MELO3C026091.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026091.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	subtilisin-like protease SBT3.17 isoform X1
Location	chr12 : 14646199 .. 14646576 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGGTCGAATGTCCCTTTTGGGTACGAGGGATTTGCCGCTGGCAATGAAAATGATAAAGATCCTTACTATGTTTAGTCAAGGACTAAACATGTCGCCTGATGAATTTGTGGCCAGTCGACATGAGCGGTTAGGTGACGGTAGAAATGCTTCAAGTAGGTCAAAGAGGAAGAGGAGAAGTCAGCCTGTAGAGACCACGAACATAATTCAAAATGTCATGGAGTACGCCAATAGCCAGCTCAACTACATTGCAAATTGGCCGATCTTAAGGAATCAAAATGCAAGCGCAACACAGGAGGAGGTCGTTCGACAATTACAGGCCATCCTTAAACTTAGTAGAATTGAGGTGTTGCTGTATGCGTATCTTTATGCATAA

mRNA sequence

ATGTGGGGTCGAATGTCCCTTTTGGGTACGAGGGATTTGCCGCTGGCAATGAAAATGATAAAGATCCTTACTATGTTTAGTCAAGGACTAAACATGTCGCCTGATGAATTTGTGGCCAGTCGACATGAGCGGTTAGGTGACGGTAGAAATGCTTCAAGTAGGTCAAAGAGGAAGAGGAGAAGTCAGCCTGTAGAGACCACGAACATAATTCAAAATGTCATGGAGTACGCCAATAGCCAGCTCAACTACATTGCAAATTGGCCGATCTTAAGGAATCAAAATGCAAGCGCAACACAGGAGGAGGTCGTTCGACAATTACAGGCCATCCTTAAACTTAGTAGAATTGAGGTGTTGCTGTATGCGTATCTTTATGCATAA

Coding sequence (CDS)

ATGTGGGGTCGAATGTCCCTTTTGGGTACGAGGGATTTGCCGCTGGCAATGAAAATGATAAAGATCCTTACTATGTTTAGTCAAGGACTAAACATGTCGCCTGATGAATTTGTGGCCAGTCGACATGAGCGGTTAGGTGACGGTAGAAATGCTTCAAGTAGGTCAAAGAGGAAGAGGAGAAGTCAGCCTGTAGAGACCACGAACATAATTCAAAATGTCATGGAGTACGCCAATAGCCAGCTCAACTACATTGCAAATTGGCCGATCTTAAGGAATCAAAATGCAAGCGCAACACAGGAGGAGGTCGTTCGACAATTACAGGCCATCCTTAAACTTAGTAGAATTGAGGTGTTGCTGTATGCGTATCTTTATGCATAA

Protein sequence

MWGRMSLLGTRDLPLAMKMIKILTMFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYIANWPILRNQNASATQEEVVRQLQAILKLSRIEVLLYAYLYA

Homology

[Close]

BLAST of MELO3C026091.2 vs. NCBI nr
Match: ADN33917.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 116.3 bits (290), Expect = 7.4e-23
Identity = 62/86 (72.09%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 28  QGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYIANW 87
           +GLNMSPDEF+ SR  R GDGRNASSRSKRKR  + +E  NIIQN MEYAN QLN I +W
Sbjct: 112 KGLNMSPDEFMDSRLGRSGDGRNASSRSKRKRCGRLIEIANIIQNAMEYANDQLNRIVDW 171

Query: 88  PILRNQNASATQEEVVRQLQAILKLS 114
           PILRNQ+AS TQ+EVVRQLQAI +L+
Sbjct: 172 PILRNQDASVTQQEVVRQLQAIHELN 197

[Close]

BLAST of MELO3C026091.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 84.7 bits (208), Expect = 2.4e-13
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 25  MFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYI 84
           M+S GLNMSPD+ + +R  R+ + RN SS SKRKR     ++ +I++  +EY N QL+ I
Sbjct: 528 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRI 587

Query: 85  ANWPILRNQNASATQEEVVRQLQAILKLSRIE 117
           A WPIL+ Q+A+ T++E+VR L+AI +L+ ++
Sbjct: 588 AEWPILQRQDATQTRQEIVRHLEAIPELTLMD 619

[Close]

BLAST of MELO3C026091.2 vs. NCBI nr
Match: XP_004148199.2 (PREDICTED: RING-H2 finger protein ATL66 [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 20  IKILTMFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANS 79
           ++I TM+ QGLNMSP++ + +R  R  + R  SSRSKRKRR Q VET  +  + MEYAN 
Sbjct: 201 MEIPTMYCQGLNMSPEDIMDTRPSRSSECRTGSSRSKRKRRGQDVETMEVTCSAMEYAND 260

Query: 80  QLNYIANWPILRNQNASATQEEVVR 105
           QL  IA    L  Q+ SAT+ +VVR
Sbjct: 261 QLKAIAECQNLARQDESATRSKVVR 285

[Close]

BLAST of MELO3C026091.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 73.9 bits (180), Expect = 4.2e-10
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 22  ILTMFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQL 81
           I TM+SQG++MSPDE    R  +  + RN SS SKRKR S+  ET  +I++VME+ N QL
Sbjct: 174 IPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQL 233

Query: 82  NYIANWPILRNQNASATQEEVVRQLQAILKL 113
             IA+WP  +       + +VV+QLQ I KL
Sbjct: 234 KAIADWPKEKRAMEVEMRAQVVKQLQDIPKL 264

[Close]

