MELO3C026796 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026796
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUracil-DNA glycosylase
Locationchr10 : 13906794 .. 13907567 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTCTCCGCAGCTACCAACAACACCTACAATGGCTTCTTCCTCCGCTTCACTGTCATCCAAAACCAGAACCTTAATCGATATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACTTCACAGACATTGAAAACCCTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCACTGACATGTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTATGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTCGAAGCTCTTCCTGGAGAGTTCGAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAGATTTGCAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTCAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGTGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAAGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCTGTTCAGGTGCTGTTGTCTTTCATTTATTTGCTCTGTAGACTTAGATATGCTTACTTAAATGTATCTACTTCTGTAATATATCGGTATTGTGAATTTTCTGGTGCTGCATAA

mRNA sequence

TCCTCTCCGCAGCTACCAACAACACCTACAATGGCTTCTTCCTCCGCTTCACTGTCATCCAAAACCAGAACCTTAATCGATATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACTTCACAGACATTGAAAACCCTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCACTGACATGTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTATGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTCGAAGCTCTTCCTGGAGAGTTCGAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAGATTTGCAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTCAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGTGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAAGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCTGTTCAGGTGCTGTTGTCTTTCATTTATTTGCTCTGTAGACTTAGATATGCTTACTTAAATGTATCTACTTCTGTAATATATCGGTATTGTGAATTTTCTGGTGCTGCATAA

Coding sequence (CDS)

ATGGCTTCTTCCTCCGCTTCACTGTCATCCAAAACCAGAACCTTAATCGATATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACTTCACAGACATTGAAAACCCTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCACTGACATGTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTATGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTCGAAGCTCTTCCTGGAGAGTTCGAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAGATTTGCAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTCAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGTGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAAGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCTGTTCAGGTGCTGTTGTCTTTCATTTATTTGCTCTGTAGACTTAGATATGCTTACTTAAATGTATCTACTTCTGTAATATATCGGTATTGTGAATTTTCTGGTGCTGCATAA

Protein sequence

MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLLSFIYLLCRLRYAYLNVSTSVIYRYCEFSGAA*
Homology
[Close]
BLAST of MELO3C026796 vs. Swiss-Prot
Match: UNG_ARATH (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana GN=UNG PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.7e-60
Identity = 129/228 (56.58%), Postives = 157/228 (68.86%), Query Frame = 1 

Query: 9   SSKTRTLIDIFQPALSKRLKTSQT---------------LKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK S +               L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  TDMSASQISRMETNKWMARSKRNLKICSDRVSKW--ENGC-MKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL +CS+RV+K   E  C + L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FEKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQ +L
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVL 228

[Close]
BLAST of MELO3C026796 vs. Swiss-Prot
Match: UNG_AZOVD (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ung PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.5e-34
Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 1 

Query: 95  EELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + +E +W EAL  EFEKPY   L  F++ E  ++G  IYPP SLIFNAL+STP D+VK
Sbjct: 6   DRVRLEASWKEALHDEFEKPYMQELSDFLRREK-AAGKEIYPPGSLIFNALDSTPLDQVK 65

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQV 214
           VVI+GQDPYHGPGQA GL FSV  GV +P SL NIFKELK DL   IP HG+L +WA Q 
Sbjct: 66  VVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQG 125

Query: 215 LL 217
           +L
Sbjct: 126 VL 126

[Close]
BLAST of MELO3C026796 vs. Swiss-Prot
Match: UNG_PSEPF (Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ung PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 72/122 (59.02%), Postives = 85/122 (69.67%), Query Frame = 1 

Query: 95  EELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + +E +W EAL  EF++PY   L  F+Q E  ++G  IYPP  +IFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKEALRAEFDQPYMTELRTFLQQER-AAGKEIYPPGPMIFNALNSTPLDKVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQV 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KELK DL   IP+HG L  WA Q 
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWADQG 124

