AEV
Sbjct: 9   GSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEV 64

[Close]
BLAST of MELO3C026801 vs. NCBI nr
Match: gi|659130580|ref|XP_008465242.1| (PREDICTED: histone H2A-like [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-51
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

Query: 1   MHGKSNPRFLFLTPPSCTSKCQARRKYIEIPPNQTKKGFTDRRGGGGPKKKPVSRSIKID 60
           MHGKSNPRFLFLTPPSCTSKCQARRKYIEIPPNQTKKGFTDRRGGGGPKKKPVSRSIKID
Sbjct: 1   MHGKSNPRFLFLTPPSCTSKCQARRKYIEIPPNQTKKGFTDRRGGGGPKKKPVSRSIKID 60

Query: 61  LQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLECLPAE 100
           LQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLECLPAE
Sbjct: 61  LQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLECLPAE 99

[Close]
BLAST of MELO3C026801 vs. NCBI nr
Match: gi|659068988|ref|XP_008447608.1| (PREDICTED: probable histone H2A.4 [Cucumis melo])

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-17
Identity = 50/67 (74.63%), Postives = 52/67 (77.61%), Query Frame = 1 

Query: 34  QTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVL 93
           + KKGF  RRGG GPKKKPVSRS+K  LQFPVG IG YLKNG YSQRV  GA VYLA VL
Sbjct: 6   KAKKGFAGRRGGAGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVYLAAVL 65

Query: 94  ECLPAEV 101
           E L AEV
Sbjct: 66  EYLAAEV 72

[Close]
BLAST of MELO3C026801 vs. NCBI nr
Match: gi|514749347|ref|XP_004961835.1| (PREDICTED: probable histone H2A.4 [Setaria italica])

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-16
Identity = 48/65 (73.85%), Postives = 50/65 (76.92%), Query Frame = 1 

Query: 36  KKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVLEC 95
           KKG   RRGGGGPKKKPVSRS+K  LQFPVG IG YLK G YSQR+  GA VYLA VLE 
Sbjct: 9   KKGAAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEY 68

Query: 96  LPAEV 101
           L AEV
Sbjct: 69  LAAEV 73

[Close]
BLAST of MELO3C026801 vs. NCBI nr
Match: gi|449448657|ref|XP_004142082.1| (PREDICTED: probable histone H2A.4 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15
Identity = 48/67 (71.64%), Postives = 50/67 (74.63%), Query Frame = 1 

Query: 34  QTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALVYLAIVL 93
           + KKGF  RRGG   KKKPVSRS+K  LQFPVG IG YLKNG YSQRV  GA VYLA VL
Sbjct: 6   KAKKGFAGRRGGADSKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVYLAAVL 65

Query: 94  ECLPAEV 101
           E L AEV
Sbjct: 66  EYLAAEV 72

[Close]
BLAST of MELO3C026801 vs. NCBI nr
Match: gi|1012032138|ref|XP_015952280.1| (PREDICTED: histone H2A-like [Arachis duranensis])

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-15
Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 28  IEIPPNQTKKGFTDRRGGGGPKKKPVSRSIKIDLQFPVGGIGCYLKNGCYSQRVRIGALV 87
           ++ P  +TKKG   RR GGGPK+KPVSRS+K  LQFPVG IG YLK G YSQRV  GA V
Sbjct: 1   MDSPAGKTKKGAAGRR-GGGPKRKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPV 60

Query: 88  YLAIVLECLPAEV 101
           YLA VLE L AEV
Sbjct: 61  YLAAVLEYLAAEV 72

The following BLAST results are available for this feature:
BLAST of MELO3C026801 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H2A4_ORYSJ2.6e-1772.31Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1[more]
H2A4_ORYSI2.6e-1772.31Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1[more]
H2A4_ARATH3.4e-1770.15Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1[more]
H2A_EUPES4.1e-1569.23Histone H2A OS=Euphorbia esula PE=2 SV=1[more]
H2A2_MEDTR3.5e-1465.67Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1[more]
BLAST of MELO3C026801 vs. TrEMBL
Match NameE-valueIdentityDescription
K3ZAC4_SETIT3.4e-1673.85Histone H2A OS=Setaria italica GN=SETIT_023495mg PE=3 SV=1[more]
A0A0A0KXF2_CUCSA1.3e-1571.64Histone H2A OS=Cucumis sativus GN=Csa_4G293870 PE=3 SV=1[more]
A0A0D9WHD2_9ORYZ2.9e-1572.31Histone H2A OS=Leersia perrieri PE=3 SV=1[more]
B4FJK0_MAIZE2.9e-1572.31Histone H2A OS=Zea mays GN=gpm729 PE=2 SV=1[more]
B6TMR1_MAIZE2.9e-1572.31Histone H2A OS=Zea mays PE=2 SV=1[more]
BLAST of MELO3C026801 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G02560.25.5e-1869.70 histone H2A 12[more]
AT5G59870.15.9e-1255.22 histone H2A 6[more]
AT5G27670.11.9e-1061.82 histone H2A 7[more]
AT3G20670.12.5e-1062.50 histone H2A 13[more]
AT4G27230.17.2e-1060.71 histone H2A 2[more]
BLAST of MELO3C026801 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130580|ref|XP_008465242.1|1.6e-51100.00PREDICTED: histone H2A-like [Cucumis melo][more]
gi|659068988|ref|XP_008447608.1|3.4e-1774.63PREDICTED: probable histone H2A.4 [Cucumis melo][more]
gi|514749347|ref|XP_004961835.1|4.8e-1673.85PREDICTED: probable histone H2A.4 [Setaria italica][more]
gi|449448657|ref|XP_004142082.1|1.8e-1571.64PREDICTED: probable histone H2A.4 [Cucumis sativus][more]
gi|1012032138|ref|XP_015952280.1|3.1e-1567.12PREDICTED: histone H2A-like [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026801T1MELO3C026801T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 51..73
score: 4.6E-9coord: 80..95
score: 4.
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 45..100
score: 6.3
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 37..100
score: 1.83
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 31..100
score: 1.3
NoneNo IPR availablePANTHERPTHR23430:SF80SUBFAMILY NOT NAMEDcoord: 31..100
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026801Silver-seed gourdcarmeB0479
MELO3C026801Cucurbita maxima (Rimu)cmameB614
MELO3C026801Cucurbita maxima (Rimu)cmameB813
MELO3C026801Cucurbita moschata (Rifu)cmomeB797
MELO3C026801Cucurbita pepo (Zucchini)cpemeB075
MELO3C026801Cucurbita pepo (Zucchini)cpemeB454