MELO3C026565.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C026565.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionKinase family with ARM repeat domain-containing protein
Locationchr10 : 8293867 .. 8294142 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAATGATAAGTTTTCACTGGCAGCTATTGGAAACATTTTAGTTCTTTCAGGTTCAAGAAGTACAGCTCGACTAGCTAAAGAGGAAGACGATCTTTGGGGTTCCATAGCTGCCCTTGATCCAAGAACTGTCTCAAAATTATTAAACGTAAAATCAAGTGCGCCTATGACTCGAGCCAAGCCATTGTCAGCTGGTAGGGGAAGAGGAAGCAAAGCAGCTGCTCCAAAATTAGGGGCACAAAGGACTAATCGAACATCGTTTACTAGTATGTGA

mRNA sequence

ATGCATAATGATAAGTTTTCACTGGCAGCTATTGGAAACATTTTAGTTCTTTCAGGTTCAAGAAGTACAGCTCGACTAGCTAAAGAGGAAGACGATCTTTGGGGTTCCATAGCTGCCCTTGATCCAAGAACTGTCTCAAAATTATTAAACGTAAAATCAAGTGCGCCTATGACTCGAGCCAAGCCATTGTCAGCTGGTAGGGGAAGAGGAAGCAAAGCAGCTGCTCCAAAATTAGGGGCACAAAGGACTAATCGAACATCGTTTACTAGTATGTGA

Coding sequence (CDS)

ATGCATAATGATAAGTTTTCACTGGCAGCTATTGGAAACATTTTAGTTCTTTCAGGTTCAAGAAGTACAGCTCGACTAGCTAAAGAGGAAGACGATCTTTGGGGTTCCATAGCTGCCCTTGATCCAAGAACTGTCTCAAAATTATTAAACGTAAAATCAAGTGCGCCTATGACTCGAGCCAAGCCATTGTCAGCTGGTAGGGGAAGAGGAAGCAAAGCAGCTGCTCCAAAATTAGGGGCACAAAGGACTAATCGAACATCGTTTACTAGTATGTGA

Protein sequence

MHNDKFSLAAIGNILVLSGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPMTRAKPLSAGRGRGSKAAAPKLGAQRTNRTSFTSM
Homology
[Close]
BLAST of MELO3C026565.2 vs. NCBI nr
Match: XP_008460276.1 (PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis melo] >XP_008460277.1 PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis melo] >XP_008460278.1 PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-14
Identity = 55/91 (60.44%), Postives = 58/91 (63.74%), Query Frame = 0 

Query: 16  VLSGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAP---------------MTRA 75
           +LSGSRSTAR AKE+DDLWGSIAA  PR VSK LNVKSSAP                   
Sbjct: 707 ILSGSRSTARPAKEDDDLWGSIAAPAPRAVSKPLNVKSSAPXXXXXXXXXXXXXXXXXXX 766

Query: 76  KPLSAGRGRGSKAAAPKLGAQRTNRTSFTSM 92
                GRGRG+KAA PKLGAQR NRTS T M
Sbjct: 767 XXXXXGRGRGNKAAPPKLGAQRINRTSSTGM 797

[Close]
BLAST of MELO3C026565.2 vs. NCBI nr
Match: XP_004144420.1 (PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis sativus] >XP_011651702.1 PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis sativus] >XP_011651703.1 PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13
Identity = 56/91 (61.54%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 16  VLSGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAP---------------MTRA 75
           +LSGSRS AR AKE+DDLWGSIAA  PRTVSK LNVKSSAP                   
Sbjct: 707 ILSGSRS-ARPAKEDDDLWGSIAAPAPRTVSKPLNVKSSAPXXXXXXXXXXXXXXXXXXX 766

Query: 76  KPLSAGRGRGSKAAAPKLGAQRTNRTSFTSM 92
                GRGRGSKAAAPKLGAQR NRTS + M
Sbjct: 767 XXXXXGRGRGSKAAAPKLGAQRINRTSSSGM 796

[Close]
BLAST of MELO3C026565.2 vs. NCBI nr
Match: XP_008460279.1 (PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12
Identity = 52/87 (59.77%), Postives = 54/87 (62.07%), Query Frame = 0 

Query: 20  SRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAP---------------MTRAKPLS 79
           SRSTAR AKE+DDLWGSIAA  PR VSK LNVKSSAP                       
Sbjct: 708 SRSTARPAKEDDDLWGSIAAPAPRAVSKPLNVKSSAPXXXXXXXXXXXXXXXXXXXXXXX 767

Query: 80  AGRGRGSKAAAPKLGAQRTNRTSFTSM 92
            GRGRG+KAA PKLGAQR NRTS T M
Sbjct: 768 XGRGRGNKAAPPKLGAQRINRTSSTGM 794

