MELO3C026294.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C026294.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptioncharged multivesicular body protein 7 isoform X2
Locationchr02 : 26157582 .. 26157767 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTGTTTAAGAAGTTCGAGTTGGAATTAACAACATGCCAAATCCTTGACGTGTCGACATCAGAACCTGCGATTAATATTGCAACTGGTGAAACAGTGGCTACAGTTTGTGACGATTCATCAAGCTCTGCGTTATCAAATCTAAAGCTAGCTGAAGAAGCTGAAAAAGAGAATGCAAACTAG

mRNA sequence

ATGGAGGTGTTTAAGAAGTTCGAGTTGGAATTAACAACATGCCAAATCCTTGACGTGTCGACATCAGAACCTGCGATTAATATTGCAACTGGTGAAACAGTGGCTACAGTTTGTGACGATTCATCAAGCTCTGCGTTATCAAATCTAAAGCTAGCTGAAGAAGCTGAAAAAGAGAATGCAAACTAG

Coding sequence (CDS)

ATGGAGGTGTTTAAGAAGTTCGAGTTGGAATTAACAACATGCCAAATCCTTGACGTGTCGACATCAGAACCTGCGATTAATATTGCAACTGGTGAAACAGTGGCTACAGTTTGTGACGATTCATCAAGCTCTGCGTTATCAAATCTAAAGCTAGCTGAAGAAGCTGAAAAAGAGAATGCAAACTAG

Protein sequence

MEVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKENAN
Homology
[Close]
BLAST of MELO3C026294.2 vs. NCBI nr
Match: XP_008466425.1 (PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466434.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466443.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466452.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466460.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-14
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKENAN 61
           EVFKK ELELT  QILD STSE A+NIATGETV  VCDDS SS LSNLKL EE EKE+AN
Sbjct: 366 EVFKKLELELTAAQILDASTSESAVNIATGETVVVVCDDSLSSTLSNLKLVEEVEKEDAN 425

[Close]
BLAST of MELO3C026294.2 vs. NCBI nr
Match: XP_008466468.1 (PREDICTED: charged multivesicular body protein 7 isoform X2 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-14
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKENAN 61
           EVFKK ELELT  QILD STSE A+NIATGETV  VCDDS SS LSNLKL EE EKE+AN
Sbjct: 363 EVFKKLELELTAAQILDASTSESAVNIATGETVVVVCDDSLSSTLSNLKLVEEVEKEDAN 422

[Close]
BLAST of MELO3C026294.2 vs. NCBI nr
Match: XP_004151427.1 (PREDICTED: charged multivesicular body protein 7 [Cucumis sativus] >XP_011654554.1 PREDICTED: charged multivesicular body protein 7 [Cucumis sativus] >KGN49777.1 hypothetical protein Csa_5G118690 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-13
Identity = 46/60 (76.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKENAN 61
           E FKK ELELT  QILD STSE  +NIATGETVA VCDDS S+ALSNLKL EE EKEN N
Sbjct: 365 EEFKKLELELTAGQILDASTSESGVNIATGETVAAVCDDSLSTALSNLKLVEETEKENGN 424

[Close]
BLAST of MELO3C026294.2 vs. NCBI nr
Match: XP_023551290.1 (charged multivesicular body protein 7 [Cucurbita pepo subsp. pepo] >XP_023551291.1 charged multivesicular body protein 7 [Cucurbita pepo subsp. pepo] >XP_023551292.1 charged multivesicular body protein 7 [Cucurbita pepo subsp. pepo] >XP_023551293.1 charged multivesicular body protein 7 [Cucurbita pepo subsp. pepo] >XP_023551294.1 charged multivesicular body protein 7 [Cucurbita pepo subsp. pepo] >XP_023551295.1 charged multivesicular body protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-06
Identity = 37/57 (64.91%), Postives = 41/57 (71.93%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKE 59
           E FKK ELE+   Q LD STS+  +NIATG  VATV DDS S+ALSNLKL EE  KE
Sbjct: 365 EEFKKLELEVAG-QNLDASTSDTGVNIATGNQVATVSDDSLSAALSNLKLVEETGKE 420

