MELO3C026106 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026106
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLarge subunit GTPase 1-like protein
Locationchr12 : 14232231 .. 14234708 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACCTCACTCTTCTTCTCCGGCGACACTCCGGCACCACAGGCGTAAGGCAGCGACGACTGGAGCCCACACCCACGCAAACGCCCAGCTTTGTAGTCGACGACGGTCTACGTTCAATCGGCAACTTGACTTGCATTGTGAGCACGACTCATAACCACTCCGCCTGGTTTTCGAAGCATTGTTTTTTCTCCGTTTGAAACTCCAGCGAGAACAACAAGTTGTGCATCACGTTTCCGACGGCTGGGTTTCTTGCAGCAGCATTTTTGGCTTGGGGGTAAGCTTTCGGCTGTTATTCACACTCTGTTTGGTTTCAAATTAGTGTGCCTATAACGTTTAAGGTTCACTTCTACAAGTTCGAACGTTTTAGGACACCAAACAGCAAGGGTTAGAGCCTTCTTGGTAAGATTCGTAAGGGTTTATTGCTTTAATTTCCTTTTGAGTTGGATTGAAGTGTTCAAATGCTATTCTGAACTCCTGGAACTCATTTGTTGTTATGGTTGAGTAAATTTCTAAGTACTCGATTACGGTTCAGCAAGGTTGAACACATTTCGGACTAGTTTGGACTCGATTAAAGTGTCCCTCAGTCTTTGACGTCGTAAGTTTGTTGGTTGTAGTTTTGGGTTTATTTGATGTAATTAATTAAAGTTTATGTGGATTTTGGATAAGAATATTCTGGTTGAAAAGTCTCTCGGTGTCAATTAAGGTTTTCAAACTAAGTTCTAACACTGCTTTAAGTTTTCTGAAAATTATGTTTGTTTAAGGAAGTGGATTTCTAGATCGAGAATTATAGGATTGTTGGTTGAGATAAGTAGTTTCCACATCCCATTTATAAATATATTTTTTGTTGTGATTTGATTAATGGTTGAAAGTTTGTTTTAGATCTTTGAAAGTTTGCTTTATGTGATTTGAGAATTGACTAAAATTGCTTTGTCTGCTTTGTCTGCTTTGCTAAATGAAAATATGTGATCTTTTTTGAAGTATAGTTGAAAGTGTTTCTGTTTTGGTTACTTCTGAAAACTTTTGATATAACTGAATGGTTTGATTTGATGGGTTGTTGAAATTGCCATTTGAAAACTACATATTTTGTTTCGAATGTTTTTGAATATGCCACTTTCTGTGTTTTGGGGATTGTATGATATTTTGTTGTAGCCAAATTTGGAATTGAGGGTATATGATCTCGTTGAAGCTTATTTGTGAGAAGGCCCATGTTTGTGGTTTGACATTCTTGGGAATAAAGATTCATGTATGTGTTGCTCTCACATGGCCCCACACTTATAATTTGACCTTTGACATCTTTGACTGAATGAATGATTGGTGTTATCGATGGGTAACCTTATCTGCTGTGCTACTTCAACTATGCATCTTTCCTACTTCGTGTTTGAGAGTACTCAATGACTGAAAATTTTGTTTGGATTAAAGTATTGGCTAATTGTGTTTTGTTTGATCGAAACAATTGTCCAATTGAAAAGTTTATATTTGAACGTGTGTTCAGATTTGGCGATGAGGAAGAATGATAAGATGGGGCTGGGTCGGGCTCTTGTCAAGCAACATAACCAAATGATCCAACAGTCTAAGGAGAAAGGTAGATTCTACAAATCTCAGCAGAAGAGGGTTTTGGAGTCGGTCACAGAGGTCAGTGACATTGATGCCGTTATCCAACAAGCAGATGAGGCAGAGCGCCTCTTTTCCATTGATAACCCTACTCCAAACTTTCTTATCAACTTGTAAGTTACTCTAGCTTTTCATACCTCTGAGGTTATGGATTGACAGTGTTTTGATTGAAAGTGTTGGTCCATGAGCTATAAAGTTTGATTGGGTTTTAAACATGGGAAACGGCAATAGTTTGTTTGAGTTAAGATGTTTGTCATGGGCAGATTGAAAGGTATTGATTATGAATGAAGTTTTACTAATGAATTTTGATATTGGTTTATGTGTTCTTTGCTGCTAGGGATGGAAGTTCGAGTGTAAGTGAAACGACCCTTGTGGAAAGGAGAGATCAACAAAAGATAGAGGAGGCTTTGCATGCTAGCAGTCTACGAGTTCCACGTAGGTTTGTCTTCTTATCCTTATTCCTTACCAAATTTATGCGAGTTCTGCTTTGAAAATTAGATTGTGCAGCTTCTAAATCTCTCTTTTGTTTTAGGCCACCTTGGAATGCTAGGATGTCTGTGGAGGAGCTTGATGATAATGAACGTCAGTCTTTCTTAATATGGCGTCGGAGCCTTGCAAGGTTGCTCCAATTTGAGATGTTCTTGTTTTTCTTTGATTTGTCTGGTTATAGCACGTTAAAATCTGTTAAAATCATATTTGTAAATTGTTCTCAAGTATTCTTGTTCATTGATGGCATTTTTATGTGATTATGCAAACTTTTTTAGGCTTGAGGGGAATGAAAATCTTGTTCTTACGCCATTTGAGAAAAACTTAGATATATGGAGACAGCTTTGGCGGGTTGTTGAGCGATGTGATTTGGTAAGATGA

