MELO3C026687.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C026687.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMultidrug resistance 3
Locationchr10 : 26323413 .. 26323730 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAAGAAGGCTATGGATGGTCCCCAATTGAGGCTCCTCTAGATGTCCAGAAAGAGGACCACTTGAGGCATTTCGACAACTCTGTTGATGCCGTCTCTTTTGGGTTTGTTGCTACTGCCATTCTCGTCTCAATGTTTTTGCTCATGGCCATCTTTGAAAGGTTTTTGCGACCTACTCCCACTGCTTTCTCTCACGCCGGAGGTTGGACCCACCTTGACCCTAAGGCTCAGATGTGGTTTGCTGGAAAGCTTGCTCACCCATCACCCAAAGTGAGTTCTCCCAATTTGTTTCTCATCGGTTTTTGTTCTCTCTGA

mRNA sequence

ATGGGTGAAGAAGGCTATGGATGGTCCCCAATTGAGGCTCCTCTAGATGTCCAGAAAGAGGACCACTTGAGGCATTTCGACAACTCTGTTGATGCCGTCTCTTTTGGGTTTGTTGCTACTGCCATTCTCGTCTCAATGTTTTTGCTCATGGCCATCTTTGAAAGGTTTTTGCGACCTACTCCCACTGCTTTCTCTCACGCCGGAGGTTGGACCCACCTTGACCCTAAGGCTCAGATGTGGTTTGCTGGAAAGCTTGCTCACCCATCACCCAAAGTGAGTTCTCCCAATTTGTTTCTCATCGGTTTTTGTTCTCTCTGA

Coding sequence (CDS)

ATGGGTGAAGAAGGCTATGGATGGTCCCCAATTGAGGCTCCTCTAGATGTCCAGAAAGAGGACCACTTGAGGCATTTCGACAACTCTGTTGATGCCGTCTCTTTTGGGTTTGTTGCTACTGCCATTCTCGTCTCAATGTTTTTGCTCATGGCCATCTTTGAAAGGTTTTTGCGACCTACTCCCACTGCTTTCTCTCACGCCGGAGGTTGGACCCACCTTGACCCTAAGGCTCAGATGTGGTTTGCTGGAAAGCTTGCTCACCCATCACCCAAAGTGAGTTCTCCCAATTTGTTTCTCATCGGTTTTTGTTCTCTCTGA

Protein sequence

MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVSSPNLFLIGFCSL
Homology
[Close]
BLAST of MELO3C026687.2 vs. NCBI nr
Match: XP_008465061.1 (PREDICTED: uncharacterized protein LOC103502769 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 3.6e-47
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
          MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVSS 95
          PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPK+ +
Sbjct: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKIDT 94

[Close]
BLAST of MELO3C026687.2 vs. NCBI nr
Match: XP_004146588.1 (PREDICTED: uncharacterized protein LOC101205831 [Cucumis sativus] >KGN64640.1 hypothetical protein Csa_1G073000 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 7.8e-42
Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
          MGEEGYGWSPI APLDVQKEDH RHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1  MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
          PTAFSHAGG THLDP+AQM FAGKLAHPSPK++
Sbjct: 61 PTAFSHAGGRTHLDPEAQMGFAGKLAHPSPKMT 93

[Close]
BLAST of MELO3C026687.2 vs. NCBI nr
Match: XP_008442165.1 (PREDICTED: uncharacterized protein LOC103486098 [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-41
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
          MGEEGYGWSPI APLDVQKEDH RHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1  MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
          PTAFSHAGG THLDP+AQM F GKLAHPSPK++
Sbjct: 61 PTAFSHAGGRTHLDPEAQMGFTGKLAHPSPKMT 93

[Close]
BLAST of MELO3C026687.2 vs. NCBI nr
Match: XP_022927571.1 (uncharacterized protein LOC111434363 [Cucurbita moschata])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-39
Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1   MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
           MGEEGYGWSP  APLDVQ+EDH RHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 15  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 74