[Close]
BLAST of MELO3C026294.2 vs. NCBI nr
Match: XP_022938857.1 (charged multivesicular body protein 7 [Cucurbita moschata] >XP_022938858.1 charged multivesicular body protein 7 [Cucurbita moschata] >XP_022938859.1 charged multivesicular body protein 7 [Cucurbita moschata] >XP_022938860.1 charged multivesicular body protein 7 [Cucurbita moschata] >XP_022938861.1 charged multivesicular body protein 7 [Cucurbita moschata])

HSP 1 Score: 58.5 bits (140), Expect = 8.9e-06
Identity = 37/57 (64.91%), Postives = 40/57 (70.18%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKE 59
           E FKK ELE+   Q LD STS+   NIATG  VATV DDS S+ALSNLKL EE  KE
Sbjct: 365 EEFKKLELEVAG-QNLDASTSDTGANIATGNQVATVSDDSLSAALSNLKLVEETGKE 420

[Close]
BLAST of MELO3C026294.2 vs. TrEMBL
Match: tr|A0A1S3CRA4|A0A1S3CRA4_CUCME (charged multivesicular body protein 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503835 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-14
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKENAN 61
           EVFKK ELELT  QILD STSE A+NIATGETV  VCDDS SS LSNLKL EE EKE+AN
Sbjct: 366 EVFKKLELELTAAQILDASTSESAVNIATGETVVVVCDDSLSSTLSNLKLVEEVEKEDAN 425

[Close]
BLAST of MELO3C026294.2 vs. TrEMBL
Match: tr|A0A1S3CRC5|A0A1S3CRC5_CUCME (charged multivesicular body protein 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503835 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-14
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKENAN 61
           EVFKK ELELT  QILD STSE A+NIATGETV  VCDDS SS LSNLKL EE EKE+AN
Sbjct: 363 EVFKKLELELTAAQILDASTSESAVNIATGETVVVVCDDSLSSTLSNLKLVEEVEKEDAN 422

[Close]
BLAST of MELO3C026294.2 vs. TrEMBL
Match: tr|A0A0A0KMY2|A0A0A0KMY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G118690 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-13
Identity = 46/60 (76.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 2   EVFKKFELELTTCQILDVSTSEPAINIATGETVATVCDDSSSSALSNLKLAEEAEKENAN 61
           E FKK ELELT  QILD STSE  +NIATGETVA VCDDS S+ALSNLKL EE EKEN N
Sbjct: 365 EEFKKLELELTAGQILDASTSESGVNIATGETVAAVCDDSLSTALSNLKLVEETEKENGN 424