mRNA sequence

CTTACCTCACTCTTCTTCTCCGGCGACACTCCGGCACCACAGGCGTAAGGCAGCGACGACTGGAGCCCACACCCACGCAAACGCCCAGCTTTGTAGTCGACGACGGTCTACGTTCAATCGGCAACTTGACTTGCATTGTGAGCACGACTCATAACCACTCCGCCTGGTTTTCGAAGCATTGTTTTTTCTCCGTTTGAAACTCCAGCGAGAACAACAAGTTGTGCATCACGTTTCCGACGGCTGGGTTTCTTGCAGCAGCATTTTTGGCTTGGGGATTTGGCGATGAGGAAGAATGATAAGATGGGGCTGGGTCGGGCTCTTGTCAAGCAACATAACCAAATGATCCAACAGTCTAAGGAGAAAGGTAGATTCTACAAATCTCAGCAGAAGAGGGTTTTGGAGTCGGTCACAGAGGTCAGTGACATTGATGCCGTTATCCAACAAGCAGATGAGGCAGAGCGCCTCTTTTCCATTGATAACCCTACTCCAAACTTTCTTATCAACTTGGATGGAAGTTCGAGTGTAAGTGAAACGACCCTTGTGGAAAGGAGAGATCAACAAAAGATAGAGGAGGCTTTGCATGCTAGCAGTCTACGAGTTCCACGTAGGCCACCTTGGAATGCTAGGATGTCTGTGGAGGAGCTTGATGATAATGAACGTCAGTCTTTCTTAATATGGCGTCGGAGCCTTGCAAGGCTTGAGGGGAATGAAAATCTTGTTCTTACGCCATTTGAGAAAAACTTAGATATATGGAGACAGCTTTGGCGGGTTGTTGAGCGATGTGATTTGGTAAGATGA

Coding sequence (CDS)

