MELO3C026351 (gene) Melon (DHL92) v3.5.1

NameMELO3C026351
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRetrotransposon gag protein, putative
Locationchr8 : 29004795 .. 29006836 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAAGGAAAAGTCCTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAAGATTCGCTCCATACCACATGAATGTTCCGCAGTCTCAAACCACTCAACACTATGTTCCTACGAATCCGCTGTACGTTGTTCCACCCATTGTCCAAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTACAAGAAATTGAAGGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAGTTCCTAAATTCGATAAATATGATGGATCAACGTGTACAAGGAGTCATCTTATAATGTACTGCAGAAAGATGGCCCACCATTAATAATGATAAATTGTTAGTCCATTGCTTCCAGGATAACTTGACTGGTCCAGCTAGTCGATGGTATATTCAATTAGATAATGCACACATTCACGTTTGGAAGGACTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACAGATGGAGAAGAAGAGTTCGGAAAGCTTCAAAGAATATGCTCAACGATGGAGAGATATGGCTGCCGAGGTTCAACCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGTAATGCATCAACAAATTTTTCAATGATATTATTGTTATTGGCGAAAGAATTGAATATGGGATAAAACACGGGAGGTTAGCAAAGGCTACAACTGAATATGGTAGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAGAAGAGGTTCATGCAATTGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGCAAAACTTTCCGTCATATATAAGCAATGTCTCTTATATCCCTTATAATAGCTATGTACTAGCCCATACCGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCTCAACCATTTGTAAAGCGTCAAGGTAGCAAAATCAATTCAGATACATGGCGGTTTGATCCGATTCCCATGACTTATATAGAGCTTTTACGTCAACTTATTCAAAATCGACAGTTAGCTCTTATTCCAATGATTCCTATACGGCCTCCTTACCCAAAATGGTTTGATTCAAATGCTCGATGTGATTATCACGCTGGGGGAGTGGGACACTCAACTGAAAATTGTTTGGCTTTGAAAAGAAAAAAAGGTGCAATCTCTAATTAATGCTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAAGCCGAATGTCAATGAAAATCCACTGTCTGATCATGAAAATCCAAAAGTTAACGTTGTGGATAGCCTTGTTGAAAAGTGCAAAAGTGAAGTCCATGAGATAGTGATGCCTATGGAAGCACTTTTTGAAGGTCTTTTTGAAGCAGGATATGTTAGTCATGAATATCTAGACCCTAACATAAGATATGAAGGGTATGATGAAAGCAGACATTGTATATTCCATCAAGGAGTTGCAGGCCACGTTGTCCAACAATGCCAAAAATTTAGATCCAAAGTACAACAACTTATGGATTCAAAGATACTCACGGTATATAGAGGACAAGGAAAAGACGAGATGAAAGACAGTAAAATATGTGCTTTAATGGATGAAGTTTCAGAAAAGAAAGATTCCTTTTTACCAAGACCTTTGACAGTTTTTTATCAAGAAAGTCATAATGAGTCAACCAGCTTTTGCAATCTTAAAAAACTCACGATCCAAGTGCCGAGTCCTTTCAAATTTAAGGATCTAAAAGCAGTGCCATGGTGGTATGATTGTCAGGTCATAACAGGTCCTTCAGTTGATAACATTACAGGAATCAGCGGGATAACCCGAAGTGGAAGATGCTACAAACCAGATAACTTAACAGTCCCTTTAGATGGTCTAATACTAGAGCAAG