BLAST of MELO3C026091.2 vs. NCBI nr
Match: KGN46631.1 (hypothetical protein Csa_6G116150 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-07
Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 25  MFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYI 84
           M+SQGL+M PDE + +R     +GRN SS SKRK   Q  E  ++I N ME  N QL  I
Sbjct: 1   MYSQGLDMPPDEMLGTRQS--SEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 85  ANWPILRNQNASATQEEVVRQLQAILKL 113
           ANW   +         EVV+QLQ I +L
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISEL 86

[Close]

BLAST of MELO3C026091.2 vs. TrEMBL
Match: tr|E5GBS5|E5GBS5_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-23
Identity = 62/86 (72.09%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 28  QGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYIANW 87
           +GLNMSPDEF+ SR  R GDGRNASSRSKRKR  + +E  NIIQN MEYAN QLN I +W
Sbjct: 112 KGLNMSPDEFMDSRLGRSGDGRNASSRSKRKRCGRLIEIANIIQNAMEYANDQLNRIVDW 171

Query: 88  PILRNQNASATQEEVVRQLQAILKLS 114
           PILRNQ+AS TQ+EVVRQLQAI +L+
Sbjct: 172 PILRNQDASVTQQEVVRQLQAIHELN 197

[Close]

BLAST of MELO3C026091.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 25  MFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYI 84
           M+S GLNMSPD+ + +R  R+ + RN SS SKRKR     ++ +I++  +EY N QL+ I
Sbjct: 528 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRI 587

Query: 85  ANWPILRNQNASATQEEVVRQLQAILKLSRIE 117
           A WPIL+ Q+A+ T++E+VR L+AI +L+ ++
Sbjct: 588 AEWPILQRQDATQTRQEIVRHLEAIPELTLMD 619

[Close]

BLAST of MELO3C026091.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-10
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 22  ILTMFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQL 81
           I TM+SQG++MSPDE    R  +  + RN SS SKRKR S+  ET  +I++VME+ N QL
Sbjct: 174 IPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQL 233

Query: 82  NYIANWPILRNQNASATQEEVVRQLQAILKL 113
             IA+WP  +       + +VV+QLQ I KL
Sbjct: 234 KAIADWPKEKRAMEVEMRAQVVKQLQDIPKL 264

[Close]

BLAST of MELO3C026091.2 vs. TrEMBL
Match: tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 25  MFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYI 84
           M+SQGL+M PDE + +R     +GRN SS SKRK   Q  E  ++I N ME  N QL  I
Sbjct: 1   MYSQGLDMPPDEMLGTRQS--SEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 85  ANWPILRNQNASATQEEVVRQLQAILKL 113
           ANW   +         EVV+QLQ I +L
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISEL 86

[Close]

BLAST of MELO3C026091.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07
Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 25  MFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYI 84
           M+S  LNMSPD+ + +R  R+ + RN SS S+RK      ++ +I+   + Y N QL+ I
Sbjct: 164 MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 223

Query: 85  ANWPILRNQNASATQEEV 103
           A WPIL+ Q+A+ T +E+
Sbjct: 224 AEWPILQRQDATQTCQEI 241

The following BLAST results are available for this feature:

BLAST of MELO3C026091.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33917.1	7.4e-23	72.09	hypothetical protein [Cucumis melo subsp. melo]	[more]
ADN34114.1	2.4e-13	45.65	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_004148199.2	1.4e-10	50.59	PREDICTED: RING-H2 finger protein ATL66 [Cucumis sativus]	[more]
XP_008441954.1	4.2e-10	47.25	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
KGN46631.1	2.0e-07	45.45	hypothetical protein Csa_6G116150 [Cucumis sativus]	[more]

BLAST of MELO3C026091.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C026091.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C026091.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBS5\|E5GBS5_CUCME	4.9e-23	72.09	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|E5GCB5\|E5GCB5_CUCME	1.6e-13	45.65	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	2.8e-10	47.25	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|A0A0A0KFW0\|A0A0A0KFW0_CUCSA	1.3e-07	45.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	2.9e-07	41.03	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008233	peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026091.2.1	MELO3C026091.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..63

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026091.2	Cucumber (Gy14) v2	cgybmedB022
MELO3C026091.2	Cucumber (Gy14) v1	cgymedB527
MELO3C026091.2	Cucurbita maxima (Rimu)	cmamedB223
MELO3C026091.2	Cucurbita maxima (Rimu)	cmamedB414
MELO3C026091.2	Cucurbita maxima (Rimu)	cmamedB426
MELO3C026091.2	Cucurbita pepo (Zucchini)	cpemedB556
MELO3C026091.2	Wild cucumber (PI 183967)	cpimedB025
MELO3C026091.2	Cucumber (Chinese Long) v2	cumedB024
MELO3C026091.2	Bottle gourd (USVL1VR-Ls)	lsimedB184
MELO3C026091.2	Bottle gourd (USVL1VR-Ls)	lsimedB193
MELO3C026091.2	Watermelon (Charleston Gray)	medwcgB126
MELO3C026091.2	Watermelon (Charleston Gray)	medwcgB135
MELO3C026091.2	Watermelon (97103) v1	medwmB156
MELO3C026091.2	Watermelon (97103) v1	medwmB168
MELO3C026091.2	Silver-seed gourd	carmedB0049
MELO3C026091.2	Cucumber (Chinese Long) v3	cucmedB025
MELO3C026091.2	Watermelon (97103) v2	medwmbB126
MELO3C026091.2	Watermelon (97103) v2	medwmbB134
MELO3C026091.2	Wax gourd	medwgoB182