MELO3C026490 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026490
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAuxin response factor
Locationchr4 : 6941753 .. 6942141 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACTGCAAAGTGAGCCCCAAAGCACTGATCCAGAGCCACCTGAGTGTACAAGGAAAACTGTTCATTGTTTTTATATGATTTTGACTGCTTCTGATACTAGCACTCATGGAGGTTTCTCAGTTCTTAGAAAGCATGCCACTGAAAGTCTTCCTCCCTTTGTAAATCTTTCTACTATTACTATCATTTTTCTTCCATTTTTGTGGCTTCGTTTCTGAATGGTCGTTTCTTTTATTAAACATAGGATATAATTCAATCCACCCCAACTCAGGAGTTAGCTGCCAAGGATCTTCATGGTTACGAGCCAAAATTTAAGCATATTCTCAGGGGTACTTACTTCATTTTAAGTTATTTTAAGTATGTACATTCTTTAACTATTAACTTCTAG

mRNA sequence

ATGAGACTGCAAAGTGAGCCCCAAAGCACTGATCCAGAGCCACCTGAGTGTACAAGGAAAACTGTTCATTGTTTTTATATGATTTTGACTGCTTCTGATACTAGCACTCATGGAGGTTTCTCAGTTCTTAGAAAGCATGCCACTGAAAGTCTTCCTCCCTTTGATATAATTCAATCCACCCCAACTCAGGAGTTAGCTGCCAAGGATCTTCATGGTTACGAGCCAAAATTTAAGCATATTCTCAGGGGTACTTACTTCATTTTAAGTTATTTTAAGTATGTACATTCTTTAACTATTAACTTCTAG

Coding sequence (CDS)

ATGAGACTGCAAAGTGAGCCCCAAAGCACTGATCCAGAGCCACCTGAGTGTACAAGGAAAACTGTTCATTGTTTTTATATGATTTTGACTGCTTCTGATACTAGCACTCATGGAGGTTTCTCAGTTCTTAGAAAGCATGCCACTGAAAGTCTTCCTCCCTTTGATATAATTCAATCCACCCCAACTCAGGAGTTAGCTGCCAAGGATCTTCATGGTTACGAGCCAAAATTTAAGCATATTCTCAGGGGTACTTACTTCATTTTAAGTTATTTTAAGTATGTACATTCTTTAACTATTAACTTCTAG

Protein sequence

MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRGTYFILSYFKYVHSLTINF*
Homology
[Close]
BLAST of MELO3C026490 vs. Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-26
Identity = 56/78 (71.79%), Postives = 59/78 (75.64%), Query Frame = 1 

Query: 6   EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQEL 65
           EP S DP PPE  R  VH F  +LTASDTSTHGGFSVLRKHATE LPP D+ Q TPTQEL
Sbjct: 97  EPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQEL 156

Query: 66  AAKDLHGYEPKFKHILRG 84
            A+D+HGY+ KFKHI RG
Sbjct: 157 VAEDVHGYQWKFKHIFRG 174

[Close]
BLAST of MELO3C026490 vs. Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3)

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-24
Identity = 56/80 (70.00%), Postives = 58/80 (72.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEP S DP   E  + TV  F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q TPTQ
Sbjct: 124 QSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQ 183

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL A+DLHGYE +FKHI RG
Sbjct: 184 ELVARDLHGYEWRFKHIFRG 203

[Close]
BLAST of MELO3C026490 vs. Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-23
Identity = 53/80 (66.25%), Postives = 58/80 (72.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEP S DP     T++  H F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q+TPTQ
Sbjct: 107 QSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQ 166

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL  +DLHG+E +FKHI RG
Sbjct: 167 ELVTRDLHGFEWRFKHIFRG 186

[Close]
BLAST of MELO3C026490 vs. Swiss-Prot
Match: ARFA_ORYSJ (Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.0e-21
Identity = 50/77 (64.94%), Postives = 52/77 (67.53%), Query Frame = 1 

Query: 7   PQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELA 66
           P   DP  PE  R  VH F  ILT SDTSTHGGFSVLR+HA E LPP D+  +TPTQEL 
Sbjct: 104 PTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELI 163