mRNA sequence

ATGGGGAAAGGAAAAGTCCTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAAGATTCGCTCCATACCACATGAATGTTCCGCAGTCTCAAACCACTCAACACTATGTTCCTACGAATCCGCTGTACGTTGTTCCACCCATTGTCCAAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTACAAGAAATTGAAGGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGATAACTTGACTGGTCCAGCTAGTCGATGGTATATTCAATTAGATAATGCACACATTCACGTTTGGAAGGACTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACAGATGGAGAAGAAGAGTTCGGAAAGCTTCAAAGAATATGCTCAACGATGGAGAGATATGGCTGCCGAGGTTCAACCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGCAAAACTTTCCGTCATATATAAGCAATGTCTCTTATATCCCTTATAATAGCTATGTACTAGCCCATACCGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCTCAACCATTTGTAAAGCGTCAAGAAAAAAAGGTGCAATCTCTAATTAATGCTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAAGCCGAATGTCAATGAAAATCCACTGTCTGATCATGAAAATCCAAAAGTTAACGTTGTGGATAGCCTTGTTGAAAAGTGCAAAAGTGAAGTCCATGAGATAGTGATGCCTATGGAAGCACTTTTTGAAGGTCTTTTTGAAGCAGGATATGTTAGTCATGAATATCTAGACCCTAACATAAGATATGAAGGGTATGATGAAAGCAGACATTGTATATTCCATCAAGGAGTTGCAGGCCACGTTGTCCAACAATGCCAAAAATTTAGATCCAAAGTACAACAACTTATGGATTCAAAGATACTCACGGTATATAGAGGACAAGGAAAAGACGAGATGAAAGACAGTAAAATATGTGCTTTAATGGATGAAGTTTCAGAAAAGAAAGATTCCTTTTTACCAAGACCTTTGACAGTTTTTTATCAAGAAAGTCATAATGAGTCAACCAGCTTTTGCAATCTTAAAAAACTCACGATCCAAGTGCCGAGTCCTTTCAAATTTAAGGATCTAAAAGCAGTGCCATGGTGGTATGATTGTCAGGTCATAACAGGTCCTTCAGTTGATAACATTACAGGAATCAGCGGGATAACCCGAAGTGGAAGATGCTACAAACCAGATAACTTAACAGTCCCTTTAGATGGTCTAATACTAGAGCAAG

Coding sequence (CDS)

ATGGGGAAAGGAAAAGTCCTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAAGATTCGCTCCATACCACATGAATGTTCCGCAGTCTCAAACCACTCAACACTATGTTCCTACGAATCCGCTGTACGTTGTTCCACCCATTGTCCAAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTACAAGAAATTGAAGGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGATAACTTGACTGGTCCAGCTAGTCGATGGTATATTCAATTAGATAATGCACACATTCACGTTTGGAAGGACTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACAGATGGAGAAGAAGAGTTCGGAAAGCTTCAAAGAATATGCTCAACGATGGAGAGATATGGCTGCCGAGGTTCAACCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGCAAAACTTTCCGTCATATATAAGCAATGTCTCTTATATCCCTTATAATAGCTATGTACTAGCCCATACCGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCTCAACCATTTGTAAAGCGTCAAGAAAAAAAGGTGCAATCTCTAATTAATGCTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAAGCCGAATGTCAATGAAAATCCACTGTCTGATCATGAAAATCCAAAAGTTAACGTTGTGGATAGCCTTGTTGAAAAGTGCAAAAGTGAAGTCCATGAGATAGTGATGCCTATGGAAGCACTTTTTGAAGGTCTTTTTGAAGCAGGATATGTTAGTCATGAATATCTAGACCCTAACATAAGATATGAAGGGTATGATGAAAGCAGACATTGTATATTCCATCAAGGAGTTGCAGGCCACGTTGTCCAACAATGCCAAAAATTTAGATCCAAAGTACAACAACTTATGGATTCAAAGATACTCACGGTATATAGAGGACAAGGAAAAGACGAGATGAAAGACAGTAAAATATGTGCTTTAATGGATGAAGTTTCAGAAAAGAAAGATTCCTTTTTACCAAGACCTTTGACAGTTTTTTATCAAGAAAGTCATAATGAGTCAACCAGCTTTTGCAATCTTAAAAAACTCACGATCCAAGTGCCGAGTCCTTTCAAATTTAAGGATCTAAAAGCAGTGCCATGGTGGTATGATTGTCAGGTCATAACAGGTCCTTCAGTTGATAACATTACAGGAATCAGCGGGATAACCCGAAGTGGAAGATGCTACAAACCAGATAACTTAACAGTCCCTTTAGATGGTCTAATACTAGAGCAAG