[Close]
BLAST of MELO3C026565.2 vs. NCBI nr
Match: XP_022937946.1 (probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucurbita moschata] >XP_022937947.1 probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 76.6 bits (187), Expect = 4.7e-11
Identity = 50/89 (56.18%), Postives = 53/89 (59.55%), Query Frame = 0 

Query: 18  SGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSA---------------PMTRAKP 77
           SGSRST R AKE+DDLWGSIAA  PRT SK L VK+S                       
Sbjct: 712 SGSRSTPRPAKEDDDLWGSIAAPAPRTGSKSLKVKASTXXXXXXXXXXXXXXXXXXXXXX 771

Query: 78  LSAGRGRGSKAAAPKLGAQRTNRTSFTSM 92
             AGRGRG+K AAPKLGAQR NRTS T M
Sbjct: 772 XXAGRGRGNKPAAPKLGAQRINRTSSTGM 800

[Close]
BLAST of MELO3C026565.2 vs. NCBI nr
Match: XP_022937948.1 (probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 76.6 bits (187), Expect = 4.7e-11
Identity = 50/89 (56.18%), Postives = 53/89 (59.55%), Query Frame = 0 

Query: 18  SGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSA---------------PMTRAKP 77
           SGSRST R AKE+DDLWGSIAA  PRT SK L VK+S                       
Sbjct: 709 SGSRSTPRPAKEDDDLWGSIAAPAPRTGSKSLKVKASTXXXXXXXXXXXXXXXXXXXXXX 768

Query: 78  LSAGRGRGSKAAAPKLGAQRTNRTSFTSM 92
             AGRGRG+K AAPKLGAQR NRTS T M
Sbjct: 769 XXAGRGRGNKPAAPKLGAQRINRTSSTGM 797

[Close]
BLAST of MELO3C026565.2 vs. TAIR10
Match: AT2G40730.1 (Protein kinase family protein with ARM repeat domain)

HSP 1 Score: 43.9 bits (102), Expect = 6.2e-05
Identity = 32/74 (43.24%), Postives = 36/74 (48.65%), Query Frame = 0 

Query: 29  EEDDLWGSIAALDPRTVSKLL---------------NVKSSAPMTRAKPLSAGRGRGSKA 88
           E+DDLWGSIAA  P T S+ L                              +GRGRG+K 
Sbjct: 722 EDDDLWGSIAAPPPATTSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGRGAKP 781

[Close]
BLAST of MELO3C026565.2 vs. TrEMBL
Match: tr|A0A1S3CCL0|A0A1S3CCL0_CUCME (probable inactive serine/threonine-protein kinase scy1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499151 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 55/91 (60.44%), Postives = 58/91 (63.74%), Query Frame = 0 

Query: 16  VLSGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAP---------------MTRA 75
           +LSGSRSTAR AKE+DDLWGSIAA  PR VSK LNVKSSAP                   
Sbjct: 707 ILSGSRSTARPAKEDDDLWGSIAAPAPRAVSKPLNVKSSAPXXXXXXXXXXXXXXXXXXX 766

Query: 76  KPLSAGRGRGSKAAAPKLGAQRTNRTSFTSM 92
                GRGRG+KAA PKLGAQR NRTS T M
Sbjct: 767 XXXXXGRGRGNKAAPPKLGAQRINRTSSTGM 797

[Close]
BLAST of MELO3C026565.2 vs. TrEMBL
Match: tr|A0A1S3CBP3|A0A1S3CBP3_CUCME (probable inactive serine/threonine-protein kinase scy1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499151 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-12
Identity = 52/87 (59.77%), Postives = 54/87 (62.07%), Query Frame = 0 

Query: 20  SRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAP---------------MTRAKPLS 79
           SRSTAR AKE+DDLWGSIAA  PR VSK LNVKSSAP                       
Sbjct: 708 SRSTARPAKEDDDLWGSIAAPAPRAVSKPLNVKSSAPXXXXXXXXXXXXXXXXXXXXXXX 767

Query: 80  AGRGRGSKAAAPKLGAQRTNRTSFTSM 92
            GRGRG+KAA PKLGAQR NRTS T M
Sbjct: 768 XGRGRGNKAAPPKLGAQRINRTSSTGM 794

[Close]
BLAST of MELO3C026565.2 vs. TrEMBL
Match: tr|A0A0A0LBV8|A0A0A0LBV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642700 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-09
Identity = 47/83 (56.63%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 20  SRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKS---------------SAPMTRAKPLS 79
           S  +AR AKE+DDLWGSIAA  PRTVSK LNVKS                          
Sbjct: 232 SSRSARPAKEDDDLWGSIAAPAPRTVSKPLNVKSXXXXXXXXXXXXXXXXXXXXXXXXXX 291

