MELO3C026460 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026460
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZinc finger protein 740
Locationchr10 : 22174165 .. 22174383 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAATTGATCAAGATTGAGAAGGGACTGCTCCCATTTAACAGTCATCTACCAGACTTCCTCTATGGCCCCATCAAAGCGTTGAAATGGGAGAAATTTTTCACGGGCGAGATGAAAGTAAGGTTGGATATAATAGACATGTTTTACGCGACGAAATACCATCTGGACGAATCGTACGCGATTATGGAAGGTGAAAAGGTTCTTTTCACCGCATAA

mRNA sequence

ATGGATAAATTGATCAAGATTGAGAAGGGACTGCTCCCATTTAACAGTCATCTACCAGACTTCCTCTATGGCCCCATCAAAGCGTTGAAATGGGAGAAATTTTTCACGGGCGAGATGAAAGTAAGGTTGGATATAATAGACATGTTTTACGCGACGAAATACCATCTGGACGAATCGTACGCGATTATGGAAGGTGAAAAGGTTCTTTTCACCGCATAA

Coding sequence (CDS)

ATGGATAAATTGATCAAGATTGAGAAGGGACTGCTCCCATTTAACAGTCATCTACCAGACTTCCTCTATGGCCCCATCAAAGCGTTGAAATGGGAGAAATTTTTCACGGGCGAGATGAAAGTAAGGTTGGATATAATAGACATGTTTTACGCGACGAAATACCATCTGGACGAATCGTACGCGATTATGGAAGGTGAAAAGGTTCTTTTCACCGCATAA

Protein sequence

MDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYHLDESYAIMEGEKVLFTA*
Homology
[Close]
BLAST of MELO3C026460 vs. TrEMBL
Match: A0A0A0LT82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G169970 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 8.5e-22
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 1 

Query: 1  MDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYHLDESY 60
          +D+LIKIEKGLL FN  LPDFLY PIKALKWEKFFT E KV+ D++D+FYATK+H  ESY
Sbjct: 6  LDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFHPKESY 65

Query: 61 AIMEGEKVLFT 72
          AI++ E+V FT
Sbjct: 66 AIVDDERVPFT 76

[Close]
BLAST of MELO3C026460 vs. TrEMBL
Match: A0A0A0L9V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G283010 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.3e-09
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1 

Query: 8   EKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYH 56
           +KGLL FN  LPDFL+  IKALKWEK    E +V+LD+++MFYA K+H
Sbjct: 128 KKGLLSFNGLLPDFLHRSIKALKWEKLLLSEARVKLDLVEMFYAVKFH 175

[Close]
BLAST of MELO3C026460 vs. TrEMBL
Match: A0A0A0KXQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091900 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-06
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 1  MDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGE 39
          +DKLIKIEKGLLPF   LPDFL  PIKA KW+KFF  E
Sbjct: 37 LDKLIKIEKGLLPFKGPLPDFLPDPIKAFKWKKFFIVE 74

[Close]
BLAST of MELO3C026460 vs. NCBI nr
Match: gi|700209877|gb|KGN64973.1| (hypothetical protein Csa_1G169970 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-21
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 1 

Query: 1  MDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYHLDESY 60
          +D+LIKIEKGLL FN  LPDFLY PIKALKWEKFFT E KV+ D++D+FYATK+H  ESY
Sbjct: 6  LDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFHPKESY 65

Query: 61 AIMEGEKVLFT 72
          AI++ E+V FT
Sbjct: 66 AIVDDERVPFT 76

[Close]
BLAST of MELO3C026460 vs. NCBI nr
Match: gi|700202631|gb|KGN57764.1| (hypothetical protein Csa_3G283010 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-08
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1 

Query: 8   EKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYH 56
           +KGLL FN  LPDFL+  IKALKWEK    E +V+LD+++MFYA K+H
Sbjct: 128 KKGLLSFNGLLPDFLHRSIKALKWEKLLLSEARVKLDLVEMFYAVKFH 175

[Close]
BLAST of MELO3C026460 vs. NCBI nr
Match: gi|700198466|gb|KGN53624.1| (hypothetical protein Csa_4G091900 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-06
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 1  MDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGE 39
          +DKLIKIEKGLLPF   LPDFL  PIKA KW+KFF  E
Sbjct: 37 LDKLIKIEKGLLPFKGPLPDFLPDPIKAFKWKKFFIVE 74

The following BLAST results are available for this feature:
BLAST of MELO3C026460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT82_CUCSA8.5e-2270.42Uncharacterized protein OS=Cucumis sativus GN=Csa_1G169970 PE=4 SV=1[more]
A0A0A0L9V9_CUCSA8.3e-0960.42Uncharacterized protein OS=Cucumis sativus GN=Csa_3G283010 PE=4 SV=1[more]
A0A0A0KXQ2_CUCSA1.7e-0673.68Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091900 PE=4 SV=1[more]
BLAST of MELO3C026460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209877|gb|KGN64973.1|1.2e-2170.42hypothetical protein Csa_1G169970 [Cucumis sativus][more]
gi|700202631|gb|KGN57764.1|1.2e-0860.42hypothetical protein Csa_3G283010 [Cucumis sativus][more]
gi|700198466|gb|KGN53624.1|2.5e-0673.68hypothetical protein Csa_4G091900 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026460T1MELO3C026460T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026460Cucurbita pepo (Zucchini)cpemeB374
MELO3C026460Bottle gourd (USVL1VR-Ls)lsimeB081
MELO3C026460Wax gourdmewgoB079
MELO3C026460Cucurbita maxima (Rimu)cmameB663
MELO3C026460Cucurbita moschata (Rifu)cmomeB656
MELO3C026460Wild cucumber (PI 183967)cpimeB378
MELO3C026460Watermelon (Charleston Gray)mewcgB051
MELO3C026460Watermelon (97103) v1mewmB074