MELO3C026411 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026411
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139)
Locationchr7 : 6241796 .. 6241955 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAAAAGCATTTAAAACCAATGGAGAAGGAAAGGGACGTCACAAGCAGAGGTCAGAGCAAAAGATTCGGTACTATAAGCAATACCAAGTGAGCTACACGGGAGGACACGTGGCGAATTGTGAATACGTCTGTGATTTTCTTGTAGGACCAACAG

mRNA sequence

ATGGACCAAAAAGCATTTAAAACCAATGGAGAAGGAAAGGGACGTCACAAGCAGAGGTCAGAGCAAAAGATTCGGTACTATAAGCAATACCAAGTGAGCTACACGGGAGGACACGTGGCGAATTGTGAATACGTCTGTGATTTTCTTGTAGGACCAACAG

Coding sequence (CDS)

ATGGACCAAAAAGCATTTAAAACCAATGGAGAAGGAAAGGGACGTCACAAGCAGAGGTCAGAGCAAAAGATTCGGTACTATAAGCAATACCAAGTGAGCTACACGGGAGGACACGTGGCGAATTGTGAATACGTCTGTGATTTTCTTGTAGGACCAACAG

Protein sequence

MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGHVANCEYVCDFLVGPT
Homology
[Close]
BLAST of MELO3C026411 vs. TrEMBL
Match: A0A0A0L2X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G615235 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-21
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1 

Query: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGHVANCEYVCDFLVGPT 54
          MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGG VANC+ VCDFLVGPT
Sbjct: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGQVANCQCVCDFLVGPT 53

[Close]
BLAST of MELO3C026411 vs. NCBI nr
Match: gi|700199794|gb|KGN54952.1| (hypothetical protein Csa_4G615235 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-21
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1 

Query: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGHVANCEYVCDFLVGPT 54
          MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGG VANC+ VCDFLVGPT
Sbjct: 1  MDQKAFKTNGEGKGRHKQRSEQKIRYYKQYQVSYTGGQVANCQCVCDFLVGPT 53

The following BLAST results are available for this feature:
BLAST of MELO3C026411 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2X9_CUCSA1.1e-2194.34Uncharacterized protein OS=Cucumis sativus GN=Csa_4G615235 PE=4 SV=1[more]
BLAST of MELO3C026411 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199794|gb|KGN54952.1|1.5e-2194.34hypothetical protein Csa_4G615235 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU63639melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026411T1MELO3C026411T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU63639MU63639transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026411Silver-seed gourdcarmeB1012
MELO3C026411Watermelon (97103) v2mewmbB472
MELO3C026411Wax gourdmewgoB596
MELO3C026411Cucumber (Gy14) v1cgymeB041
MELO3C026411Cucurbita maxima (Rimu)cmameB036
MELO3C026411Cucurbita maxima (Rimu)cmameB448
MELO3C026411Cucurbita moschata (Rifu)cmomeB025
MELO3C026411Cucurbita moschata (Rifu)cmomeB439
MELO3C026411Wild cucumber (PI 183967)cpimeB317
MELO3C026411Watermelon (Charleston Gray)mewcgB462
MELO3C026411Watermelon (97103) v1mewmB544
MELO3C026411Cucurbita pepo (Zucchini)cpemeB535
MELO3C026411Cucurbita pepo (Zucchini)cpemeB730