MELO3C026164.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026164.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	histone-lysine N-methyltransferase ASHR1 isoform X1
Location	chr02 : 26956479 .. 26956874 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCAGAAACAAATAGAGGAACGCTTGATCGCAGCAGAGATGGAAATGGGCAGAATAAGGAAGGAACTGCAAAGGCTACCTGTGTTGAAGAGAAGGGTGGAAGTTATATCAGTGGAAATGAAAAAGGTACAGAAAATGTTGAAGCTTCTAGTGGAGAAGTTGATTCTCCAGGGAGGGAGGGAGGGAGAGAACGACTTCCACAGAGGTCGCCTCAGGGAAGAAAAAAGTTCAAGAGCAAGGAATGGGTGGCTCAGAGGCCAGAAGGATGAGGGGATGGAAGAATGTGAACTCTCATGGCAGAAGTTTGCAGATGGAGATGGGGGCAGAAGTAAGTTTAAGAAGGTCGAGAAGCCTATTTTTCAACGAAGAAGACCTAGATGGGTGGCTCTATAG

mRNA sequence

ATGACGCAGAAACAAATAGAGGAACGCTTGATCGCAGCAGAGATGGAAATGGGCAGAATAAGGAAGGAACTGCAAAGGCTACCTGTGTTGAAGAGAAGGGTGGAAGTTATATCAGTGGAAATGAAAAAGGTACAGAAAATGTTGAAGCTTCTAGTGGAGAAGTTGATTCTCCAGGGAGGGAGGGAGGGAGAGAACGACTTCCACAGAGGTCGCCTCAGGGAAGAAAAAAGTTCAAGAGCAAGGAATGGGTGGCTCAGAGGCCAGAAGGATGAGGGGATGGAAGAATGTGAACTCTCATGGCAGAAGTTTGCAGATGGAGATGGGGGCAGAAGTAAGTTTAAGAAGGTCGAGAAGCCTATTTTTCAACGAAGAAGACCTAGATGGGTGGCTCTATAG

Coding sequence (CDS)

ATGACGCAGAAACAAATAGAGGAACGCTTGATCGCAGCAGAGATGGAAATGGGCAGAATAAGGAAGGAACTGCAAAGGCTACCTGTGTTGAAGAGAAGGGTGGAAGTTATATCAGTGGAAATGAAAAAGGTACAGAAAATGTTGAAGCTTCTAGTGGAGAAGTTGATTCTCCAGGGAGGGAGGGAGGGAGAGAACGACTTCCACAGAGGTCGCCTCAGGGAAGAAAAAAGTTCAAGAGCAAGGAATGGGTGGCTCAGAGGCCAGAAGGATGAGGGGATGGAAGAATGTGAACTCTCATGGCAGAAGTTTGCAGATGGAGATGGGGGCAGAAGTAAGTTTAAGAAGGTCGAGAAGCCTATTTTTCAACGAAGAAGACCTAGATGGGTGGCTCTATAG

Protein sequence

MTQKQIEERLIAAEMEMGRIRKELQRLPVLKRRVEVISVEMKKVQKMLKLLVEKLILQGGREGENDFHRGRLREEKSSRARNGWLRGQKDEGMEECELSWQKFADGDGGRSKFKKVEKPIFQRRRPRWVAL

Homology

[Close]

BLAST of MELO3C026164.2 vs. NCBI nr
Match: ADN33859.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 250.4 bits (638), Expect = 3.4e-63
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MTQKQIEERLIAAEMEMGRIRKELQRLPVLKRRVEVISVEMKKVQKMLKLLVEKLILQGG 60
           MTQKQIEERLIAAEMEMGRIRKELQRLPVLKRRVEVISVEMKKVQKMLKLLVEKLILQGG
Sbjct: 1   MTQKQIEERLIAAEMEMGRIRKELQRLPVLKRRVEVISVEMKKVQKMLKLLVEKLILQGG 60

Query: 61  REGENDFHRGRLREEKSSRARNGWLRGQKDEGMEECELSWQKFADGDGGRSKFKKVEKPI 120
           REGENDFHRGRLREEKSSRARNGWLRGQKDEGMEECELSWQKFADGDGGRSKFKKVEKPI
Sbjct: 61  REGENDFHRGRLREEKSSRARNGWLRGQKDEGMEECELSWQKFADGDGGRSKFKKVEKPI 120

