MELO3C026654.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026654.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	BAG-associated GRAM protein 1
Location	chr02 : 17940211 .. 17940989 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACGAAGGACTCAACATGCATTTATCAATCCTGCTGTAACAATTATTCTTCGCATGGGTGTTGGTGGGCATGGTGTACCTCCATTGGGAAGTCCTGATGGTTAGTACCTTTGTATACTTGATAGAAACCTCATTATGTCACAAAATATGAGTTGAAATTACATATTTCAAGCTTGTCATTGTCAAATTTCCTTGATGAAATTGTTGTTTCTAATTTGTAAGCTTCCTGGTGGTGGTTGGATTGTGATCTGCGGAAATATTATTAGAAGTACATGAAATGTGTCTTTTCGTTTGTAAATCTTGATTATGCACCTAGATACTTCGTTATCTTTCCTCACTTTCTCATTCCATTTTCAGGTAGGGTCAGATATAAATTTGCATCATTTTGGAATAGGAACCATATGGTTAGAGCTTTACAGCACTCAGTGAATAACTTCCGTGAAATGCTGGAAGCTGAGAAGAAGGCATGTTATTCAGACCTTAGGTTTTTCTTTTCGTTGATATTTCTTGTTGTTTGTGTTTTATTTATTTATTTACTTATTTATTATTATTTGTTATAAGAATGCCCTTTTATTTGTTGTTAGGAAGACTTCAAACTTGGAAATTTACTTTGTTGATCTAATTCTAATACTGTATTATGATCCTTACTCAAATGATGGAAAATTTTTGCAACTTTCTATGAGGTTTGTTTTTGTTTGTTAACTGTTGTTCTATTCTGCAGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCATATGGAGGGGACTGA

mRNA sequence

ATACGAAGGACTCAACATGCATTTATCAATCCTGCTGTAACAATTATTCTTCGCATGGGTGTTGGTGGGCATGGTGTACCTCCATTGGGAAGTCCTGATGGTAGGGTCAGATATAAATTTGCATCATTTTGGAATAGGAACCATATGGTTAGAGCTTTACAGCACTCAGTGAATAACTTCCGTGAAATGCTGGAAGCTGAGAAGAAGGCATGTTATTCAGACCTTAGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCATATGGAGGGGACTGA

Coding sequence (CDS)

ATGGGTGTTGGTGGGCATGGTGTACCTCCATTGGGAAGTCCTGATGGTAGGGTCAGATATAAATTTGCATCATTTTGGAATAGGAACCATATGGTTAGAGCTTTACAGCACTCAGTGAATAACTTCCGTGAAATGCTGGAAGCTGAGAAGAAGGCATGTTATTCAGACCTTAGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCATATGGAGGGGACTGA

Protein sequence

MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKKACYSDLRKERGKKQQTWRVFSYGGD

Homology

[Close]

BLAST of MELO3C026654.2 vs. NCBI nr
Match: XP_016903295.1 (PREDICTED: BAG-associated GRAM protein 1-like isoform X1 [Cucumis melo] >XP_016903296.1 PREDICTED: BAG-associated GRAM protein 1-like isoform X1 [Cucumis melo] >XP_016903297.1 PREDICTED: BAG-associated GRAM protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1   MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
           MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 59  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 109

[Close]

BLAST of MELO3C026654.2 vs. NCBI nr
Match: XP_016903298.1 (PREDICTED: BAG-associated GRAM protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
          MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 49 MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 99

[Close]

BLAST of MELO3C026654.2 vs. NCBI nr
Match: XP_016903299.1 (PREDICTED: BAG-associated GRAM protein 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
          MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 42 MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 92

[Close]

BLAST of MELO3C026654.2 vs. NCBI nr
Match: XP_016903300.1 (PREDICTED: BAG-associated GRAM protein 1-like isoform X4 [Cucumis melo] >XP_016903301.1 PREDICTED: BAG-associated GRAM protein 1-like isoform X4 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
          MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 38 MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 88

[Close]