Query: 67  AKDLHGYEPKFKHILRG 84
            KDLHG E +FKHI RG
Sbjct: 164 TKDLHGSEWRFKHIYRG 180

[Close]
BLAST of MELO3C026490 vs. Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.5e-20
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           Q+E  S  PEP E  +  VH F   LTASDTSTHGGFSVLR+HA E LPP D+ Q+ P Q
Sbjct: 107 QNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQ 166

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL A+DLHG E  F+HI RG
Sbjct: 167 ELVARDLHGNEWHFRHIFRG 186

[Close]
BLAST of MELO3C026490 vs. TrEMBL
Match: A0A0A0K887_CUCSA (Auxin response factor OS=Cucumis sativus GN=Csa_7G329330 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-30
Identity = 68/80 (85.00%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEPQS DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQ
Sbjct: 104 QSEPQSADPEPPERTRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQ 163

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           ELAAKDLHGYE KFKHI RG
Sbjct: 164 ELAAKDLHGYEWKFKHIFRG 183

[Close]
BLAST of MELO3C026490 vs. TrEMBL
Match: A0A0B0MHY8_GOSAR (Auxin response factor OS=Gossypium arboreum GN=F383_21897 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-26
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEP S DP P E  ++TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ Q+TPTQ
Sbjct: 109 QSEPTSPDPCPAEVPKRTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQATPTQ 168

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           ELAAKDLHGYE +FKHI RG
Sbjct: 169 ELAAKDLHGYEWRFKHIFRG 188

[Close]
BLAST of MELO3C026490 vs. TrEMBL
Match: M5XS24_PRUPE (Auxin response factor OS=Prunus persica GN=PRUPE_ppa002230mg PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-26
Identity = 62/80 (77.50%), Postives = 66/80 (82.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEP S DP  PE ++ TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+IQ+TPTQ
Sbjct: 106 QSEPTSPDPCIPEPSKPTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMIQATPTQ 165

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL AKDLHGYE KFKHI RG
Sbjct: 166 ELNAKDLHGYEWKFKHIFRG 185

[Close]
BLAST of MELO3C026490 vs. TrEMBL
Match: U5FPS3_POPTR (Auxin response factor OS=Populus trichocarpa GN=POPTR_0014s09560g PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           Q+ P S DP PPE  ++TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ Q+TPTQ
Sbjct: 94  QTRPTSPDPCPPEPAKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQATPTQ 153

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           ELAA+DLHGYE +FKHI RG
Sbjct: 154 ELAARDLHGYEWRFKHIFRG 173

[Close]
BLAST of MELO3C026490 vs. TrEMBL
Match: U5FV32_POPTR (Auxin response factor OS=Populus trichocarpa GN=POPTR_0014s09560g PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           Q+ P S DP PPE  ++TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ Q+TPTQ
Sbjct: 95  QTRPTSPDPCPPEPAKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQATPTQ 154

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           ELAA+DLHGYE +FKHI RG
Sbjct: 155 ELAARDLHGYEWRFKHIFRG 174

[Close]
BLAST of MELO3C026490 vs. TAIR10
Match: AT4G23980.1 (AT4G23980.1 auxin response factor 9)

HSP 1 Score: 120.6 bits (301), Expect = 5.8e-28
Identity = 56/78 (71.79%), Postives = 59/78 (75.64%), Query Frame = 1 

Query: 6   EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQEL 65
           EP S DP PPE  R  VH F  +LTASDTSTHGGFSVLRKHATE LPP D+ Q TPTQEL
Sbjct: 97  EPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQEL 156

Query: 66  AAKDLHGYEPKFKHILRG 84
            A+D+HGY+ KFKHI RG
Sbjct: 157 VAEDVHGYQWKFKHIFRG 174

[Close]
BLAST of MELO3C026490 vs. TAIR10
Match: AT2G46530.3 (AT2G46530.3 auxin response factor 11)

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-25
Identity = 56/80 (70.00%), Postives = 58/80 (72.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEP S DP   E  + TV  F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q TPTQ
Sbjct: 124 QSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQ 183

