MELO3C026565 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026565
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionChorismate synthase
Locationchr10 : 7838521 .. 7838796 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAATGATAAGTTTTCACTGGCAGCTATTGGAAACATTTTAGTTCTTTCAGGTTCAAGAAGTACAGCTCGACTAGCTAAAGAGGAAGACGATCTTTGGGGTTCCATAGCTGCCCTTGATCCAAGAACTGTCTCAAAATTATTAAACGTAAAATCAAGTGCGCCTATGACTCGAGCCAAGCCATTGTCAGCTGGTAGGGGAAGAGGAAGCAAAGCAGCTGCTCCAAAATTAGGGGCACAAAGGACTAATCGAACATCGTTTACTAGTATGTGA

mRNA sequence

ATGCATAATGATAAGTTTTCACTGGCAGCTATTGGAAACATTTTAGTTCTTTCAGGTTCAAGAAGTACAGCTCGACTAGCTAAAGAGGAAGACGATCTTTGGGGTTCCATAGCTGCCCTTGATCCAAGAACTGTCTCAAAATTATTAAACGTAAAATCAAGTGCGCCTATGACTCGAGCCAAGCCATTGTCAGCTGGTAGGGGAAGAGGAAGCAAAGCAGCTGCTCCAAAATTAGGGGCACAAAGGACTAATCGAACATCGTTTACTAGTATGTGA

Coding sequence (CDS)

ATGCATAATGATAAGTTTTCACTGGCAGCTATTGGAAACATTTTAGTTCTTTCAGGTTCAAGAAGTACAGCTCGACTAGCTAAAGAGGAAGACGATCTTTGGGGTTCCATAGCTGCCCTTGATCCAAGAACTGTCTCAAAATTATTAAACGTAAAATCAAGTGCGCCTATGACTCGAGCCAAGCCATTGTCAGCTGGTAGGGGAAGAGGAAGCAAAGCAGCTGCTCCAAAATTAGGGGCACAAAGGACTAATCGAACATCGTTTACTAGTATGTGA

Protein sequence

MHNDKFSLAAIGNILVLSGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPMTRAKPLSAGRGRGSKAAAPKLGAQRTNRTSFTSM*
Homology
[Close]
BLAST of MELO3C026565 vs. TrEMBL
Match: A0A0A0LBV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G642700 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.5e-19
Identity = 58/83 (69.88%), Postives = 61/83 (73.49%), Query Frame = 1 

Query: 20  SRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPM---------------TRAKPLS 79
           S  +AR AKE+DDLWGSIAA  PRTVSK LNVKSSAP+               TRAKPLS
Sbjct: 232 SSRSARPAKEDDDLWGSIAAPAPRTVSKPLNVKSSAPVDDDDPWAAIAAPAPSTRAKPLS 291

Query: 80  AGRGRGSKAAAPKLGAQRTNRTS 88
           AGRGRGSKAAAPKLGAQR NRTS
Sbjct: 292 AGRGRGSKAAAPKLGAQRINRTS 314

[Close]
BLAST of MELO3C026565 vs. TrEMBL
Match: A0A0B0N8G0_GOSAR (N-terminal kinase-like protein OS=Gossypium arboreum GN=F383_13292 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-15
Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 1 

Query: 21  RSTARLAKEEDD-LWGSIAALDPRTVSKLLNVKSSA---------------PMTRAKPLS 80
           +ST + AK+EDD LWGSIAA  P++ S+ LNVK++                P T+AKPLS
Sbjct: 617 KSTVKAAKDEDDDLWGSIAAAPPKSASRPLNVKTAGAVDDDDPWAAIAAPPPTTKAKPLS 676

Query: 81  AGRGRGSKAAAPKLGAQRTNRTSFTSM 92
           AGRGRG++AAAPKLGAQR NRTS T M
Sbjct: 677 AGRGRGNRAAAPKLGAQRINRTSSTGM 703

[Close]
BLAST of MELO3C026565 vs. TrEMBL
Match: A0A0D2TTU7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G292700 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.4e-15
Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 1 

Query: 21  RSTARLAKEEDD-LWGSIAALDPRTVSKLLNVKSSA---------------PMTRAKPLS 80
           +ST + AK+EDD LWGSIAA  P++ S+ LNVK++                P T+AKPLS
Sbjct: 772 KSTVKAAKDEDDDLWGSIAAPPPKSASRPLNVKTAGAVDDDDPWAAIAAPPPTTKAKPLS 831

