MELO3C026076 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026076
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description50S ribosomal protein L18
Locationchr12 : 14892540 .. 14892692 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCGAGGTAGACCTCGAAAGCACCATGTTGCAGAAGCTAGTAACGCTACTACAGGAGCAACTATGAGGAGTGAGAAGTCTGATGCCGAATCTAGTCGTCCCCATGTTAAGGAGAATGAGGAAGAGCAATTGCTTGATAGACTAGCTTAA

mRNA sequence

ATGCCTCGAGGTAGACCTCGAAAGCACCATGTTGCAGAAGCTAGTAACGCTACTACAGGAGCAACTATGAGGAGTGAGAAGTCTGATGCCGAATCTAGTCGTCCCCATGTTAAGGAGAATGAGGAAGAGCAATTGCTTGATAGACTAGCTTAA

Coding sequence (CDS)

ATGCCTCGAGGTAGACCTCGAAAGCACCATGTTGCAGAAGCTAGTAACGCTACTACAGGAGCAACTATGAGGAGTGAGAAGTCTGATGCCGAATCTAGTCGTCCCCATGTTAAGGAGAATGAGGAAGAGCAATTGCTTGATAGACTAGCTTAA

Protein sequence

MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA*
Homology
[Close]
BLAST of MELO3C026076 vs. NCBI nr
Match: gi|659068829|ref|XP_008446512.1| (PREDICTED: uncharacterized protein LOC103489219 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 6.8e-11
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 1 

Query: 1  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA 51
          MPRGRPRK  VAEASNA   A M SE+ DAESSRPHV+ N EEQLLDRLA
Sbjct: 1  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLA 50

[Close]
BLAST of MELO3C026076 vs. NCBI nr
Match: gi|659072264|ref|XP_008464580.1| (PREDICTED: uncharacterized protein LOC103502419 [Cucumis melo])

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-09
Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 1 

Query: 1  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA 51
          MPRGRPRKH  A+ SNA   A M S +SDAESSRPHV+ N EEQLLDRLA
Sbjct: 20 MPRGRPRKHPDAKTSNAAREAAMGSGESDAESSRPHVEGNMEEQLLDRLA 69

The following BLAST results are available for this feature:
BLAST of MELO3C026076 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068829|ref|XP_008446512.1|6.8e-1176.00PREDICTED: uncharacterized protein LOC103489219 [Cucumis melo][more]
gi|659072264|ref|XP_008464580.1|1.3e-0972.00PREDICTED: uncharacterized protein LOC103502419 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026076T1MELO3C026076T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026076Watermelon (97103) v2mewmbB139
MELO3C026076Watermelon (97103) v2mewmbB145
MELO3C026076Wax gourdmewgoB172
MELO3C026076Cucumber (Gy14) v1cgymeB018
MELO3C026076Cucumber (Gy14) v1cgymeB527
MELO3C026076Cucumber (Gy14) v1cgymeB528
MELO3C026076Cucurbita maxima (Rimu)cmameB203
MELO3C026076Cucurbita maxima (Rimu)cmameB361
MELO3C026076Cucurbita maxima (Rimu)cmameB367
MELO3C026076Cucurbita maxima (Rimu)cmameB369
MELO3C026076Cucurbita moschata (Rifu)cmomeB189
MELO3C026076Cucurbita moschata (Rifu)cmomeB358
MELO3C026076Wild cucumber (PI 183967)cpimeB017
MELO3C026076Wild cucumber (PI 183967)cpimeB451
MELO3C026076Cucumber (Chinese Long) v2cumeB004
MELO3C026076Watermelon (Charleston Gray)mewcgB136
MELO3C026076Watermelon (Charleston Gray)mewcgB143
MELO3C026076Watermelon (97103) v1mewmB160
MELO3C026076Watermelon (97103) v1mewmB164
MELO3C026076Watermelon (97103) v1mewmB165
MELO3C026076Cucurbita pepo (Zucchini)cpemeB032
MELO3C026076Cucurbita pepo (Zucchini)cpemeB474
MELO3C026076Bottle gourd (USVL1VR-Ls)lsimeB129
MELO3C026076Bottle gourd (USVL1VR-Ls)lsimeB176
MELO3C026076Bottle gourd (USVL1VR-Ls)lsimeB184
MELO3C026076Cucumber (Gy14) v2cgybmeB016
MELO3C026076Cucumber (Gy14) v2cgybmeB396
MELO3C026076Silver-seed gourdcarmeB0047
MELO3C026076Silver-seed gourdcarmeB0050
MELO3C026076Cucumber (Chinese Long) v3cucmeB016
MELO3C026076Cucumber (Chinese Long) v3cucmeB029