Query: 80  AGRGRGSKAAAPKLGAQRTNRTS 88
            GRGRGSKAAAPKLGAQR NRTS
Sbjct: 292 XGRGRGSKAAAPKLGAQRINRTS 314

[Close]
BLAST of MELO3C026565.2 vs. TrEMBL
Match: tr|A0A1S3V892|A0A1S3V892_VIGRR (N-terminal kinase-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106772581 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-09
Identity = 47/83 (56.63%), Postives = 54/83 (65.06%), Query Frame = 0 

Query: 20  SRSTARLAK-EEDDLWGSIAALDPRTVSKLLNVKS--------------SAPMTRAKPLS 79
           S+ST++L K E+DDLWGSIAA  P+T SK LN+KS                    AKPLS
Sbjct: 709 SKSTSKLRKDEDDDLWGSIAAPAPKT-SKSLNLKSXXXXXXXXXXXXXXXXXXXXAKPLS 768

Query: 80  AGRGRGSKAAAPKLGAQRTNRTS 88
           AGRGR +K AAPKLGAQR NRTS
Sbjct: 769 AGRGRSAKPAAPKLGAQRLNRTS 790

[Close]
BLAST of MELO3C026565.2 vs. TrEMBL
Match: tr|I1L6C2|I1L6C2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100789813 PE=4 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 8.5e-09
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 20  SRSTARLAK-EEDDLWGSIAALDPRTVSKLLNVKS--------------SAPMTRAKPLS 79
           S+ST +L K E+DDLWGSIAA  P+T ++ LN+KS                   +AKPLS
Sbjct: 709 SKSTPKLNKDEDDDLWGSIAAPAPKT-ARPLNLKSXXXXXXXXXXXXXXXXXXIKAKPLS 768

Query: 80  AGRGRGSKAAAPKLGAQRTNRTS 88
           AGRGRG+K AAPKLGAQR NRTS
Sbjct: 769 AGRGRGAKPAAPKLGAQRINRTS 790

The following BLAST results are available for this feature:
BLAST of MELO3C026565.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460276.12.1e-1460.44PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cu... [more]
XP_004144420.11.7e-1361.54PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cu... [more]
XP_008460279.11.9e-1259.77PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cu... [more]
XP_022937946.14.7e-1156.18probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucurbita mos... [more]
XP_022937948.14.7e-1156.18probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cucurbita mos... [more]
BLAST of MELO3C026565.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40730.16.2e-0543.24Protein kinase family protein with ARM repeat domain[more]
BLAST of MELO3C026565.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C026565.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CCL0|A0A1S3CCL0_CUCME1.4e-1460.44probable inactive serine/threonine-protein kinase scy1 isoform X1 OS=Cucumis mel... [more]
tr|A0A1S3CBP3|A0A1S3CBP3_CUCME1.3e-1259.77probable inactive serine/threonine-protein kinase scy1 isoform X2 OS=Cucumis mel... [more]
tr|A0A0A0LBV8|A0A0A0LBV8_CUCSA2.2e-0956.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642700 PE=4 SV=1[more]
tr|A0A1S3V892|A0A1S3V892_VIGRR6.5e-0956.63N-terminal kinase-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC10677... [more]
tr|I1L6C2|I1L6C2_SOYBN8.5e-0955.42Uncharacterized protein OS=Glycine max OX=3847 GN=100789813 PE=4 SV=2[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026565.2.1MELO3C026565.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..91

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026565.2Cucumber (Gy14) v2cgybmedB312
MELO3C026565.2Cucumber (Gy14) v1cgymedB285
MELO3C026565.2Cucurbita maxima (Rimu)cmamedB738
MELO3C026565.2Cucurbita maxima (Rimu)cmamedB741
MELO3C026565.2Cucurbita moschata (Rifu)cmomedB733
MELO3C026565.2Cucurbita moschata (Rifu)cmomedB736
MELO3C026565.2Cucurbita pepo (Zucchini)cpemedB436
MELO3C026565.2Cucurbita pepo (Zucchini)cpemedB440
MELO3C026565.2Wild cucumber (PI 183967)cpimedB352
MELO3C026565.2Cucumber (Chinese Long) v2cumedB350
MELO3C026565.2Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C026565.2Watermelon (Charleston Gray)medwcgB064
MELO3C026565.2Watermelon (97103) v1medwmB057
MELO3C026565.2Silver-seed gourdcarmedB0091
MELO3C026565.2Silver-seed gourdcarmedB0670
MELO3C026565.2Cucumber (Chinese Long) v3cucmedB370
MELO3C026565.2Cucumber (Chinese Long) v3cucmedB362
MELO3C026565.2Watermelon (97103) v2medwmbB061
MELO3C026565.2Wax gourdmedwgoB078
MELO3C026565.2Wax gourdmedwgoB083