Query: 81  AGRGRGSKAAAPKLGAQRTNRTSFTSM 92
           AGRGRG++AAAPKLGAQR NRTS T M
Sbjct: 832 AGRGRGNRAAAPKLGAQRINRTSSTGM 858

[Close]
BLAST of MELO3C026565 vs. TrEMBL
Match: A0A0K9QIT5_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_174440 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-14
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 1 

Query: 18  SGSRSTARLAKEEDD-LWGSIAALDPRTVSKLLNVKSSA--------------PMTRAKP 77
           S  +ST R+AK++DD LWGSIAA  P+T SK LN+ +S               P+T+AKP
Sbjct: 586 SQPKSTVRIAKDDDDELWGSIAAPPPKTTSKSLNLGTSKTKDDDLWGAIAAPPPITKAKP 645

Query: 78  LSAGRGRGSKAAAPKLGAQRTNRTS 88
           LSAGRGRG+K AAPKLGAQR NRTS
Sbjct: 646 LSAGRGRGAKPAAPKLGAQRINRTS 670

[Close]
BLAST of MELO3C026565 vs. TrEMBL
Match: A0A061FTQ4_THECC (Kinase family protein with ARM repeat domain isoform 1 OS=Theobroma cacao GN=TCM_045553 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.8e-14
Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 1 

Query: 21  RSTARLAKEEDD-LWGSIAALDPRTVSKLLNVKSSA---------------PMTRAKPLS 80
           +ST ++ K+EDD LWGSIAA  P++ SK LNVK++                P T+AKPLS
Sbjct: 716 KSTVKVTKDEDDDLWGSIAAPPPKSASKPLNVKTAGAVDDDDPWAAIAAPPPTTKAKPLS 775

Query: 81  AGRGRGSKAAAPKLGAQRTNRTSFTSM 92
           AGRGRG+K AAPKLGAQR NRTS + M
Sbjct: 776 AGRGRGAKPAAPKLGAQRINRTSSSGM 802

[Close]
BLAST of MELO3C026565 vs. TAIR10
Match: AT2G40730.1 (AT2G40730.1 Protein kinase family protein with ARM repeat domain)

HSP 1 Score: 76.6 bits (187), Expect = 8.7e-15
Identity = 43/74 (58.11%), Postives = 46/74 (62.16%), Query Frame = 1 

Query: 29  EEDDLWGSIAALDPRTVSKLLNVKSSA---------------PMTRAKPLSAGRGRGSKA 88
           E+DDLWGSIAA  P T S+ LNVK +                P TRAKPLS+GRGRG+K 
Sbjct: 722 EDDDLWGSIAAPPPATTSRPLNVKKTVQSDDEDPWAAIAAPPPTTRAKPLSSGRGRGAKP 781

[Close]
BLAST of MELO3C026565 vs. NCBI nr
Match: gi|659120614|ref|XP_008460276.1| (PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 6.9e-22
Identity = 63/91 (69.23%), Postives = 67/91 (73.63%), Query Frame = 1 

Query: 16  VLSGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPM---------------TRA 75
           +LSGSRSTAR AKE+DDLWGSIAA  PR VSK LNVKSSAP+               TRA
Sbjct: 707 ILSGSRSTARPAKEDDDLWGSIAAPAPRAVSKPLNVKSSAPVDDDDPWAAIAAPAPTTRA 766

Query: 76  KPLSAGRGRGSKAAAPKLGAQRTNRTSFTSM 92
           KPLSAGRGRG+KAA PKLGAQR NRTS T M
Sbjct: 767 KPLSAGRGRGNKAAPPKLGAQRINRTSSTGM 797

[Close]
BLAST of MELO3C026565 vs. NCBI nr
Match: gi|449453348|ref|XP_004144420.1| (PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-21
Identity = 64/91 (70.33%), Postives = 68/91 (74.73%), Query Frame = 1 

Query: 16  VLSGSRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPM---------------TRA 75
           +LSGSRS AR AKE+DDLWGSIAA  PRTVSK LNVKSSAP+               TRA
Sbjct: 707 ILSGSRS-ARPAKEDDDLWGSIAAPAPRTVSKPLNVKSSAPVDDDDPWAAIAAPAPSTRA 766