BLAST of MELO3C026654.2 vs. NCBI nr
Match: XP_004152131.1 (PREDICTED: C2 and GRAM domain-containing protein At1g03370 [Cucumis sativus] >KGN53020.1 hypothetical protein Csa_4G011670 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-19
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1   MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
           MG GGHGVPPLGSPDGRVRYKFASFWNRNH+VRALQ SVNNFREMLEAEKK
Sbjct: 318 MGAGGHGVPPLGSPDGRVRYKFASFWNRNHVVRALQRSVNNFREMLEAEKK 368

[Close]

BLAST of MELO3C026654.2 vs. TAIR10
Match: AT3G59660.1 (C2 domain-containing protein / GRAM domain-containing protein)

HSP 1 Score: 92.4 bits (228), Expect = 1.3e-19
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 1   MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
           MG GGHGVPPLG+PDGRVRYKFASFWNRNH ++ALQ +VNN+  MLE EKK
Sbjct: 309 MGAGGHGVPPLGTPDGRVRYKFASFWNRNHTLKALQRAVNNYHAMLEVEKK 359

[Close]

BLAST of MELO3C026654.2 vs. Swiss-Prot
Match: sp|Q8W4D4|BAGP1_ARATH (BAG-associated GRAM protein 1 OS=Arabidopsis thaliana OX=3702 GN=BAGP1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.3e-18
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 1   MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
           MG GGHGVPPLG+PDGRVRYKFASFWNRNH ++ALQ +VNN+  MLE EKK
Sbjct: 309 MGAGGHGVPPLGTPDGRVRYKFASFWNRNHTLKALQRAVNNYHAMLEVEKK 359

[Close]

BLAST of MELO3C026654.2 vs. TrEMBL
Match: tr|A0A1S4E4Z2|A0A1S4E4Z2_CUCME (BAG-associated GRAM protein 1-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103502745 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
          MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 38 MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 88

[Close]

BLAST of MELO3C026654.2 vs. TrEMBL
Match: tr|A0A1S4E5P1|A0A1S4E5P1_CUCME (BAG-associated GRAM protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502745 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1   MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
           MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 59  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 109

[Close]

BLAST of MELO3C026654.2 vs. TrEMBL
Match: tr|A0A1S4E4Y9|A0A1S4E4Y9_CUCME (BAG-associated GRAM protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502745 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
          MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 49 MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 99

[Close]

BLAST of MELO3C026654.2 vs. TrEMBL
Match: tr|A0A1S4E4Z6|A0A1S4E4Z6_CUCME (BAG-associated GRAM protein 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502745 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
          MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK
Sbjct: 42 MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 92

[Close]

BLAST of MELO3C026654.2 vs. TrEMBL
Match: tr|A0A1S3BXU5|A0A1S3BXU5_CUCME (BAG-associated GRAM protein 1 OS=Cucumis melo OX=3656 GN=LOC103494589 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.0e-20
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1   MGVGGHGVPPLGSPDGRVRYKFASFWNRNHMVRALQHSVNNFREMLEAEKK 52
           MG GGHGVPPLGSPDGRVRYKFASFWNRNH+VRALQ SVNNFREMLEAEKK
Sbjct: 318 MGAGGHGVPPLGSPDGRVRYKFASFWNRNHVVRALQRSVNNFREMLEAEKK 368

The following BLAST results are available for this feature:

BLAST of MELO3C026654.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903295.1	1.9e-21	100.00	PREDICTED: BAG-associated GRAM protein 1-like isoform X1 [Cucumis melo] >XP_0169...	[more]
XP_016903298.1	1.9e-21	100.00	PREDICTED: BAG-associated GRAM protein 1-like isoform X2 [Cucumis melo]	[more]
XP_016903299.1	1.9e-21	100.00	PREDICTED: BAG-associated GRAM protein 1-like isoform X3 [Cucumis melo]	[more]
XP_016903300.1	1.9e-21	100.00	PREDICTED: BAG-associated GRAM protein 1-like isoform X4 [Cucumis melo] >XP_0169...	[more]
XP_004152131.1	1.4e-19	94.12	PREDICTED: C2 and GRAM domain-containing protein At1g03370 [Cucumis sativus] >KG...	[more]

BLAST of MELO3C026654.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59660.1	1.3e-19	78.43	C2 domain-containing protein / GRAM domain-containing protein	[more]