ATGAGGAAGAATGATAAGATGGGGCTGGGTCGGGCTCTTGTCAAGCAACATAACCAAATGATCCAACAGTCTAAGGAGAAAGGTAGATTCTACAAATCTCAGCAGAAGAGGGTTTTGGAGTCGGTCACAGAGGTCAGTGACATTGATGCCGTTATCCAACAAGCAGATGAGGCAGAGCGCCTCTTTTCCATTGATAACCCTACTCCAAACTTTCTTATCAACTTGGATGGAAGTTCGAGTGTAAGTGAAACGACCCTTGTGGAAAGGAGAGATCAACAAAAGATAGAGGAGGCTTTGCATGCTAGCAGTCTACGAGTTCCACGTAGGCCACCTTGGAATGCTAGGATGTCTGTGGAGGAGCTTGATGATAATGAACGTCAGTCTTTCTTAATATGGCGTCGGAGCCTTGCAAGGCTTGAGGGGAATGAAAATCTTGTTCTTACGCCATTTGAGAAAAACTTAGATATATGGAGACAGCTTTGGCGGGTTGTTGAGCGATGTGATTTGGTAAGATGA

Protein sequence

MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAERLFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEELDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLVR*
Homology
[Close]
BLAST of MELO3C026106 vs. Swiss-Prot
Match: LSG12_ARATH (GTPase LSG1-2 OS=Arabidopsis thaliana GN=LSG1-2 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.1e-60
Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M K++K  LGR+LVK HN MIQ+SK+KG++YK+ QK+VLESVTEVSDIDA+I+QA+EAER
Sbjct: 1   MGKSEKTSLGRSLVKHHNHMIQESKDKGKYYKNLQKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSIDNPTPNFL-INLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVE 120
           L++I++ +   L INLD +SS S     E R+QQKIEEALHASSL+VPRRPPW   MSVE
Sbjct: 61  LYTINHSSSTPLSINLDTNSSSSVIAAEEWREQQKIEEALHASSLQVPRRPPWTPEMSVE 120

Query: 121 ELDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           ELD NE+Q+FL WRR L  LE NE LVLTPFEKNLDIWRQLWRV+ER DL+
Sbjct: 121 ELDANEKQAFLNWRRMLVSLEENEKLVLTPFEKNLDIWRQLWRVLERSDLI 171

[Close]
BLAST of MELO3C026106 vs. Swiss-Prot
Match: LSG11_ARATH (GTPase LSG1-1 OS=Arabidopsis thaliana GN=LSG1-1 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-57
Identity = 116/172 (67.44%), Postives = 136/172 (79.07%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KN+K  LGRALVK HN MIQ++KEKG+ YK Q K+VLESVTEVSDIDA+I+QA+EAER
Sbjct: 1   MGKNEKTSLGRALVKHHNHMIQETKEKGKSYKDQHKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSI--DNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSV 120
           LF+I  D+ TP   IN+D  SS S  T  E ++Q+  EEALHASSL+VPRRP W  +M+V
Sbjct: 61  LFAIHHDSATP-VPINMDTGSSSSGITAKEWKEQRMREEALHASSLQVPRRPHWTPKMNV 120

Query: 121 EELDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           E+LD NE+Q+FL WRR LA LE NE LVLTPFEKNLDIWRQLWRV+ER DL+
Sbjct: 121 EKLDANEKQAFLTWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLI 171

[Close]
BLAST of MELO3C026106 vs. Swiss-Prot
Match: LSG1_DANRE (Large subunit GTPase 1 homolog OS=Danio rerio GN=lsg1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-23
Identity = 67/186 (36.02%), Postives = 97/186 (52.15%), Query Frame = 1 

Query: 3   KNDKMGLGRALVKQ---------------HNQMIQQSKEKGRFYKSQQKRVLESVTEVSD 62
           + +  GLGRAL+K+               H   +    + GR         L+SVTE S 
Sbjct: 7   RGEGSGLGRALIKERLNAGRGYRRNDTWLHTSELNDGYDWGRLN-------LQSVTEQSS 66

Query: 63  IDAVIQQADEAERLFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASS---L 122
           +D  +  A+ A   F  +       +N+    + +   L+   + +++++ LH  +   L
Sbjct: 67  LDDFLATAELAGTEFVAEK------LNIKFVPAEARAGLLSSEESRRLKK-LHEENKQLL 126