Protein sequence

MGKGKVLVDTTQSSNPIQDTDDPIYPPRFAPYHMNVPQSQTTQHYVPTNPLYVVPPIVQGIEHLEAQAKIQDMGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCLDNLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGKHKSIFGQRKYEQNFPSYISNVSYIPYNSYVLAHTVSETPKPVNSNSPQPFVKRQEKKVQSLINAGWLSFKKSGEKPNVNENPLSDHENPKVNVVDSLVEKCKSEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNLKKLTIQVPSPFKFKDLKAVPWWYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPLDGLILEQ
BLAST of MELO3C026351 vs. TrEMBL
Match: A0A061F6H8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031483 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56
Identity = 153/462 (33.12%), Postives = 223/462 (48.27%), Query Frame = 1

Query: 65  EAQAKIQDMGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCL------------- 124
           + + K   +   +N    +K ++ EERL+ IEG  +Y ++DA +L L             
Sbjct: 466 QEKLKCGTVESKDNFDTHKKFELFEERLRMIEGMGMYCSMDAIELYLAPDVVILPKFKVP 525

Query: 125 -----DNLTGPASR--WYIQLDNAHIHVWKDLADAFLKQ-----YKHNIDMAPDRLDLQQ 184
                D    P +    Y +   A+ H  K     F        YKH  DMAPD L LQ 
Sbjct: 526 DFEKYDGTKCPVTHITMYCRRMAAYAHNGKLFIHCFQDSLTGAAYKHVTDMAPDHLSLQN 585

Query: 185 MEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGKHKSIFGQRK 244
           M+KK +ESFKEYAQ+WR++A++VQPPL +K+ T MF+NTLRAP+YER++G     F   +
Sbjct: 586 MKKKPTESFKEYAQKWRNVASQVQPPLIEKKTTVMFVNTLRAPYYERLVGSATKNFADMR 645

Query: 245 YEQNFPSYISNVSYIPYNSYVLAHTVSETPKPVNSNSPQPFVKRQEKKVQSLINAGWLSF 304
           +   F       +Y  Y+  +  H++                   + KVQ LI AG L+F
Sbjct: 646 WYDTF-------TYCDYHYGIEGHSIEN-------------CTTFKHKVQGLIKAGILNF 705

Query: 305 KKSGEKPNVNENPLSDHENPKVNVVDSLVEKCKSEVHEIVMPMEALFEGLFEAGYVSHEY 364
           +K   K NVN N L +H    VN ++  V   K  + E+  PME +FE L +A  +    
Sbjct: 706 EKK-PKQNVNNNLLPNHAGAGVNAIEREV-YVKRNIREVETPMEKVFEALVKANMLEVWP 765

Query: 365 LDPNIRYEGYDESRHCIFHQGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDS 424
             PN+      +   C++H+G  GH++  C  FR  VQ++MD   +  Y      E  +S
Sbjct: 766 KCPNVNDSRDIQRLCCLYHKGCVGHLIHDCSSFRKDVQRMMDESRIEFYM-----EASES 825

Query: 425 KICALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNLKKLTIQVPSPFKFKDLKAVPWW 484
            +  + +E +        +PLT+FY E   E        K+ I+VP PF +K+ KAVPW 
Sbjct: 826 AVNMISNESTHPMKI---KPLTIFY-EPIREFVEDRTHAKMIIEVPKPFPYKNDKAVPWN 885

Query: 485 YDCQVITGPS----------VDNITGISGITRSGRCYKPDNL 492
           Y+C V    +            NIT + GITRSG CY P  L
Sbjct: 886 YNCSVQVSKAEKWIAESQNDAANITSVGGITRSGHCYSPKAL 896

BLAST of MELO3C026351 vs. TrEMBL
Match: S1SIR9_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_046184 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.1e-41
Identity = 105/281 (37.37%), Postives = 146/281 (51.96%), Query Frame = 1

Query: 3   KGKVLVDTTQSSNPIQDTD---DPIYPPRFAP---YHMNVPQSQTTQH------------ 62
           KGK    ++ +   IQ T+   DP+YPP F P    + ++P     Q+            
Sbjct: 265 KGKKAAGSSGTPEDIQQTETNTDPMYPPGFTPPPARNASIPMPSVGQYPFFGMPIGPPPT 324

