MELO3C026355.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C026355.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description30S ribosomal protein S8, chloroplastic
Locationchr07 : 5592990 .. 5593310 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAGTAGATTGTGTATCATGTATATACGTTTTCAAATTCATAACTATTTAATAAAAAAGAATGTTGATTAGATCAAAATTGAAAGTCACCAATAATTTTCGTTTATCATGGGTAAGGACACTATTACTAACATAATAACCTCTATTCGTAATGCTGACATGAATAGAAAAGGAATGGTTCAAATACCATCTACTAACATCACCGAAAACATTGTGAAAAGACTTTTACGAGAAGGTTTTATTGAAAACTTAAGGAAACATTGGGAAAACAACAAGGATTTTTAGGTTTGAACCCTACAACATAGAAGAAATAGGAAAGGA

mRNA sequence

ATTAGTAGATTGTGTATCATGTATATACGTTTTCAAATTCATAACTATTTAATAAAAAAGAATGTTGATTAGATCAAAATTGAAAGTCACCAATAATTTTCGTTTATCATGGGTAAGGACACTATTACTAACATAATAACCTCTATTCGTAATGCTGACATGAATAGAAAAGGAATGGTTCAAATACCATCTACTAACATCACCGAAAACATTGTGAAAAGACTTTTACGAGAAGGTTTTATTGAAAACTTAAGGAAACATTGGGAAAACAACAAGGATTTTTAGGTTTGAACCCTACAACATAGAAGAAATAGGAAAGGA

Coding sequence (CDS)

ATGGGTAAGGACACTATTACTAACATAATAACCTCTATTCGTAATGCTGACATGAATAGAAAAGGAATGGTTCAAATACCATCTACTAACATCACCGAAAACATTGTGAAAAGACTTTTACGAGAAGGTTTTATTGAAAACTTAAGGAAACATTGGGAAAACAACAAGGATTTTTAG

Protein sequence

MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
Homology
[Close]
BLAST of MELO3C026355.2 vs. NCBI nr
Match: YP_009236314.1 (ribosomal protein S8 (chloroplast) [Gynostemma pentaphyllum] >YP_009440192.1 ribosomal protein S8 (chloroplast) [Gynostemma longipes] >YP_009440279.1 ribosomal protein S8 (chloroplast) [Gynostemma 'burmanicum'] >YP_009440366.1 ribosomal protein S8 (chloroplast) [Gynostemma pubescens] >AMF84028.1 ribosomal protein S8 (chloroplast) [Gynostemma pentaphyllum] >ANI25219.1 ribosomal protein S8 (chloroplast) [Gynostemma pentaphyllum] >ART65011.1 ribosomal protein S8 (chloroplast) [Gynostemma pentaphyllum] >ATG86939.1 ribosomal protein S8 (chloroplast) [Gynostemma longipes] >ATG87026.1 ribosomal protein S8 (chloroplast) [Gynostemma 'burmanicum'] >ATG87113.1 ribosomal protein S8 (chloroplast) [Gynostemma pubescens])

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. NCBI nr
Match: YP_009430662.1 (ribosomal protein S8 (chloroplast) [Gynostemma cardiospermum] >YP_009439839.1 ribosomal protein S8 (chloroplast) [Gynostemma laxiflorum] >ART65098.1 ribosomal protein S8 (chloroplast) [Gynostemma cardiospermum] >ATG86678.1 ribosomal protein S8 (chloroplast) [Gynostemma laxiflorum])

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. NCBI nr
Match: YP_009439926.1 (ribosomal protein S8 (chloroplast) [Gynostemma caulopterum] >YP_009468896.1 ribosomal protein S8 (chloroplast) [Gynostemma compressum] >ATG86766.1 ribosomal protein S8 (chloroplast) [Gynostemma caulopterum] >AVA29857.1 ribosomal protein S8 (chloroplast) [Gynostemma compressum])

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. NCBI nr
Match: AXR94584.1 (ribosomal protein S8 (chloroplast) [Hodgsonia macrocarpa] >AXR94670.1 ribosomal protein S8 (chloroplast) [Hodgsonia macrocarpa] >AXR94753.1 ribosomal protein S8 (chloroplast) [Hodgsonia macrocarpa] >AXR94839.1 ribosomal protein S8 (chloroplast) [Hodgsonia macrocarpa])