Query: 76  KPLSAGRGRGSKAAAPKLGAQRTNRTSFTSM 92
           KPLSAGRGRGSKAAAPKLGAQR NRTS + M
Sbjct: 767 KPLSAGRGRGSKAAAPKLGAQRINRTSSSGM 796

[Close]
BLAST of MELO3C026565 vs. NCBI nr
Match: gi|659120620|ref|XP_008460279.1| (PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 6.5e-20
Identity = 60/87 (68.97%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 20  SRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPM---------------TRAKPLS 79
           SRSTAR AKE+DDLWGSIAA  PR VSK LNVKSSAP+               TRAKPLS
Sbjct: 708 SRSTARPAKEDDDLWGSIAAPAPRAVSKPLNVKSSAPVDDDDPWAAIAAPAPTTRAKPLS 767

Query: 80  AGRGRGSKAAAPKLGAQRTNRTSFTSM 92
           AGRGRG+KAA PKLGAQR NRTS T M
Sbjct: 768 AGRGRGNKAAPPKLGAQRINRTSSTGM 794

[Close]
BLAST of MELO3C026565 vs. NCBI nr
Match: gi|778682394|ref|XP_011651704.1| (PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 3.2e-19
Identity = 59/87 (67.82%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 20  SRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPM---------------TRAKPLS 79
           S  +AR AKE+DDLWGSIAA  PRTVSK LNVKSSAP+               TRAKPLS
Sbjct: 707 SSRSARPAKEDDDLWGSIAAPAPRTVSKPLNVKSSAPVDDDDPWAAIAAPAPSTRAKPLS 766

Query: 80  AGRGRGSKAAAPKLGAQRTNRTSFTSM 92
           AGRGRGSKAAAPKLGAQR NRTS + M
Sbjct: 767 AGRGRGSKAAAPKLGAQRINRTSSSGM 793

[Close]
BLAST of MELO3C026565 vs. NCBI nr
Match: gi|700203296|gb|KGN58429.1| (hypothetical protein Csa_3G642700 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 9.3e-19
Identity = 58/83 (69.88%), Postives = 61/83 (73.49%), Query Frame = 1 

Query: 20  SRSTARLAKEEDDLWGSIAALDPRTVSKLLNVKSSAPM---------------TRAKPLS 79
           S  +AR AKE+DDLWGSIAA  PRTVSK LNVKSSAP+               TRAKPLS
Sbjct: 232 SSRSARPAKEDDDLWGSIAAPAPRTVSKPLNVKSSAPVDDDDPWAAIAAPAPSTRAKPLS 291

Query: 80  AGRGRGSKAAAPKLGAQRTNRTS 88
           AGRGRGSKAAAPKLGAQR NRTS
Sbjct: 292 AGRGRGSKAAAPKLGAQRINRTS 314

The following BLAST results are available for this feature:
BLAST of MELO3C026565 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBV8_CUCSA6.5e-1969.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G642700 PE=4 SV=1[more]
A0A0B0N8G0_GOSAR4.4e-1556.32N-terminal kinase-like protein OS=Gossypium arboreum GN=F383_13292 PE=4 SV=1[more]
A0A0D2TTU7_GOSRA7.4e-1556.32Uncharacterized protein OS=Gossypium raimondii GN=B456_009G292700 PE=4 SV=1[more]
A0A0K9QIT5_SPIOL1.7e-1457.65Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_174440 PE=4 SV=1[more]
A0A061FTQ4_THECC2.8e-1455.17Kinase family protein with ARM repeat domain isoform 1 OS=Theobroma cacao GN=TCM... [more]
BLAST of MELO3C026565 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40730.18.7e-1558.11 Protein kinase family protein with ARM repeat domain[more]
BLAST of MELO3C026565 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120614|ref|XP_008460276.1|6.9e-2269.23PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cu... [more]
gi|449453348|ref|XP_004144420.1|5.8e-2170.33PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Cu... [more]
gi|659120620|ref|XP_008460279.1|6.5e-2068.97PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cu... [more]
gi|778682394|ref|XP_011651704.1|3.2e-1967.82PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [Cu... [more]
gi|700203296|gb|KGN58429.1|9.3e-1969.88hypothetical protein Csa_3G642700 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026565T1MELO3C026565T1mRNA