Query: 63  YVPTNPLYVVPP----IVQGIEHLEAQAKIQ--DMGQNENTPAKQKLDVLEERLQEIEGT 122
           Y    P+    P     V  ++  + Q K++   +   +N    +K D+ EERL+ +EG 
Sbjct: 325 YAQQRPIGGASPSDPIFVPDLDDPKEQEKLKCGSVESKDNPDTHKKFDLFEERLRMVEGM 384

Query: 123 DVYGNIDATQLCL----------------------------------------------- 182
            +Y ++DA +LCL                                               
Sbjct: 385 GMYCSMDAIELCLVPDVVIPPKFKVSDFEKYDGTKCPVTHITMYCRRMAANAHDDKLLIH 444

Query: 183 ---DNLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESF 210
              D+LTG A++WY+QLD   IH WKDLA AF+ QYKH  DMAPDRL LQ MEKK++ESF
Sbjct: 445 CFQDSLTGAAAKWYVQLDRNRIHTWKDLARAFVAQYKHVTDMAPDRLSLQNMEKKTTESF 504

BLAST of MELO3C026351 vs. TrEMBL
Match: A0A061FBD9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_033215 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 101/216 (46.76%), Postives = 124/216 (57.41%), Query Frame = 1

Query: 1   MGKGKVLVDTTQ--SSNPIQDT----DDPIYPPRFAPYHMNVPQSQTTQHYVPTNPLYVV 60
           + KGK  ++      + P QD+    DDP YPP F P H    Q    Q  V  +  Y  
Sbjct: 68  LSKGKRAIEEPAPLENPPAQDSENQRDDPSYPPGFTPPHAQTSQRDHPQ--VMPSIYYNA 127

Query: 61  PPIVQGIEHLEAQAKIQD-MGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCLDN 120
           PP    + H   Q +    +G N   P              I   D+    +  +L  D+
Sbjct: 128 PP---PLGHQPTQGQFGPYLGINPAEP--------------IHVPDLDDPKEQEKLRKDS 187

Query: 121 LTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQ 180
           LTG A+RWY+QLD   I  WKDLA AF+ QYKH  ++APDRL LQ MEKK SE+FKEYAQ
Sbjct: 188 LTGSAARWYVQLDRNRIKTWKDLARAFIAQYKHVAELAPDRLSLQTMEKKQSENFKEYAQ 247

Query: 181 RWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIG 210
           RWRD AA+VQPPLTDKEMT +F+NTLRAPFYER+IG
Sbjct: 248 RWRDTAAQVQPPLTDKEMTVLFINTLRAPFYERLIG 264

BLAST of MELO3C026351 vs. TrEMBL
Match: A0A061FBD9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_033215 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.2e-15
Identity = 54/156 (34.62%), Postives = 84/156 (53.85%), Query Frame = 1

Query: 267 KVQSLINAGWLSFKKSGEKPNVNENPLSDHENPKVNVV-DSLVEKCKSEVHEIVMPMEAL 326
           KVQ+LI AG L+F K  +  NV+ NPL +H  P VN + + ++ + K  V+EI  PM+ +
Sbjct: 455 KVQALIKAGLLNFAKK-DNSNVDGNPLPNHGGPTVNAIHERMIRRVKKNVNEIRTPMDRV 514

Query: 327 FEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGHVVQQCQKFRSKVQQLMDSKIL 386
           FE L +   ++ + ++  I+  G+D +  C FH GV GH +Q C  FR K+Q+LMD   +
Sbjct: 515 FEALSKIKAITPKPIE--IKEVGHDLTLSCKFHMGVVGHSIQNCDGFRLKLQELMDLSEI 574

Query: 387 TVYRGQGKDEMKDSKI-----------CALMDEVSE 411
             Y    ++E     I           C   DEV++
Sbjct: 575 EFYEESEEEEFWKKTIPFLYETFRFVGCKASDEVNQ 607


HSP 2 Score: 165.2 bits (417), Expect = 2.0e-37
Identity = 93/218 (42.66%), Postives = 125/218 (57.34%), Query Frame = 1