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL A+DLHGYE +FKHI RG
Sbjct: 184 ELVARDLHGYEWRFKHIFRG 203

[Close]
BLAST of MELO3C026490 vs. TAIR10
Match: AT3G61830.1 (AT3G61830.1 auxin response factor 18)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-24
Identity = 53/80 (66.25%), Postives = 58/80 (72.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEP S DP     T++  H F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q+TPTQ
Sbjct: 107 QSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQ 166

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL  +DLHG+E +FKHI RG
Sbjct: 167 ELVTRDLHGFEWRFKHIFRG 186

[Close]
BLAST of MELO3C026490 vs. TAIR10
Match: AT1G59750.1 (AT1G59750.1 auxin response factor 1)

HSP 1 Score: 94.0 bits (232), Expect = 5.8e-20
Identity = 48/80 (60.00%), Postives = 51/80 (63.75%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEP S D    E  + TVH F   LTASDTSTHGGFSVLR+HA + LPP D+ Q  P Q
Sbjct: 103 QSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQ 162

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL A DLH  E  F+HI RG
Sbjct: 163 ELVATDLHNSEWHFRHIFRG 182

[Close]
BLAST of MELO3C026490 vs. TAIR10
Match: AT5G62000.1 (AT5G62000.1 auxin response factor 2)

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-19
Identity = 47/78 (60.26%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 6   EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQEL 65
           E ++  P PP   R  VH F   LTASDTSTHGGFSVLR+HA E LPP D+ +  PTQEL
Sbjct: 148 EKEAPLPPPP---RFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 207

Query: 66  AAKDLHGYEPKFKHILRG 84
            AKDLH  E +F+HI RG
Sbjct: 208 VAKDLHANEWRFRHIFRG 222

[Close]
BLAST of MELO3C026490 vs. NCBI nr
Match: gi|449443756|ref|XP_004139643.1| (PREDICTED: auxin response factor 18 isoform X1 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-30
Identity = 68/80 (85.00%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEPQS DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQ
Sbjct: 104 QSEPQSADPEPPERTRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQ 163

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           ELAAKDLHGYE KFKHI RG
Sbjct: 164 ELAAKDLHGYEWKFKHIFRG 183

[Close]
BLAST of MELO3C026490 vs. NCBI nr
Match: gi|778726762|ref|XP_011659155.1| (PREDICTED: auxin response factor 18 isoform X2 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-30
Identity = 68/80 (85.00%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEPQS DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQ
Sbjct: 104 QSEPQSADPEPPERTRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQ 163

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           ELAAKDLHGYE KFKHI RG
Sbjct: 164 ELAAKDLHGYEWKFKHIFRG 183

[Close]
BLAST of MELO3C026490 vs. NCBI nr
Match: gi|659124359|ref|XP_008462117.1| (PREDICTED: auxin response factor 18-like [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 4.9e-29
Identity = 66/80 (82.50%), Postives = 69/80 (86.25%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           QSEPQ+ DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LP  D+ QSTPTQ
Sbjct: 64  QSEPQNADPEPPERTRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPSLDMSQSTPTQ 123

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           ELAAKDLHGYE KFKHI RG
Sbjct: 124 ELAAKDLHGYEWKFKHIFRG 143

[Close]
BLAST of MELO3C026490 vs. NCBI nr
Match: gi|1009142516|ref|XP_015888764.1| (PREDICTED: auxin response factor 18 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 128.3 bits (321), Expect = 7.9e-27
Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           Q+EP   DP PPE TR TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ Q+TPTQ
Sbjct: 112 QNEPTRPDPCPPETTRPTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTQATPTQ 171

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL AKDLHGYE KFKHI RG
Sbjct: 172 ELVAKDLHGYEWKFKHIFRG 191

[Close]
BLAST of MELO3C026490 vs. NCBI nr
Match: gi|1009142518|ref|XP_015888765.1| (PREDICTED: auxin response factor 18 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 128.3 bits (321), Expect = 7.9e-27
Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 1 

Query: 4   QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQ 63
           Q+EP   DP PPE TR TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ Q+TPTQ
Sbjct: 106 QNEPTRPDPCPPETTRPTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTQATPTQ 165