Query: 215 LL 217
           +L
Sbjct: 125 VL 125

[Close]
BLAST of MELO3C026796 vs. Swiss-Prot
Match: UNG_CAMHC (Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ung PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 73/127 (57.48%), Postives = 91/127 (71.65%), Query Frame = 1 

Query: 92  MKLEELLVEETWFEALPGEFEKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTP 151
           +KLE + +E++W E L GEF  PY L + + +   +C  +SGV IYPP +LIFNA N TP
Sbjct: 3   IKLENIKIEKSWKEVLKGEFLSPYFLEIKEKL---VCLKNSGVTIYPPGNLIFNAFNLTP 62

Query: 152 FDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGK 211
           FD+VKVVILGQDPYH   QAMGLSFSVP+ V+IP SL+NIFKE+  DLG + P+ G+L  
Sbjct: 63  FDKVKVVILGQDPYHEVNQAMGLSFSVPKDVRIPPSLINIFKEINSDLGINEPNCGDLTF 122

Query: 212 WAVQVLL 217
           WA Q +L
Sbjct: 123 WAKQGVL 126

[Close]
BLAST of MELO3C026796 vs. Swiss-Prot
Match: UNG_PSEF5 (Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ung PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 71/122 (58.20%), Postives = 86/122 (70.49%), Query Frame = 1 

Query: 95  EELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + +E +W EAL  EF++PY   L +F++ E  ++G  IYPP  +IFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKEALRAEFDQPYMSELREFLRQEH-AAGKEIYPPGPMIFNALNSTPLDKVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQV 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KELK DL   IP+HG L  WA Q 
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWAEQG 124

Query: 215 LL 217
           +L
Sbjct: 125 VL 125

[Close]
BLAST of MELO3C026796 vs. TrEMBL
Match: A0A0A0KMG3_CUCSA (Uracil-DNA glycosylase OS=Cucumis sativus GN=Csa_5G289610 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.7e-114
Identity = 207/216 (95.83%), Postives = 213/216 (98.61%), Query Frame = 1 

Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQ +L
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVL 216

[Close]
BLAST of MELO3C026796 vs. TrEMBL
Match: W9RJ98_9ROSA (Uracil-DNA glycosylase OS=Morus notabilis GN=L484_009862 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-65
Identity = 139/227 (61.23%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 8   LSSKTRTLIDIFQPAL---SKRLKTSQTLKTLATNDDKCDSDLTLASSSTD--------- 67
           ++SK +TL D F P     +KRLK     +TL++ ++KCD++  + + S+          
Sbjct: 1   MASKAKTLTDFFPPLQQPSAKRLK-----QTLSSTNNKCDANGIIPNRSSSSSGIGDGGA 60

Query: 68  --MSASQISRMETNKWMARSKRNLKICSDRVS--KWENGC--MKLEELLVEETWFEALPG 127
             +SA Q SRME  K +A+S+RNLKICS RVS  + E GC  +KLEELLVEE+W EALPG
Sbjct: 61  DGLSADQKSRMEFQKVLAKSRRNLKICSQRVSNSQSEGGCGYVKLEELLVEESWLEALPG 120

Query: 128 EFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQA 187
           EF+KPYA NL KF+++E  + GV +YPP  LIFNALNSTPFDRVK VILGQDPYHG GQA
Sbjct: 121 EFQKPYAKNLSKFLESETSAVGVTVYPPSHLIFNALNSTPFDRVKAVILGQDPYHGLGQA 180

Query: 188 MGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           MGLSFSVPEGVK+PSSL+NIFKELK D+GCSIPSHGNL KWAVQ +L
Sbjct: 181 MGLSFSVPEGVKVPSSLVNIFKELKQDVGCSIPSHGNLEKWAVQGVL 222