Query: 12  QSSNPIQDTDDPIYPPRFAPYHMNVP-QSQTTQHYVPTNPL--YVVPPIVQGIEHLEAQA 71
           Q    +Q T   + P     Y   VP Q Q +      NP   Y    +  GIEH+++  
Sbjct: 28  QPPTQMQPTQPEVSPMNVTSYKYQVPYQPQNSNFINQENPYQTYGGYQLTSGIEHVQSSE 87

Query: 72  KIQDMGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCL-----------DNLTGP 131
           K+Q               +LEERL+ +EG   Y  I+A  LCL           D+LTG 
Sbjct: 88  KLQ---------------MLEERLKVVEGGS-YDIIEAVDLCLVPDIELPPKFKDSLTGA 147

Query: 132 ASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRD 191
           A  WY+ L+ A+I  WKDLADAFLKQYK+N+DM PDR +L  M KK  E+FKEY QRWR+
Sbjct: 148 ALNWYMHLERAYIRSWKDLADAFLKQYKYNLDMVPDRFELHNMSKKDGETFKEYTQRWRE 207

Query: 192 MAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGKHKSIF 216
           +AA+V+ PL+D+E  ++F++TLRAPFY++MIG   S F
Sbjct: 208 VAAQVELPLSDRETVALFIDTLRAPFYDKMIGNISSNF 229

BLAST of MELO3C026351 vs. TrEMBL
Match: A0A151QPQ4_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_047143 PE=4 SV=1)

HSP 1 Score: 42.0 bits (97), Expect = 2.6e+00
Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 1

Query: 267 KVQSLINAGWLSFKKSGEKPNVNENPLSDHENPKVNVVD 306
           KVQSL  AGWL+FK+  +  N+  NPL  H  P VN V+
Sbjct: 416 KVQSLTKAGWLNFKE--DNSNIGNNPLPGHGGPTVNSVE 452


HSP 2 Score: 160.2 bits (404), Expect = 6.4e-36
Identity = 108/313 (34.50%), Postives = 153/313 (48.88%), Query Frame = 1

Query: 77  ENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCL-----------DNLTGPASRWYIQL 136
           E   + +KL +LEERL+ +EG   Y   +A  LCL           D+LT  A  WY+ L
Sbjct: 39  EQVKSSEKLQMLEERLKVVEGGS-YDVGEAFDLCLVPDIEFPPKFKDSLTRVALNWYMHL 98

Query: 137 DNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDMAAEVQPP 196
           + A+I  WKDL D FLKQYK+N+DM PDR +L+ M KK  E+FKEYAQRWR++AA+V+P 
Sbjct: 99  ERAYIRSWKDLVDVFLKQYKYNLDMVPDRFELRNMSKKDGETFKEYAQRWREVAAQVEPL 158

Query: 197 LTDKEMTSMFMNTLRAPFYERMIGKHKSIFGQRKYEQNFPSYISNVSYIPYNSYVLAHTV 256
           L+D+EM ++F++TLRAPFY++MIG             N  S  SN+             +
Sbjct: 159 LSDREMVALFIDTLRAPFYDKMIG-------------NISSNFSNI------------VI 218

Query: 257 SETPKPVNSNSPQPFVKRQEKKVQSLINAGWLSFKKSGEKPNVNENPLSDH-ENPKVNVV 316
            E        S +  V   E      ++ G    KK G+   V  N L  + E   + + 
Sbjct: 219 IEERIENGMRSGKIAVDSTEIAGSRKVSNG-AGKKKEGDTNAVTFNSLRSYTELFPLLLQ 278

Query: 317 DSLVEKCKSEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGH 376
           +SLV  C  +  E   P                          GYD +  C +H G  GH
Sbjct: 279 NSLVVPCPMKPIEPPYP-------------------------RGYDINAKCDYHAGAIGH 299

Query: 377 VVQQCQKFRSKVQ 378
            ++ C+  ++KVQ
Sbjct: 339 SIENCRALKTKVQ 299

BLAST of MELO3C026351 vs. NCBI nr
Match: gi|659072252|ref|XP_008464418.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103502308 [Cucumis melo])