Query: 61  PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
           PTAFSHAG  THLDP+AQM FAGKL HPSPK++
Sbjct: 75  PTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMT 107

[Close]
BLAST of MELO3C026687.2 vs. NCBI nr
Match: XP_023001755.1 (uncharacterized protein LOC111495798 [Cucurbita maxima])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-39
Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1   MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
           MGEEGYGWSP  APLDVQ+EDH RHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 15  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 74

Query: 61  PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
           PTAFSHAG  THLDP+AQM FAGKL HPSPK++
Sbjct: 75  PTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMT 107

[Close]
BLAST of MELO3C026687.2 vs. TAIR10
Match: AT1G11120.1 (unknown protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-12
Identity = 33/52 (63.46%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 8  WSPIEAPLDVQKEDHLR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLR 59
          W PI AP+++++E+  +  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R
Sbjct: 15 WPPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIR 66

[Close]
BLAST of MELO3C026687.2 vs. TAIR10
Match: AT1G09812.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 9.0e-08
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0 

Query: 8  WSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAF 65
          WS I +P +   E   R    S++A+SFGFVATAIL+SMFL+MAIFE   RP  ++F
Sbjct: 7  WS-IYSPREGDSEGPWRS-STSMNAISFGFVATAILISMFLIMAIFEHLFRPENSSF 61

[Close]
BLAST of MELO3C026687.2 vs. TAIR10
Match: AT4G28170.1 (unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 14 PLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFL--RPTPT 63
          PL   +E   R F++SV+AV FG VAT +L+++FLL+A FERF+  +PTP+
Sbjct: 46 PLAADEEGQGR-FESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPTPS 95

[Close]
BLAST of MELO3C026687.2 vs. TAIR10
Match: AT1G58007.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 3.5e-04
Identity = 19/31 (61.29%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 28 NSVDAVSFGFVATAILVSMFLLMAIFERFLR 59
          +S++A+SFGFVATAIL+ MF++MAI E   R
Sbjct: 21 SSMNAISFGFVATAILILMFIIMAILEHLFR 51

[Close]
BLAST of MELO3C026687.2 vs. TrEMBL
Match: tr|A0A1S3CNE1|A0A1S3CNE1_CUCME (uncharacterized protein LOC103502769 OS=Cucumis melo OX=3656 GN=LOC103502769 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-47
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
          MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVSS 95
          PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPK+ +
Sbjct: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKIDT 94

[Close]
BLAST of MELO3C026687.2 vs. TrEMBL
Match: tr|A0A0A0LRU5|A0A0A0LRU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073000 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.2e-42
Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
          MGEEGYGWSPI APLDVQKEDH RHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1  MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
          PTAFSHAGG THLDP+AQM FAGKLAHPSPK++
Sbjct: 61 PTAFSHAGGRTHLDPEAQMGFAGKLAHPSPKMT 93

[Close]
BLAST of MELO3C026687.2 vs. TrEMBL
Match: tr|A0A1S3B529|A0A1S3B529_CUCME (uncharacterized protein LOC103486098 OS=Cucumis melo OX=3656 GN=LOC103486098 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
          MGEEGYGWSPI APLDVQKEDH RHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1  MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
          PTAFSHAGG THLDP+AQM F GKLAHPSPK++
Sbjct: 61 PTAFSHAGGRTHLDPEAQMGFTGKLAHPSPKMT 93

[Close]
BLAST of MELO3C026687.2 vs. TrEMBL
Match: tr|A0A2I4DZ71|A0A2I4DZ71_9ROSI (uncharacterized protein LOC108984832 OS=Juglans regia OX=51240 GN=LOC108984832 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.2e-28
Identity = 65/94 (69.15%), Postives = 77/94 (81.91%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPL-DVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP 60
          M  EGY W+PI +PL +VQ+E+H RHFDNSV+AVSFGFVATAIL+SMFL+MAIFERFLRP
Sbjct: 1  MVSEGYAWAPIGSPLNNVQREEHWRHFDNSVNAVSFGFVATAILISMFLVMAIFERFLRP 60