[Close]
BLAST of MELO3C026796 vs. TrEMBL
Match: M5XNR7_PRUPE (Uracil-DNA glycosylase OS=Prunus persica GN=PRUPE_ppa022483mg PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-65
Identity = 134/211 (63.51%), Postives = 157/211 (74.41%), Query Frame = 1 

Query: 10  SKTRTLIDIFQPALS--KRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQISRMETN 69
           +K +TL+D+FQP  S  KRLKT     T + +           SSS+D++A Q SRME  
Sbjct: 5   NKNKTLLDLFQPTASSAKRLKTDSIRATHSDSVSPVPPPSHDDSSSSDLTAQQKSRMEFQ 64

Query: 70  KWMARSKRNLKICSDRVSKWENGC--MKLEELLVEETWFEALPGEFEKPYALNLCKFVQT 129
           K +A+++RNL ICS+R+S   +    +KLEELLVEETW EA P E +KPYA  L KFV+ 
Sbjct: 65  KLLAKARRNLSICSNRLSNSNSKGEGVKLEELLVEETWLEAFPSELQKPYAKTLSKFVEN 124

Query: 130 EICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSS 189
           EIC   +PIYPP  LIFNALNSTPFDRVK VILGQDPYHGPGQAMGLSFSVPEGVK+PSS
Sbjct: 125 EICGGALPIYPPTHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSS 184

Query: 190 LLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           L+NIFKEL  DLGCSIPSHGNL KWAVQ +L
Sbjct: 185 LVNIFKELHQDLGCSIPSHGNLEKWAVQGVL 215

[Close]
BLAST of MELO3C026796 vs. TrEMBL
Match: B9HY10_POPTR (Uracil-DNA glycosylase OS=Populus trichocarpa GN=POPTR_0010s17670g PE=3 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64
Identity = 129/211 (61.14%), Postives = 160/211 (75.83%), Query Frame = 1 

Query: 8   LSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQISRMETN 67
           +++ ++T++D  QPA  KRLK S +  +     +  +  L+  S+STD++  Q+SR+E N
Sbjct: 1   MAASSKTIMDFLQPA--KRLKLSSSSPSPIDPLNLLNKSLSAKSTSTDLTPDQVSRIELN 60

Query: 68  KWMARSKRNLKICSDRVS--KWENGCMKLEELLVEETWFEALPGEFEKPYALNLCKFVQT 127
           K  A+SKRNLK+CS  VS  K  +G + LEELLVE TW E LPGE EKPY  NLCKFV++
Sbjct: 61  KLRAKSKRNLKLCSQLVSNSKGSSGHVNLEELLVENTWREVLPGELEKPYFKNLCKFVES 120

Query: 128 EICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSS 187
           EI +  V IYPP  LIFNALNSTPF+ +K VI+GQDPYHGPGQAMGLSFSVP+GVK PSS
Sbjct: 121 EISNGSVAIYPPQHLIFNALNSTPFNTLKAVIIGQDPYHGPGQAMGLSFSVPQGVKAPSS 180

Query: 188 LLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           L+NIFKELK DLGCSIPSHGNL KWA+Q +L
Sbjct: 181 LVNIFKELKQDLGCSIPSHGNLEKWAIQGVL 209

[Close]
BLAST of MELO3C026796 vs. TrEMBL
Match: A0A068UAV2_COFCA (Uracil-DNA glycosylase OS=Coffea canephora GN=GSCOC_T00020450001 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 135/236 (57.20%), Postives = 176/236 (74.58%), Query Frame = 1 

Query: 8   LSSKTRTLIDIFQPALSKRLK--------TSQTLKTLATN------------DDKCDSD- 67
           +++ ++T++D+F+   +KRLK        T+  L T  ++            +D   S+ 
Sbjct: 1   MAASSKTIMDLFKQPAAKRLKRVSSPAPPTTTKLATFCSSSSSPIDGGKHDQNDVASSNP 60