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH E+NKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. NCBI nr
Match: YP_009326025.1 (ribosomal protein S8 (chloroplast) [Citrullus lanatus] >YP_009348067.1 ribosomal protein S8 (plastid) [Citrullus mucosospermus] >YP_009420830.1 ribosomal protein S8 (chloroplast) [Citrullus colocynthis] >YP_009431678.1 ribosomal protein S8 (chloroplast) [Citrullus rehmii] >YP_009456181.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM88713.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM88772.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM88830.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM88945.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89003.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89062.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89121.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89180.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89239.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89298.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89358.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89417.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89476.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89535.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89595.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89654.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89713.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89772.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89831.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89890.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM89949.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90008.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90067.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90126.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90185.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90244.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90303.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90362.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90421.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90480.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90539.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90598.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90657.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90716.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90775.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90834.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90893.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM90952.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM91070.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM91128.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM91188.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >AHM91303.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria] >APD52516.1 ribosomal protein S8 (chloroplast) [Citrullus lanatus] >APW82753.1 ribosomal protein S8 (plastid) [Citrullus mucosospermus] >APW82838.1 ribosomal protein S8 (plastid) [Citrullus mucosospermus] >APW82923.1 ribosomal protein S8 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83008.1 ribosomal protein S8 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83093.1 ribosomal protein S8 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83178.1 ribosomal protein S8 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83263.1 ribosomal protein S8 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83348.1 ribosomal protein S8 (plastid) [Citrullus mucosospermus] >ASP44481.1 ribosomal protein S8 (chloroplast) [Citrullus colocynthis] >ASY96266.1 ribosomal protein S8 (chloroplast) [Citrullus rehmii] >AUJ21946.1 ribosomal protein S8 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH E+NKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. TAIR10
Match: ATCG00770.1 (ribosomal protein S8)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-19
Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI +IITSIRNADMNRKG V+I STNITE+IVK LLREGFIEN+RKH ENN+ F
Sbjct: 1  MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYF 58

[Close]
BLAST of MELO3C026355.2 vs. Swiss-Prot
Match: sp|Q4VZK0|RR8_CUCSA (30S ribosomal protein S8, chloroplastic OS=Cucumis sativus OX=3659 GN=rps8 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-21
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IP+TNITENIVK LLREGFIEN+RKH E+NKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. Swiss-Prot
Match: sp|Q6EW16|RR8_NYMAL (30S ribosomal protein S8, chloroplastic OS=Nymphaea alba OX=34301 GN=rps8 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-19
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MG+DTI +IIT IRNADM++KG V+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGRDTIADIITYIRNADMDKKGTVRIPSTNITENIVKILLREGFIENVRKHRENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. Swiss-Prot
Match: sp|P59033|RR8_PHAAN (30S ribosomal protein S8, chloroplastic OS=Phaseolus angularis OX=3914 GN=rps8 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-19
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIIT IRNADMN+KGMVQ+P TNITE IVK LLREGF+EN+RKH ENNK F
Sbjct: 1  MGKDTIANIITYIRNADMNKKGMVQLPFTNITEKIVKILLREGFVENIRKHRENNKYF 58

[Close]
BLAST of MELO3C026355.2 vs. Swiss-Prot
Match: sp|Q49KW3|RR8_EUCGG (30S ribosomal protein S8, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps8 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.0e-19
Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MG+DTI +IITSIRNADMNRKG +QI STNITENIVK LLREGFI+N+RKH ENNK F
Sbjct: 1  MGRDTIADIITSIRNADMNRKGTIQIASTNITENIVKILLREGFIKNVRKHQENNKYF 58

[Close]
BLAST of MELO3C026355.2 vs. Swiss-Prot
Match: sp|Q2PMQ0|RR8_SOYBN (30S ribosomal protein S8, chloroplastic OS=Glycine max OX=3847 GN=rps8 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.0e-19
Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI +IIT IRNADMN+KGMVQIP TNITENIVK LLREGF+EN+RKH EN+K F
Sbjct: 1  MGKDTIADIITYIRNADMNKKGMVQIPFTNITENIVKILLREGFVENVRKHRENDKYF 58

[Close]
BLAST of MELO3C026355.2 vs. TrEMBL
Match: tr|A0A109WXX2|A0A109WXX2_GYNPE (30S ribosomal protein S8, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=rps8 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. TrEMBL
Match: tr|A0A286KU15|A0A286KU15_9ROSI (30S ribosomal protein S8, chloroplastic OS=Gynostemma cardiospermum OX=1739658 GN=rps8 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. TrEMBL
Match: tr|A0A291IAG7|A0A291IAG7_9ROSI (30S ribosomal protein S8, chloroplastic OS=Gynostemma laxiflorum OX=2041848 GN=rps8 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. TrEMBL
Match: tr|A0A2L0WR37|A0A2L0WR37_9ROSI (30S ribosomal protein S8, chloroplastic OS=Gynostemma compressum OX=1348125 GN=rps8 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

[Close]
BLAST of MELO3C026355.2 vs. TrEMBL
Match: tr|A0A291IB69|A0A291IB69_9ROSI (30S ribosomal protein S8, chloroplastic OS=Gynostemma longipes OX=555431 GN=rps8 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-20
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF 59
          MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Sbjct: 1  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHQENNKDF 58