The following BLAST results are available for this feature:
BLAST of MELO3C026294.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466425.13.1e-1478.33PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_0... [more]
XP_008466468.13.1e-1478.33PREDICTED: charged multivesicular body protein 7 isoform X2 [Cucumis melo][more]
XP_004151427.12.0e-1376.67PREDICTED: charged multivesicular body protein 7 [Cucumis sativus] >XP_011654554... [more]
XP_023551290.13.1e-0664.91charged multivesicular body protein 7 [Cucurbita pepo subsp. pepo] >XP_023551291... [more]
XP_022938857.18.9e-0664.91charged multivesicular body protein 7 [Cucurbita moschata] >XP_022938858.1 charg... [more]
BLAST of MELO3C026294.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C026294.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C026294.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CRA4|A0A1S3CRA4_CUCME2.0e-1478.33charged multivesicular body protein 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A1S3CRC5|A0A1S3CRC5_CUCME2.0e-1478.33charged multivesicular body protein 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A0A0KMY2|A0A0A0KMY2_CUCSA1.3e-1376.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G118690 PE=3 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026294.2.1MELO3C026294.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026294.2Wax gourdmedwgoB280
MELO3C026294.2Wax gourdmedwgoB291
MELO3C026294.2Cucumber (Gy14) v2cgybmedB043
MELO3C026294.2Cucurbita moschata (Rifu)cmomedB116
MELO3C026294.2Cucurbita moschata (Rifu)cmomedB117
MELO3C026294.2Cucumber (Gy14) v2cgybmedB037
MELO3C026294.2Cucumber (Gy14) v2cgybmedB040
MELO3C026294.2Cucumber (Gy14) v1cgymedB358
MELO3C026294.2Cucumber (Gy14) v1cgymedB359
MELO3C026294.2Cucumber (Gy14) v1cgymedB114
MELO3C026294.2Cucurbita maxima (Rimu)cmamedB068
MELO3C026294.2Cucurbita maxima (Rimu)cmamedB127
MELO3C026294.2Cucurbita maxima (Rimu)cmamedB129
MELO3C026294.2Cucurbita maxima (Rimu)cmamedB229
MELO3C026294.2Cucurbita maxima (Rimu)cmamedB428
MELO3C026294.2Watermelon (97103) v1medwmB290
MELO3C026294.2Cucurbita moschata (Rifu)cmomedB060
MELO3C026294.2Cucurbita moschata (Rifu)cmomedB120
MELO3C026294.2Cucurbita moschata (Rifu)cmomedB215
MELO3C026294.2Cucurbita pepo (Zucchini)cpemedB040
MELO3C026294.2Cucurbita pepo (Zucchini)cpemedB386
MELO3C026294.2Cucurbita pepo (Zucchini)cpemedB567
MELO3C026294.2Cucurbita pepo (Zucchini)cpemedB727
MELO3C026294.2Cucurbita pepo (Zucchini)cpemedB744
MELO3C026294.2Wild cucumber (PI 183967)cpimedB041
MELO3C026294.2Wild cucumber (PI 183967)cpimedB045
MELO3C026294.2Wild cucumber (PI 183967)cpimedB049
MELO3C026294.2Cucumber (Chinese Long) v2cumedB039
MELO3C026294.2Cucumber (Chinese Long) v2cumedB042
MELO3C026294.2Cucumber (Chinese Long) v2cumedB046
MELO3C026294.2Melon (DHL92) v3.6.1medmedB065
MELO3C026294.2Melon (DHL92) v3.6.1medmedB103
MELO3C026294.2Bottle gourd (USVL1VR-Ls)lsimedB213
MELO3C026294.2Bottle gourd (USVL1VR-Ls)lsimedB268
MELO3C026294.2Bottle gourd (USVL1VR-Ls)lsimedB419
MELO3C026294.2Bottle gourd (USVL1VR-Ls)lsimedB431
MELO3C026294.2Watermelon (Charleston Gray)medwcgB219
MELO3C026294.2Watermelon (Charleston Gray)medwcgB226
MELO3C026294.2Watermelon (Charleston Gray)medwcgB246
MELO3C026294.2Watermelon (Charleston Gray)medwcgB253
MELO3C026294.2Watermelon (Charleston Gray)medwcgB256
MELO3C026294.2Watermelon (97103) v1medwmB253
MELO3C026294.2Watermelon (97103) v1medwmB272
MELO3C026294.2Watermelon (97103) v1medwmB283
MELO3C026294.2Silver-seed gourdcarmedB0374
MELO3C026294.2Silver-seed gourdcarmedB0375
MELO3C026294.2Silver-seed gourdcarmedB0505
MELO3C026294.2Silver-seed gourdcarmedB0989
MELO3C026294.2Silver-seed gourdcarmedB1027
MELO3C026294.2Cucumber (Chinese Long) v3cucmedB044
MELO3C026294.2Cucumber (Chinese Long) v3cucmedB047
MELO3C026294.2Cucumber (Chinese Long) v3cucmedB050
MELO3C026294.2Cucumber (Chinese Long) v3cucmedB186
MELO3C026294.2Watermelon (97103) v2medwmbB220
MELO3C026294.2Watermelon (97103) v2medwmbB247
MELO3C026294.2Watermelon (97103) v2medwmbB255