Query: 123 RVPRRPPWNARMSVEELDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVV 171
           R+PRRPPW+   S E L   E+ SFL WRR LARLE  + L+LTPFE+NLD WRQLWRV+
Sbjct: 127 RIPRRPPWDESTSPEVLQQTEKDSFLTWRRDLARLEEEQKLILTPFERNLDFWRQLWRVI 178

[Close]
BLAST of MELO3C026106 vs. Swiss-Prot
Match: LSG1_YEAST (Large subunit GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LSG1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23
Identity = 69/181 (38.12%), Postives = 102/181 (56.35%), Query Frame = 1 

Query: 2   RKN-DKMGLGRAL--VKQHNQMIQQSKEKGRFYKSQQKRV----LESVTEVSDIDAVIQQ 61
           RKN +K+ LGRA+   +Q    I+   +    + + +       L SVT+ S +D  +  
Sbjct: 21  RKNKNKLELGRAIKYARQKENAIEYLPDGEMRFTTDKHEANWVKLRSVTQESALDEFLST 80

Query: 62  ADEAERLFSIDNPTPNFLINLDG----SSSVSETTLVERRDQQKIEEALHASSLRVPRRP 121
           A  A++ F+ D  +   +I +D     ++S   +   E+R     ++   A  L VPRRP
Sbjct: 81  AALADKDFTADRHSNVKIIRMDSGNDSATSQGFSMTNEQRGNLNAKQRALAKDLIVPRRP 140

Query: 122 PWNARMSVEELDDNERQSFLIWRRSLARL-EGNENLVLTPFEKNLDIWRQLWRVVERCDL 171
            WN  MS  +LD  E+++FL WRR LA L E NE+L+LTPFE+N+++W+QLWRVVER DL
Sbjct: 141 EWNEGMSKFQLDRQEKEAFLEWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDL 200

[Close]
BLAST of MELO3C026106 vs. Swiss-Prot
Match: LSG1_BOVIN (Large subunit GTPase 1 homolog OS=Bos taurus GN=LSG1 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.4e-22
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 1 

Query: 9   LGRALVKQHNQMIQQSKEKGRFYKSQQ--------KRVLESVTEVSDIDAVIQQADEAER 68
           LGRAL++Q  Q  +  +    +  + +        +  L+SVTE S +D  +  A+ A  
Sbjct: 12  LGRALIRQQVQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAELAGT 71

Query: 69  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASS---LRVPRRPPWNARMS 128
            F  +       +N+      + T L+   + Q+I++ LH  +   L +PRRP W+ + S
Sbjct: 72  EFVAEK------LNIKFVPPEARTGLLSFEENQRIKK-LHEENKQFLCIPRRPKWDQKTS 131

Query: 129 VEELDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
            EEL   E+ +FL WRR L  LE  +NL+LTPFE+NLD WRQLWRV+ER D+V
Sbjct: 132 PEELKQAEKDNFLEWRRQLVWLEEEQNLILTPFERNLDFWRQLWRVIERSDIV 177

[Close]
BLAST of MELO3C026106 vs. TrEMBL
Match: A0A0A0LYK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181280 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.5e-88
Identity = 165/170 (97.06%), Postives = 168/170 (98.82%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           MR+NDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQK+VLESVTEVSDIDAVIQQADEAER
Sbjct: 1   MRRNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSIDNPTPNFLINLDGSSSVSE TLVERRDQQKIEEALHASSLRVPRRPPWNARMS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDL+
Sbjct: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLL 170

[Close]
BLAST of MELO3C026106 vs. TrEMBL
Match: A0A0A0L3T4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499330 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.8e-85
Identity = 160/170 (94.12%), Postives = 164/170 (96.47%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQK+VLESVTEVSDIDAVIQQADEAER
Sbjct: 1   MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSIDNPTPNFLINLDGSSS+SE T  ERR+QQKIEEALHASSLRVPRRPPWNARMS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LDDNERQSFLIWRRSLARLE NENLVLTPFEKNLDIWRQLWRVVERCDL+
Sbjct: 121 LDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLL 170