HSP 1 Score: 471.9 bits (1213), Expect = 1.4e-129
Identity = 257/402 (63.93%), Postives = 272/402 (67.66%), Query Frame = 1

Query: 1   MGKGKVLVDTTQSSNPIQDTDDPIYPPRFAPYHMNVPQSQTTQHYVPTNPLYVVPPIVQG 60
           MGKGKV+VDT QSSNPIQDTDDPIYPP F  YHMN+PQSQTTQHYVP NPLYVVPPIV  
Sbjct: 1   MGKGKVVVDTAQSSNPIQDTDDPIYPPGFTLYHMNIPQSQTTQHYVPMNPLYVVPPIVPN 60

Query: 61  IEHLEAQAKIQDMGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCL--------- 120
           IEHLEA+AKIQDMGQN+NTPAKQKLDVLE+RL+ IEGTDVYGNIDATQLCL         
Sbjct: 61  IEHLEARAKIQDMGQNKNTPAKQKLDVLEKRLRTIEGTDVYGNIDATQLCLVPGLIIPAK 120

Query: 121 -----------------------------------------DNLTGPASRWYIQLDNAHI 180
                                                    D+LTG ASRWYIQLDNAHI
Sbjct: 121 LKVPKFDKYDGSTFPRSHIIMYCRKMATHINNDRLLVHCFQDSLTGLASRWYIQLDNAHI 180

Query: 181 HVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDMAAEVQPPLTDKE 240
           HV KDL DA+LKQYKHNIDM PDRLDLQ+M+KKSS+SF EYAQRWRDM AEVQPPLTDKE
Sbjct: 181 HVXKDLVDAYLKQYKHNIDMTPDRLDLQRMKKKSSKSFNEYAQRWRDMTAEVQPPLTDKE 240

Query: 241 MTSMFMNTLRAPFYERMIGKHKSIFGQRKYEQNFPSYISNVSYIPYNSYVLAHTVSETPK 300
           MTSMFMNTLRAPFYERMIG   +         NF   I N   I Y    + H     P 
Sbjct: 241 MTSMFMNTLRAPFYERMIGNAST---------NFSDIIVNGERIEYG---IKHGRLIEPT 300

Query: 301 PVNSNSPQPFVKRQEKKVQSLINAGWLSFKKSGEKPNVNENPLSDHENPKVNVVDSLVEK 353
                                I  G +S KK GE PNVNENPL DHENPKVN VD LVEK
Sbjct: 301 TEYGG----------------IKKGTISKKKEGE-PNVNENPLPDHENPKVNAVDGLVEK 360

BLAST of MELO3C026351 vs. NCBI nr
Match: gi|659072252|ref|XP_008464418.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103502308 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-24
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 1

Query: 436 NLKKLTIQVPSPFKFKDLKAVPWWYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPL 495
           N++   IQV SPFKFKDLKAVPWWYD QVITGPSVDN+TGISGITRSGRCYKP+NLTVP 
Sbjct: 364 NIRYEGIQVSSPFKFKDLKAVPWWYDFQVITGPSVDNVTGISGITRSGRCYKPNNLTVPS 423

Query: 496 DGLILEQ 503
           DGLILEQ
Sbjct: 424 DGLILEQ 430


HSP 2 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 193/265 (72.83%), Postives = 200/265 (75.47%), Query Frame = 1

Query: 1   MGKGKVLVDTTQSSNPIQDTDDPIYPPRFAPYHMNVPQSQTTQHYVPTNPLYVVPPIVQG 60
           MGKGKV VDT QSSNPIQDTDD IYPP F PYHMNVPQSQT QHYVPTNPLYVVPPIV G
Sbjct: 31  MGKGKVAVDTAQSSNPIQDTDDHIYPPGFTPYHMNVPQSQTIQHYVPTNPLYVVPPIVPG 90

Query: 61  IEHLEAQAKIQDMGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCL--------- 120
           IEHLEAQAKIQDMGQNENTPAKQKLDVLEERL+ IEGTDVYGNIDATQLCL         
Sbjct: 91  IEHLEAQAKIQDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDATQLCLVPDLIIPAK 150

Query: 121 -----------------------------------------DNLTGPASRWYIQLDNAHI 180
                                                    D+LTGPASRWYIQLDNAHI
Sbjct: 151 FKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSLTGPASRWYIQLDNAHI 210

Query: 181 HVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDMAAEVQPPLTDKE 216
           H+WKDLADAFLKQYKHNIDMAP+RLDLQ+MEKKSSESFKEYAQRW+DM  EVQPPL DKE
Sbjct: 211 HIWKDLADAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWKDMTVEVQPPLIDKE 270

BLAST of MELO3C026351 vs. NCBI nr
Match: gi|659131252|ref|XP_008465589.1| (PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 4.6e-19
Identity = 50/62 (80.65%), Postives = 53/62 (85.48%), Query Frame = 1

Query: 209 GKHKSIFGQRKYEQNFPSYISNVSYIPYNSYVLAHTVSETPKPVNSNSPQPFVKRQEKKV 268
           GKHKSIFGQRKYEQNFPSYISNVS+IPYNSYV AHTVSE PK  NSNSP+PFV+ Q  K 
Sbjct: 346 GKHKSIFGQRKYEQNFPSYISNVSHIPYNSYVPAHTVSEAPKLFNSNSPRPFVQGQGSKT 405

Query: 269 QS 271
            S
Sbjct: 406 NS 407


HSP 2 Score: 375.2 bits (962), Expect = 1.8e-100
Identity = 190/265 (71.70%), Postives = 201/265 (75.85%), Query Frame = 1

Query: 1   MGKGKVLVDTTQSSNPIQDTDDPIYPPRFAPYHMNVPQSQTTQHYVPTNPLYVVPPIVQG 60
           MGKGKV VDT Q SNPIQDTDDPIYPP F PYHMNVPQSQTTQHY+PTNPLYVVPPIV G
Sbjct: 31  MGKGKVAVDTAQLSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYIPTNPLYVVPPIVPG 90

Query: 61  IEHLEAQAKIQDMGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCL--------- 120
           +EHLEAQAKIQDMGQN+NT AKQKLD+LEERL+ IEGTDVYGNIDATQLCL         
Sbjct: 91  VEHLEAQAKIQDMGQNKNTLAKQKLDILEERLRAIEGTDVYGNIDATQLCLVPGLIIPAK 150

Query: 121 -----------------------------------------DNLTGPASRWYIQLDNAHI 180
                                                    D+L GPASRWYIQLDNAHI
Sbjct: 151 FKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSLIGPASRWYIQLDNAHI 210

Query: 181 HVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDMAAEVQPPLTDKE 216
           HVWKDLADAFLKQ+KHNIDMAPDRL+LQ+MEKKSSESFKEY QRWRDMAAEVQPPLT+KE
Sbjct: 211 HVWKDLADAFLKQHKHNIDMAPDRLNLQRMEKKSSESFKEYTQRWRDMAAEVQPPLTNKE 270

BLAST of MELO3C026351 vs. NCBI nr
Match: gi|659093704|ref|XP_008447672.1| (PREDICTED: uncharacterized protein LOC103490082 [Cucumis melo])

HSP 1 Score: 326.6 bits (836), Expect = 7.4e-86
Identity = 191/327 (58.41%), Postives = 207/327 (63.30%), Query Frame = 1

Query: 1   MGKGKVLVDTTQSSNPIQDTDDPIYPPRFAPYHMNVPQSQTTQHYVPTNPLYVVPPIVQG 60
           MGKGKV+VDT QSSNPIQDTDDPI+PP F PYHMNVPQ +T                   
Sbjct: 31  MGKGKVVVDTIQSSNPIQDTDDPIFPPGFTPYHMNVPQYRT------------------- 90

Query: 61  IEHLEAQAKIQDMGQNENTPAKQKLDVLEERLQEIEGTDVYGNIDATQLCL--------- 120
                 QAKIQDMGQNENTPAKQKLDVLEERL+ IEGT+VYGNIDATQLCL         
Sbjct: 91  ---FGTQAKIQDMGQNENTPAKQKLDVLEERLRAIEGTEVYGNIDATQLCLVSGLIIPAK 150

