MELO3C026411.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C026411.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr07 : 6315318 .. 6315477 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAAAAGCATTTAAAACCAATGGAGAAGGAAAGGGACGTCACAAGCAGAGGTCAGAGCAAAAGATTCGGTACTATAAGCAATACCAAGTGAGCTACACGGGAGGACACGTGGCGAATTGTGAATACGTCTGTGATTTTCTTGTAGGACCAACAG

mRNA sequence

ATGGACCAAAAAGCATTTAAAACCAATGGAGAAGGAAAGGGACGTCACAAGCAGAGGTCAGAGCAAAAGATTCGGTACTATAAGCAATACCAAGTGAGCTACACGGGAGGACACGTGGCGAATTGTGAATACGTCTGTGATTTTCTTGTAGGACCAACAG

Coding sequence (CDS)

ATGGACCAAAAAGCATTTAAAACCAATGGAGAAGGAAAGGGACGTCACAAGCAGAGGTCAGAGCAAAAGATTCGGTACTATAAGCAATACCAAGTGAGCTACACGGGAGGACACGTGGCGAATTGTGAATACGTCTGTGATTTTCTTGTAGGACCAACA

Protein sequence

MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGHVANCEYVCDFLVGPT
BLAST of MELO3C026411.2 vs. NCBI nr
Match: KGN54952.1 (hypothetical protein Csa_4G615235 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGHVANCEYVCDFLVGPT 54
          MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGG VANC+ VCDFLVGPT
Sbjct: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGQVANCQCVCDFLVGPT 53

BLAST of MELO3C026411.2 vs. TrEMBL
Match: tr|A0A0A0L2X9|A0A0A0L2X9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G615235 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGHVANCEYVCDFLVGPT 54
          MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGG VANC+ VCDFLVGPT
Sbjct: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGQVANCQCVCDFLVGPT 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN54952.11.9e-2094.34hypothetical protein Csa_4G615235 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L2X9|A0A0A0L2X9_CUCSA1.3e-2094.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G615235 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026411.2.1MELO3C026411.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None