[Close]
BLAST of MELO3C026106 vs. TrEMBL
Match: A0A061GZM1_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_041217 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.5e-69
Identity = 136/170 (80.00%), Postives = 150/170 (88.24%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KN+K GLGRAL+K HN MIQQSKEKGRFYKSQ K+VLESVTEVSDIDAVI+QA+EA++
Sbjct: 1   MGKNEKTGLGRALMKHHNSMIQQSKEKGRFYKSQHKKVLESVTEVSDIDAVIEQAEEADQ 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSI +PTPN LINLD SSS S  T  ERR+QQK EEALHASSLRVPRRP WNA MSVEE
Sbjct: 61  LFSIQHPTPNLLINLDTSSSTSGMTPEERREQQKKEEALHASSLRVPRRPSWNAGMSVEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LD NE+Q+FL+WRRSLARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+
Sbjct: 121 LDANEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLL 170

[Close]
BLAST of MELO3C026106 vs. TrEMBL
Match: A0A0D2SVU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G116700 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.6e-69
Identity = 135/170 (79.41%), Postives = 152/170 (89.41%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KN+K G+GRALVK HN MIQQSKEKGRFYKSQ K+VLESVTEVS+IDAVI+QA+EA++
Sbjct: 1   MGKNEKSGVGRALVKHHNAMIQQSKEKGRFYKSQHKKVLESVTEVSNIDAVIEQAEEADQ 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSI +PTPN LINLD SSS+S+ T  ERR+QQK EEALHASSLRVPRRPPW A MSVEE
Sbjct: 61  LFSIHHPTPNPLINLDVSSSISDMTPEERREQQKKEEALHASSLRVPRRPPWTAAMSVEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LD NE+Q+FL+WRRSLARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+
Sbjct: 121 LDANEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLL 170

[Close]
BLAST of MELO3C026106 vs. TrEMBL
Match: A0A067LFS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23906 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.0e-65
Identity = 129/170 (75.88%), Postives = 145/170 (85.29%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KN+K GLGR+LVK HNQMIQQSKEKGRFY +   +VL+S+TEVSDIDAVI+QA+EA+R
Sbjct: 1   MGKNEKTGLGRSLVKHHNQMIQQSKEKGRFYNALHNKVLQSITEVSDIDAVIEQAEEADR 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFS+ +  P  LINLD SSS S+ T  ERR +QK EEALHASSLRVPRRPPWNA MSVEE
Sbjct: 61  LFSLQHAAPTVLINLDTSSSPSDMTPEERRKEQKKEEALHASSLRVPRRPPWNAGMSVEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LD NERQ+FL+WRRSLA LE NE LVLTPFEKNLDIWRQLWRVVER DL+
Sbjct: 121 LDANERQAFLVWRRSLASLEENEKLVLTPFEKNLDIWRQLWRVVERSDLL 170

[Close]
BLAST of MELO3C026106 vs. TAIR10
Match: AT1G08410.1 (AT1G08410.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 231.1 bits (588), Expect = 5.1e-61
Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M K++K  LGR+LVK HN MIQ+SK+KG++YK+ QK+VLESVTEVSDIDA+I+QA+EAER
Sbjct: 1   MGKSEKTSLGRSLVKHHNHMIQESKDKGKYYKNLQKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSIDNPTPNFL-INLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVE 120
           L++I++ +   L INLD +SS S     E R+QQKIEEALHASSL+VPRRPPW   MSVE
Sbjct: 61  LYTINHSSSTPLSINLDTNSSSSVIAAEEWREQQKIEEALHASSLQVPRRPPWTPEMSVE 120

Query: 121 ELDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           ELD NE+Q+FL WRR L  LE NE LVLTPFEKNLDIWRQLWRV+ER DL+
Sbjct: 121 ELDANEKQAFLNWRRMLVSLEENEKLVLTPFEKNLDIWRQLWRVLERSDLI 171