Query: 121 FQRRRPRWVAL 132
           FQRRRPRWVAL
Sbjct: 121 FQRRRPRWVAL 131

[Close]

BLAST of MELO3C026164.2 vs. TrEMBL
Match: tr|E5GBL9|E5GBL9_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-63
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MTQKQIEERLIAAEMEMGRIRKELQRLPVLKRRVEVISVEMKKVQKMLKLLVEKLILQGG 60
           MTQKQIEERLIAAEMEMGRIRKELQRLPVLKRRVEVISVEMKKVQKMLKLLVEKLILQGG
Sbjct: 1   MTQKQIEERLIAAEMEMGRIRKELQRLPVLKRRVEVISVEMKKVQKMLKLLVEKLILQGG 60

Query: 61  REGENDFHRGRLREEKSSRARNGWLRGQKDEGMEECELSWQKFADGDGGRSKFKKVEKPI 120
           REGENDFHRGRLREEKSSRARNGWLRGQKDEGMEECELSWQKFADGDGGRSKFKKVEKPI
Sbjct: 61  REGENDFHRGRLREEKSSRARNGWLRGQKDEGMEECELSWQKFADGDGGRSKFKKVEKPI 120

Query: 121 FQRRRPRWVAL 132
           FQRRRPRWVAL
Sbjct: 121 FQRRRPRWVAL 131

The following BLAST results are available for this feature:

BLAST of MELO3C026164.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33859.1	3.4e-63	100.00	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C026164.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C026164.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C026164.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBL9\|E5GBL9_CUCME	2.3e-63	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026164.2.1	MELO3C026164.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..86

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026164.2	Cucurbita moschata (Rifu)	cmomedB117
MELO3C026164.2	Cucumber (Gy14) v2	cgybmedB041
MELO3C026164.2	Cucumber (Gy14) v2	cgybmedB163
MELO3C026164.2	Cucumber (Gy14) v1	cgymedB263
MELO3C026164.2	Cucurbita maxima (Rimu)	cmamedB068
MELO3C026164.2	Cucurbita maxima (Rimu)	cmamedB129
MELO3C026164.2	Cucurbita maxima (Rimu)	cmamedB228
MELO3C026164.2	Cucurbita moschata (Rifu)	cmomedB060
MELO3C026164.2	Cucurbita moschata (Rifu)	cmomedB214
MELO3C026164.2	Cucurbita pepo (Zucchini)	cpemedB386
MELO3C026164.2	Cucurbita pepo (Zucchini)	cpemedB569
MELO3C026164.2	Cucurbita pepo (Zucchini)	cpemedB727
MELO3C026164.2	Wild cucumber (PI 183967)	cpimedB046
MELO3C026164.2	Wild cucumber (PI 183967)	cpimedB049
MELO3C026164.2	Wild cucumber (PI 183967)	cpimedB183
MELO3C026164.2	Cucumber (Chinese Long) v2	cumedB043
MELO3C026164.2	Cucumber (Chinese Long) v2	cumedB046
MELO3C026164.2	Cucumber (Chinese Long) v2	cumedB183
MELO3C026164.2	Melon (DHL92) v3.6.1	medmedB065
MELO3C026164.2	Bottle gourd (USVL1VR-Ls)	lsimedB214
MELO3C026164.2	Bottle gourd (USVL1VR-Ls)	lsimedB419
MELO3C026164.2	Watermelon (Charleston Gray)	medwcgB236
MELO3C026164.2	Watermelon (Charleston Gray)	medwcgB246
MELO3C026164.2	Watermelon (97103) v1	medwmB259
MELO3C026164.2	Watermelon (97103) v1	medwmB283
MELO3C026164.2	Silver-seed gourd	carmedB0375
MELO3C026164.2	Silver-seed gourd	carmedB0618
MELO3C026164.2	Cucumber (Chinese Long) v3	cucmedB048
MELO3C026164.2	Cucumber (Chinese Long) v3	cucmedB050
MELO3C026164.2	Cucumber (Chinese Long) v3	cucmedB187
MELO3C026164.2	Watermelon (97103) v2	medwmbB233
MELO3C026164.2	Watermelon (97103) v2	medwmbB247
MELO3C026164.2	Wax gourd	medwgoB282
MELO3C026164.2	Wax gourd	medwgoB308
MELO3C026164.2	Cucumber (Gy14) v2	cgybmedB043