Query: 121 ---------DNLTGP--------------------------------ASRWYIQLDNA-- 180
                    D  T P                                ASRWYIQ      
Sbjct: 151 FKVPEFDKYDGSTCPRSHLIMYCRKIAAHINNDKLLVHCFQDSLTGSASRWYIQ---LDN 210

Query: 181 -HIHVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDMAAEVQPPLT 240
            HIHVWKDLADAFLKQYKH+IDMAPDRLDLQ+MEKKSS+SFKEYAQRWRDMAAEVQPPLT
Sbjct: 211 AHIHVWKDLADAFLKQYKHSIDMAPDRLDLQRMEKKSSKSFKEYAQRWRDMAAEVQPPLT 270

Query: 241 DKEMTSMFMNTLRAPFYERMIGKHKSIFGQRKYEQNFPSYI---SNVSY-IPYNSYVLAH 271
           +KEMTSMFMNTLRAPFYER+IG   +         NF   I     + Y I + SYV AH
Sbjct: 271 NKEMTSMFMNTLRAPFYERVIGNAST---------NFSDIIVIGEKIEYGIKHGSYVPAH 323

BLAST of MELO3C026351 vs. NCBI nr
Match: gi|659123179|ref|XP_008461534.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103500105 [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 1.5e-78
Identity = 160/232 (68.97%), Postives = 169/232 (72.84%), Query Frame = 1

Query: 34  MNVPQSQTTQHYVPTNPLYVVPPIVQGIEHLEAQAKIQDMGQNENTPAKQKLDVLEERLQ 93
           MNV QSQTTQHYVPTNPLYVVPPIV GIEHLEAQAKIQDMGQN NT AKQKLDVLEERL+
Sbjct: 1   MNVLQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKIQDMGQNVNTLAKQKLDVLEERLR 60

Query: 94  EIEGTDVYGNIDATQLCL------------------------------------------ 153
            IEGTDVY NIDATQLCL                                          
Sbjct: 61  AIEGTDVYRNIDATQLCLVSGLIIPEKFKVPEFDKYDGSTCPRIHLIMYCRKMVAHINND 120

Query: 154 --------DNLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQQMEKK 213
                   D+LTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQ+M+KK
Sbjct: 121 KLLVHCFQDSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMKKK 180

Query: 214 SSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGKHKSIF 216
           SS+SFKEYAQ  RD+A E+QPPLT+KEMTSMFMNTLRAPFYERMIG   + F
Sbjct: 181 SSKSFKEYAQXXRDIAVELQPPLTEKEMTSMFMNTLRAPFYERMIGNASTNF 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A061F6H8_THECC3.3e-5633.12Uncharacterized protein OS=Theobroma cacao GN=TCM_031483 PE=4 SV=1[more]
S1SIR9_THECC5.1e-4137.37Gag-pro-like protein OS=Theobroma cacao GN=TCM_046184 PE=4 SV=1[more]
A0A061FBD9_THECC1.1e-3846.76Uncharacterized protein OS=Theobroma cacao GN=TCM_033215 PE=4 SV=1[more]
A0A061FBD9_THECC8.2e-1534.62Uncharacterized protein OS=Theobroma cacao GN=TCM_033215 PE=4 SV=1[more]
A0A151QPQ4_CAJCA2.6e+0051.28Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_047143 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659072252|ref|XP_008464418.1|1.4e-12963.93PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103502308 [Cucumis me... [more]
gi|659072252|ref|XP_008464418.1|2.1e-2485.07PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103502308 [Cucumis me... [more]
gi|659131252|ref|XP_008465589.1|4.6e-1980.65PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo][more]
gi|659093704|ref|XP_008447672.1|7.4e-8658.41PREDICTED: uncharacterized protein LOC103490082 [Cucumis melo][more]
gi|659123179|ref|XP_008461534.1|1.5e-7868.97PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103500105 [Cucumis me... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026351T1MELO3C026351T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 113..200
score: 1.6

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026351Bottle gourd (USVL1VR-Ls)lsimeB155
MELO3C026351Bottle gourd (USVL1VR-Ls)lsimeB161
MELO3C026351Silver-seed gourdcarmeB0481
MELO3C026351Wax gourdmewgoB647