[Close]
BLAST of MELO3C026106 vs. TAIR10
Match: AT2G27200.1 (AT2G27200.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 224.2 bits (570), Expect = 6.3e-59
Identity = 116/172 (67.44%), Postives = 136/172 (79.07%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KN+K  LGRALVK HN MIQ++KEKG+ YK Q K+VLESVTEVSDIDA+I+QA+EAER
Sbjct: 1   MGKNEKTSLGRALVKHHNHMIQETKEKGKSYKDQHKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSI--DNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSV 120
           LF+I  D+ TP   IN+D  SS S  T  E ++Q+  EEALHASSL+VPRRP W  +M+V
Sbjct: 61  LFAIHHDSATP-VPINMDTGSSSSGITAKEWKEQRMREEALHASSLQVPRRPHWTPKMNV 120

Query: 121 EELDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           E+LD NE+Q+FL WRR LA LE NE LVLTPFEKNLDIWRQLWRV+ER DL+
Sbjct: 121 EKLDANEKQAFLTWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLI 171

[Close]
BLAST of MELO3C026106 vs. NCBI nr
Match: gi|659128669|ref|XP_008464315.1| (PREDICTED: large subunit GTPase 1 homolog [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-89
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER
Sbjct: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDL+
Sbjct: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLL 170

[Close]
BLAST of MELO3C026106 vs. NCBI nr
Match: gi|778659692|ref|XP_011654864.1| (PREDICTED: LOW QUALITY PROTEIN: large subunit GTPase 1 homolog [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 7.9e-88
Identity = 165/170 (97.06%), Postives = 168/170 (98.82%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           MR+NDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQK+VLESVTEVSDIDAVIQQADEAER
Sbjct: 1   MRRNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSIDNPTPNFLINLDGSSSVSE TLVERRDQQKIEEALHASSLRVPRRPPWNARMS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDL+
Sbjct: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLL 170

[Close]
BLAST of MELO3C026106 vs. NCBI nr
Match: gi|700209920|gb|KGN65016.1| (hypothetical protein Csa_1G181280 [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 7.9e-88
Identity = 165/170 (97.06%), Postives = 168/170 (98.82%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           MR+NDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQK+VLESVTEVSDIDAVIQQADEAER
Sbjct: 1   MRRNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSIDNPTPNFLINLDGSSSVSE TLVERRDQQKIEEALHASSLRVPRRPPWNARMS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDL+
Sbjct: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLL 170

[Close]
BLAST of MELO3C026106 vs. NCBI nr
Match: gi|449457311|ref|XP_004146392.1| (PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-84
Identity = 160/170 (94.12%), Postives = 164/170 (96.47%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQK+VLESVTEVSDIDAVIQQADEAER
Sbjct: 1   MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSIDNPTPNFLINLDGSSS+SE T  ERR+QQKIEEALHASSLRVPRRPPWNARMS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LDDNERQSFLIWRRSLARLE NENLVLTPFEKNLDIWRQLWRVVERCDL+
Sbjct: 121 LDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLL 170

[Close]
BLAST of MELO3C026106 vs. NCBI nr
Match: gi|659082973|ref|XP_008442123.1| (PREDICTED: large subunit GTPase 1 homolog [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 2.6e-83
Identity = 157/170 (92.35%), Postives = 164/170 (96.47%), Query Frame = 1 

Query: 1   MRKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKRVLESVTEVSDIDAVIQQADEAER 60
           M KNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQK+VLESVTEVSDIDAVIQQADEAER
Sbjct: 1   MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 61  LFSIDNPTPNFLINLDGSSSVSETTLVERRDQQKIEEALHASSLRVPRRPPWNARMSVEE 120
           LFSI+NPTPNFLINLDGSSS+SE T  ERR+QQKIEEALHASSLRVPRRPPWN++MS EE
Sbjct: 61  LFSINNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNSKMSAEE 120