Query: 64  ELAAKDLHGYEPKFKHILRG 84
           EL AKDLHGYE KFKHI RG
Sbjct: 166 ELVAKDLHGYEWKFKHIFRG 185

The following BLAST results are available for this feature:
BLAST of MELO3C026490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARFI_ARATH1.0e-2671.79Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=1 SV=1[more]
ARFK_ARATH3.7e-2470.00Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3[more]
ARFR_ARATH3.1e-2366.25Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1[more]
ARFA_ORYSJ5.0e-2164.94Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1[more]
ARFG_ORYSJ5.5e-2061.25Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1[more]
BLAST of MELO3C026490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K887_CUCSA1.8e-3085.00Auxin response factor OS=Cucumis sativus GN=Csa_7G329330 PE=3 SV=1[more]
A0A0B0MHY8_GOSAR3.6e-2676.25Auxin response factor OS=Gossypium arboreum GN=F383_21897 PE=3 SV=1[more]
M5XS24_PRUPE4.7e-2677.50Auxin response factor OS=Prunus persica GN=PRUPE_ppa002230mg PE=3 SV=1[more]
U5FPS3_POPTR1.0e-2573.75Auxin response factor OS=Populus trichocarpa GN=POPTR_0014s09560g PE=3 SV=1[more]
U5FV32_POPTR1.0e-2573.75Auxin response factor OS=Populus trichocarpa GN=POPTR_0014s09560g PE=3 SV=1[more]
BLAST of MELO3C026490 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23980.15.8e-2871.79 auxin response factor 9[more]
AT2G46530.32.1e-2570.00 auxin response factor 11[more]
AT3G61830.11.7e-2466.25 auxin response factor 18[more]
AT1G59750.15.8e-2060.00 auxin response factor 1[more]
AT5G62000.12.2e-1960.26 auxin response factor 2[more]
BLAST of MELO3C026490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443756|ref|XP_004139643.1|2.6e-3085.00PREDICTED: auxin response factor 18 isoform X1 [Cucumis sativus][more]
gi|778726762|ref|XP_011659155.1|2.6e-3085.00PREDICTED: auxin response factor 18 isoform X2 [Cucumis sativus][more]
gi|659124359|ref|XP_008462117.1|4.9e-2982.50PREDICTED: auxin response factor 18-like [Cucumis melo][more]
gi|1009142516|ref|XP_015888764.1|7.9e-2777.50PREDICTED: auxin response factor 18 isoform X1 [Ziziphus jujuba][more]
gi|1009142518|ref|XP_015888765.1|7.9e-2777.50PREDICTED: auxin response factor 18 isoform X2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026490T1MELO3C026490T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 20..83
score: 2.7
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 17..84
score: 2.49
NoneNo IPR availablePANTHERPTHR31384FAMILY NOT NAMEDcoord: 7..83
score: 1.0
NoneNo IPR availablePANTHERPTHR31384:SF17AUXIN RESPONSE FACTOR 11-RELATEDcoord: 7..83
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026490Wax gourdmewgoB384
MELO3C026490Wax gourdmewgoB436
MELO3C026490Cucumber (Gy14) v1cgymeB559
MELO3C026490Cucurbita maxima (Rimu)cmameB032
MELO3C026490Cucurbita maxima (Rimu)cmameB424
MELO3C026490Cucurbita moschata (Rifu)cmomeB021
MELO3C026490Cucurbita moschata (Rifu)cmomeB414
MELO3C026490Wild cucumber (PI 183967)cpimeB215
MELO3C026490Watermelon (Charleston Gray)mewcgB331
MELO3C026490Watermelon (97103) v1mewmB368
MELO3C026490Cucurbita pepo (Zucchini)cpemeB726
MELO3C026490Bottle gourd (USVL1VR-Ls)lsimeB311
MELO3C026490Cucumber (Gy14) v2cgybmeB185
MELO3C026490Silver-seed gourdcarmeB0106
MELO3C026490Cucumber (Chinese Long) v3cucmeB219
MELO3C026490Watermelon (97103) v2mewmbB332