Query: 68  --LTLASSSTD---MSASQISRMETNKWMARSKRNLKICSDRVSKWEN-GCMKLEELLVE 127
             + L  SST    ++A + SR+E NK +AR++RNLK+CSD+++K E+ GC+KLEELLVE
Sbjct: 61  HPILLEPSSTPPSILTAEEKSRIEFNKALARARRNLKLCSDKIAKCEDVGCVKLEELLVE 120

Query: 128 ETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQ 187
           ETW   LPGEF+KPYA NL KFV++EI  SG PIYPP  LIFNALN+TPFDRVKVVI+GQ
Sbjct: 121 ETWLGKLPGEFQKPYAKNLFKFVESEI-QSGFPIYPPQHLIFNALNTTPFDRVKVVIIGQ 180

Query: 188 DPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           DPYHGPGQAMGLSFSVPEGVK+PSSL+NI+KEL++DLGCSIPSHGNL +WAVQ +L
Sbjct: 181 DPYHGPGQAMGLSFSVPEGVKVPSSLINIYKELQNDLGCSIPSHGNLERWAVQGVL 235

[Close]
BLAST of MELO3C026796 vs. TAIR10
Match: AT3G18630.1 (AT3G18630.1 uracil dna glycosylase)

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 129/228 (56.58%), Postives = 157/228 (68.86%), Query Frame = 1 

Query: 9   SSKTRTLIDIFQPALSKRLKTSQT---------------LKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK S +               L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  TDMSASQISRMETNKWMARSKRNLKICSDRVSKW--ENGC-MKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL +CS+RV+K   E  C + L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FEKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQ +L
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVL 228

[Close]
BLAST of MELO3C026796 vs. NCBI nr
Match: gi|659130542|ref|XP_008465227.1| (PREDICTED: uracil-DNA glycosylase isoform X2 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 1 

Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQ +L
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVL 216

[Close]
BLAST of MELO3C026796 vs. NCBI nr
Match: gi|659130540|ref|XP_008465225.1| (PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 1 

Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQ +L
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVL 216

[Close]
BLAST of MELO3C026796 vs. NCBI nr
Match: gi|449445338|ref|XP_004140430.1| (PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 2.4e-114
Identity = 207/216 (95.83%), Postives = 213/216 (98.61%), Query Frame = 1 

Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQ +L
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVL 216

[Close]
BLAST of MELO3C026796 vs. NCBI nr
Match: gi|778701920|ref|XP_011655110.1| (PREDICTED: uracil-DNA glycosylase isoform X2 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 2.4e-114
Identity = 207/216 (95.83%), Postives = 213/216 (98.61%), Query Frame = 1 

Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQVLL 217
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQ +L
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVL 216

[Close]
BLAST of MELO3C026796 vs. NCBI nr
Match: gi|1009106111|ref|XP_015870160.1| (PREDICTED: uracil-DNA glycosylase, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 269.6 bits (688), Expect = 5.3e-69
Identity = 149/247 (60.32%), Postives = 179/247 (72.47%), Query Frame = 1 

Query: 1   MASSSASLSSKTRTLIDIFQP-----ALSKRLKTS-----------------QTLKTLAT 60
           MAS ++S     +TL DIF+P     + +KRLK S                 Q + +L+ 
Sbjct: 1   MASRASSEIKTRKTLSDIFRPQHPAASAAKRLKPSSLGFSGSKQPPNPIHHCQGVASLSK 60

Query: 61  NDDKC-------DSDLTLASSSTDMSASQISRMETNKWMARSKRNLKICSDRVSKWENGC 120
            DD         DS+ + +SSS  ++  QISRME ++ +A++KRN K CS RVSK + G 
Sbjct: 61  CDDDGGVLPIPNDSESSRSSSSA-LTDQQISRMEFHRLLAKAKRNQKTCSGRVSKCKGGS 120