Query: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLV 171
           LDDNERQSFLIWRRSLARLE NENLVLTPFEKNLDIWRQLWRVVERCDL+
Sbjct: 121 LDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLL 170

The following BLAST results are available for this feature:
BLAST of MELO3C026106 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LSG12_ARATH9.1e-6068.42GTPase LSG1-2 OS=Arabidopsis thaliana GN=LSG1-2 PE=1 SV=1[more]
LSG11_ARATH1.1e-5767.44GTPase LSG1-1 OS=Arabidopsis thaliana GN=LSG1-1 PE=1 SV=1[more]
LSG1_DANRE2.3e-2336.02Large subunit GTPase 1 homolog OS=Danio rerio GN=lsg1 PE=2 SV=1[more]
LSG1_YEAST5.2e-2338.12Large subunit GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ... [more]
LSG1_BOVIN4.4e-2236.99Large subunit GTPase 1 homolog OS=Bos taurus GN=LSG1 PE=2 SV=1[more]
BLAST of MELO3C026106 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYK1_CUCSA5.5e-8897.06Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181280 PE=4 SV=1[more]
A0A0A0L3T4_CUCSA9.8e-8594.12Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499330 PE=4 SV=1[more]
A0A061GZM1_THECC1.5e-6980.00P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theo... [more]
A0A0D2SVU1_GOSRA2.6e-6979.41Uncharacterized protein OS=Gossypium raimondii GN=B456_006G116700 PE=4 SV=1[more]
A0A067LFS4_JATCU1.0e-6575.88Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23906 PE=4 SV=1[more]
BLAST of MELO3C026106 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08410.15.1e-6168.42 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT2G27200.16.3e-5967.44 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of MELO3C026106 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128669|ref|XP_008464315.1|1.1e-8999.41PREDICTED: large subunit GTPase 1 homolog [Cucumis melo][more]
gi|778659692|ref|XP_011654864.1|7.9e-8897.06PREDICTED: LOW QUALITY PROTEIN: large subunit GTPase 1 homolog [Cucumis sativus][more]
gi|700209920|gb|KGN65016.1|7.9e-8897.06hypothetical protein Csa_1G181280 [Cucumis sativus][more]
gi|449457311|ref|XP_004146392.1|1.4e-8494.12PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus][more]
gi|659082973|ref|XP_008442123.1|2.6e-8392.35PREDICTED: large subunit GTPase 1 homolog [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005525 GTP binding
molecular_function GO:0016787 hydrolase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47993melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026106T1MELO3C026106T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47993MU47993transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11089GTP-BINDING PROTEIN-RELATEDcoord: 1..170
score: 8.9
NoneNo IPR availablePANTHERPTHR11089:SF7LARGE SUBUNIT GTPASE 1 HOMOLOGcoord: 1..170
score: 8.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C026106Csa1G181280Cucumber (Chinese Long) v2cumeB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026106Cucurbita pepo (Zucchini)cpemeB004
MELO3C026106Bottle gourd (USVL1VR-Ls)lsimeB176
MELO3C026106Cucumber (Gy14) v2cgybmeB016
MELO3C026106Cucumber (Gy14) v2cgybmeB029
MELO3C026106Cucumber (Chinese Long) v3cucmeB016
MELO3C026106Cucumber (Chinese Long) v3cucmeB029
MELO3C026106Watermelon (97103) v2mewmbB138
MELO3C026106Wax gourdmewgoB185
MELO3C026106Cucumber (Gy14) v1cgymeB325
MELO3C026106Cucumber (Gy14) v1cgymeB528
MELO3C026106Cucurbita maxima (Rimu)cmameB195
MELO3C026106Cucurbita maxima (Rimu)cmameB367
MELO3C026106Cucurbita maxima (Rimu)cmameB369
MELO3C026106Cucurbita moschata (Rifu)cmomeB182
MELO3C026106Wild cucumber (PI 183967)cpimeB017
MELO3C026106Wild cucumber (PI 183967)cpimeB031
MELO3C026106Watermelon (Charleston Gray)mewcgB137