Query: 61 TPTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
          T TA S +GG  H D +AQM F  KL HPSPK++
Sbjct: 61 TSTALSPSGGHNHRDLEAQMGFNAKLGHPSPKMT 94

[Close]
BLAST of MELO3C026687.2 vs. TrEMBL
Match: tr|A0A1U8AZY4|A0A1U8AZY4_NELNU (uncharacterized protein LOC104605633 OS=Nelumbo nucifera OX=4432 GN=LOC104605633 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.7e-27
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0 

Query: 1  MGEEGYGWSPIEAPLDVQKEDHLRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60
          MGE+ +G  P  APL+VQ+E+H RHFDNSV+AVSFGFVATAIL+SMFL MAIFERFLRP 
Sbjct: 1  MGEDNWGMQPSGAPLNVQREEHWRHFDNSVNAVSFGFVATAILISMFLAMAIFERFLRPR 60

Query: 61 PTAFSHAGGWTHLDPKAQMWFAGKLAHPSPKVS 94
           TA + +G   H D +AQM F GKL HPSPK+S
Sbjct: 61 STALTPSGARNHSDLEAQMTFNGKLGHPSPKMS 93

The following BLAST results are available for this feature:
BLAST of MELO3C026687.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465061.13.6e-4796.81PREDICTED: uncharacterized protein LOC103502769 [Cucumis melo][more]
XP_004146588.17.8e-4292.47PREDICTED: uncharacterized protein LOC101205831 [Cucumis sativus] >KGN64640.1 hy... [more]
XP_008442165.12.3e-4191.40PREDICTED: uncharacterized protein LOC103486098 [Cucumis melo][more]
XP_022927571.11.6e-3988.17uncharacterized protein LOC111434363 [Cucurbita moschata][more]
XP_023001755.11.6e-3988.17uncharacterized protein LOC111495798 [Cucurbita maxima][more]
BLAST of MELO3C026687.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11120.13.5e-1263.46unknown protein[more]
AT1G09812.19.0e-0852.63unknown protein[more]
AT4G28170.11.7e-0650.98unknown protein[more]
AT1G58007.13.5e-0461.29unknown protein[more]
BLAST of MELO3C026687.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C026687.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CNE1|A0A1S3CNE1_CUCME2.4e-4796.81uncharacterized protein LOC103502769 OS=Cucumis melo OX=3656 GN=LOC103502769 PE=... [more]
tr|A0A0A0LRU5|A0A0A0LRU5_CUCSA5.2e-4292.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073000 PE=4 SV=1[more]
tr|A0A1S3B529|A0A1S3B529_CUCME1.5e-4191.40uncharacterized protein LOC103486098 OS=Cucumis melo OX=3656 GN=LOC103486098 PE=... [more]
tr|A0A2I4DZ71|A0A2I4DZ71_9ROSI7.2e-2869.15uncharacterized protein LOC108984832 OS=Juglans regia OX=51240 GN=LOC108984832 P... [more]
tr|A0A1U8AZY4|A0A1U8AZY4_NELNU4.7e-2767.74uncharacterized protein LOC104605633 OS=Nelumbo nucifera OX=4432 GN=LOC104605633... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026687.2.1MELO3C026687.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33728:SF1SUBFAMILY NOT NAMEDcoord: 5..93
NoneNo IPR availablePANTHERPTHR33728FAMILY NOT NAMEDcoord: 5..93

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026687.2Cucumber (Gy14) v2cgybmedB315
MELO3C026687.2Wild cucumber (PI 183967)cpimedB358
MELO3C026687.2Cucumber (Gy14) v1cgymedB542
MELO3C026687.2Cucumber (Chinese Long) v2cumedB354
MELO3C026687.2Cucumber (Chinese Long) v3cucmedB368