Query: 121 --MKLEELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTP 180
             +KL+ELLVE+TW EALPGEFEKPYA+NLCKFV++EIC  G+PIYPPP LIFNALNST 
Sbjct: 121 GYVKLQELLVEDTWLEALPGEFEKPYAMNLCKFVESEICGGGIPIYPPPHLIFNALNSTS 180

Query: 181 FDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGK 217
           FDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSL+NIFKEL+ DLGCSIPSHGNL K
Sbjct: 181 FDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLVNIFKELEQDLGCSIPSHGNLEK 240

The following BLAST results are available for this feature:
BLAST of MELO3C026796 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UNG_ARATH2.7e-6056.58Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana GN=UNG PE=1 SV=1[more]
UNG_AZOVD9.5e-3460.66Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=... [more]
UNG_PSEPF1.4e-3259.02Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ung PE=3 SV=... [more]
UNG_CAMHC2.3e-3257.48Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568... [more]
UNG_PSEF52.3e-3258.20Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) G... [more]
BLAST of MELO3C026796 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMG3_CUCSA1.7e-11495.83Uracil-DNA glycosylase OS=Cucumis sativus GN=Csa_5G289610 PE=3 SV=1[more]
W9RJ98_9ROSA1.5e-6561.23Uracil-DNA glycosylase OS=Morus notabilis GN=L484_009862 PE=3 SV=1[more]
M5XNR7_PRUPE1.5e-6563.51Uracil-DNA glycosylase OS=Prunus persica GN=PRUPE_ppa022483mg PE=3 SV=1[more]
B9HY10_POPTR1.6e-6461.14Uracil-DNA glycosylase OS=Populus trichocarpa GN=POPTR_0010s17670g PE=3 SV=2[more]
A0A068UAV2_COFCA3.6e-6457.20Uracil-DNA glycosylase OS=Coffea canephora GN=GSCOC_T00020450001 PE=3 SV=1[more]
BLAST of MELO3C026796 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18630.11.5e-6156.58 uracil dna glycosylase[more]
BLAST of MELO3C026796 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130542|ref|XP_008465227.1|1.4e-11799.07PREDICTED: uracil-DNA glycosylase isoform X2 [Cucumis melo][more]
gi|659130540|ref|XP_008465225.1|1.4e-11799.07PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis melo][more]
gi|449445338|ref|XP_004140430.1|2.4e-11495.83PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis sativus][more]
gi|778701920|ref|XP_011655110.1|2.4e-11495.83PREDICTED: uracil-DNA glycosylase isoform X2 [Cucumis sativus][more]
gi|1009106111|ref|XP_015870160.1|5.3e-6960.32PREDICTED: uracil-DNA glycosylase, mitochondrial [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002043UDG_fam1
IPR005122Uracil-DNA_glycosylase-like
IPR018085Ura-DNA_Glyclase_AS
Vocabulary: Molecular Function
TermDefinition
GO:0004844uracil DNA N-glycosylase activity
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006281 DNA repair
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
molecular_function GO:0004844 uracil DNA N-glycosylase activity
molecular_function GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026796T1MELO3C026796T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002043Uracil-DNA glycosylasePANTHERPTHR11264URACIL-DNA GLYCOSYLASEcoord: 13..216
score: 1.1E
IPR005122Uracil-DNA glycosylase-likeGENE3DG3DSA:3.40.470.10coord: 91..216
score: 4.0
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 151..196
score: 5.
IPR005122Uracil-DNA glycosylase-likeunknownSSF52141Uracil-DNA glycosylase-likecoord: 98..215
score: 2.83
IPR018085Uracil-DNA glycosylase, active sitePROSITEPS00130U_DNA_GLYCOSYLASEcoord: 154..163
scor
NoneNo IPR availablePANTHERPTHR11264:SF9SUBFAMILY NOT NAMEDcoord: 13..216
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C026796CSPI05G12490Wild cucumber (PI 183967)cpimeB372
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026796Bottle gourd (USVL1VR-Ls)lsimeB283