The following BLAST results are available for this feature:
BLAST of MELO3C026355.2 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009236314.13.6e-2091.38ribosomal protein S8 (chloroplast) [Gynostemma pentaphyllum] >YP_009440192.1 rib... [more]
YP_009430662.13.6e-2091.38ribosomal protein S8 (chloroplast) [Gynostemma cardiospermum] >YP_009439839.1 ri... [more]
YP_009439926.13.6e-2091.38ribosomal protein S8 (chloroplast) [Gynostemma caulopterum] >YP_009468896.1 ribo... [more]
AXR94584.11.8e-1989.66ribosomal protein S8 (chloroplast) [Hodgsonia macrocarpa] >AXR94670.1 ribosomal ... [more]
YP_009326025.11.8e-1989.66ribosomal protein S8 (chloroplast) [Citrullus lanatus] >YP_009348067.1 ribosomal... [more]
BLAST of MELO3C026355.2 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00770.12.1e-1981.03ribosomal protein S8[more]
BLAST of MELO3C026355.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4VZK0|RR8_CUCSA1.3e-2187.9330S ribosomal protein S8, chloroplastic OS=Cucumis sativus OX=3659 GN=rps8 PE=3 ... [more]
sp|Q6EW16|RR8_NYMAL2.7e-1981.0330S ribosomal protein S8, chloroplastic OS=Nymphaea alba OX=34301 GN=rps8 PE=3 S... [more]
sp|P59033|RR8_PHAAN2.7e-1981.0330S ribosomal protein S8, chloroplastic OS=Phaseolus angularis OX=3914 GN=rps8 P... [more]
sp|Q49KW3|RR8_EUCGG6.0e-1981.0330S ribosomal protein S8, chloroplastic OS=Eucalyptus globulus subsp. globulus O... [more]
sp|Q2PMQ0|RR8_SOYBN6.0e-1981.0330S ribosomal protein S8, chloroplastic OS=Glycine max OX=3847 GN=rps8 PE=3 SV=1[more]
BLAST of MELO3C026355.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A109WXX2|A0A109WXX2_GYNPE2.4e-2091.3830S ribosomal protein S8, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=... [more]
tr|A0A286KU15|A0A286KU15_9ROSI2.4e-2091.3830S ribosomal protein S8, chloroplastic OS=Gynostemma cardiospermum OX=1739658 G... [more]
tr|A0A291IAG7|A0A291IAG7_9ROSI2.4e-2091.3830S ribosomal protein S8, chloroplastic OS=Gynostemma laxiflorum OX=2041848 GN=r... [more]
tr|A0A2L0WR37|A0A2L0WR37_9ROSI2.4e-2091.3830S ribosomal protein S8, chloroplastic OS=Gynostemma compressum OX=1348125 GN=r... [more]
tr|A0A291IB69|A0A291IB69_9ROSI2.4e-2091.3830S ribosomal protein S8, chloroplastic OS=Gynostemma longipes OX=555431 GN=rps8... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR035987Ribosomal_S8_sf
IPR000630Ribosomal_S8
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0009536 plastid
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026355.2.1MELO3C026355.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 4..54
e-value: 2.3E-11
score: 43.7
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 1..57
NoneNo IPR availableGENE3DG3DSA:3.30.1370.30coord: 3..58
e-value: 3.8E-16
score: 60.9
NoneNo IPR availablePANTHERPTHR11758:SF2030S RIBOSOMAL PROTEIN S8, CHLOROPLASTICcoord: 1..57
IPR035987Ribosomal protein S8 superfamilySUPERFAMILYSSF56047Ribosomal protein S8coord: 1..57

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026355.2Cucumber (Gy14) v2cgybmedB273
MELO3C026355.2Cucumber (Gy14) v1cgymedB041
MELO3C026355.2Cucurbita maxima (Rimu)cmamedB035
MELO3C026355.2Cucurbita maxima (Rimu)cmamedB505
MELO3C026355.2Cucurbita moschata (Rifu)cmomedB025
MELO3C026355.2Cucurbita moschata (Rifu)cmomedB493
MELO3C026355.2Cucurbita pepo (Zucchini)cpemedB642
MELO3C026355.2Cucurbita pepo (Zucchini)cpemedB863
MELO3C026355.2Wild cucumber (PI 183967)cpimedB308
MELO3C026355.2Cucumber (Chinese Long) v2cumedB304
MELO3C026355.2Bottle gourd (USVL1VR-Ls)lsimedB343
MELO3C026355.2Watermelon (Charleston Gray)medwcgB458
MELO3C026355.2Watermelon (97103) v1medwmB532
MELO3C026355.2Silver-seed gourdcarmedB0323
MELO3C026355.2Silver-seed gourdcarmedB0641
MELO3C026355.2Cucumber (Chinese Long) v3cucmedB314
MELO3C026355.2Watermelon (97103) v2medwmbB468
MELO3C026355.2Wax gourdmedwgoB602