BLAST of MELO3C026654.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W4D4\|BAGP1_ARATH	2.3e-18	78.43	BAG-associated GRAM protein 1 OS=Arabidopsis thaliana OX=3702 GN=BAGP1 PE=1 SV=1	[more]

BLAST of MELO3C026654.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E4Z2\|A0A1S4E4Z2_CUCME	1.3e-21	100.00	BAG-associated GRAM protein 1-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A1S4E5P1\|A0A1S4E5P1_CUCME	1.3e-21	100.00	BAG-associated GRAM protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A1S4E4Y9\|A0A1S4E4Y9_CUCME	1.3e-21	100.00	BAG-associated GRAM protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A1S4E4Z6\|A0A1S4E4Z6_CUCME	1.3e-21	100.00	BAG-associated GRAM protein 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A1S3BXU5\|A0A1S3BXU5_CUCME	9.0e-20	94.12	BAG-associated GRAM protein 1 OS=Cucumis melo OX=3656 GN=LOC103494589 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026654.2.1	MELO3C026654.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23319	UNCHARACTERIZED	coord: 2..59
None	No IPR available	PANTHER	PTHR23319:SF17	BAG-ASSOCIATED GRAM PROTEIN 1	coord: 2..59

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026654.2	Cucumber (Chinese Long) v3	cucmedB054
MELO3C026654.2	Cucumber (Chinese Long) v3	cucmedB110
MELO3C026654.2	Watermelon (97103) v2	medwmbB225
MELO3C026654.2	Watermelon (97103) v2	medwmbB251
MELO3C026654.2	Wax gourd	medwgoB272
MELO3C026654.2	Wax gourd	medwgoB290
MELO3C026654.2	Wax gourd	medwgoB316
MELO3C026654.2	Cucumber (Gy14) v2	cgybmedB047
MELO3C026654.2	Cucumber (Gy14) v2	cgybmedB092
MELO3C026654.2	Cucumber (Gy14) v1	cgymedB210
MELO3C026654.2	Cucumber (Gy14) v1	cgymedB485
MELO3C026654.2	Cucurbita maxima (Rimu)	cmamedB060
MELO3C026654.2	Cucurbita maxima (Rimu)	cmamedB131
MELO3C026654.2	Cucurbita maxima (Rimu)	cmamedB164
MELO3C026654.2	Cucurbita maxima (Rimu)	cmamedB811
MELO3C026654.2	Cucurbita moschata (Rifu)	cmomedB052
MELO3C026654.2	Cucurbita moschata (Rifu)	cmomedB105
MELO3C026654.2	Cucurbita moschata (Rifu)	cmomedB119
MELO3C026654.2	Cucurbita moschata (Rifu)	cmomedB154
MELO3C026654.2	Cucurbita moschata (Rifu)	cmomedB806
MELO3C026654.2	Cucurbita pepo (Zucchini)	cpemedB104
MELO3C026654.2	Cucurbita pepo (Zucchini)	cpemedB392
MELO3C026654.2	Cucurbita pepo (Zucchini)	cpemedB728
MELO3C026654.2	Cucurbita pepo (Zucchini)	cpemedB889
MELO3C026654.2	Wild cucumber (PI 183967)	cpimedB054
MELO3C026654.2	Wild cucumber (PI 183967)	cpimedB105
MELO3C026654.2	Cucumber (Chinese Long) v2	cumedB051
MELO3C026654.2	Cucumber (Chinese Long) v2	cumedB105
MELO3C026654.2	Melon (DHL92) v3.6.1	medmedB104
MELO3C026654.2	Bottle gourd (USVL1VR-Ls)	lsimedB108
MELO3C026654.2	Bottle gourd (USVL1VR-Ls)	lsimedB425
MELO3C026654.2	Watermelon (Charleston Gray)	medwcgB221
MELO3C026654.2	Watermelon (Charleston Gray)	medwcgB249
MELO3C026654.2	Watermelon (97103) v1	medwmB277
MELO3C026654.2	Watermelon (97103) v1	medwmB288
MELO3C026654.2	Silver-seed gourd	carmedB0036
MELO3C026654.2	Silver-seed gourd	carmedB0039
MELO3C026654.2	Silver-seed gourd	carmedB0135
MELO3C026654.2	Silver-seed gourd	carmedB0579