MELO3C026069 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026069
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	5-aminolevulinate synthase
Location	chr12 : 14949830 .. 14950291 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAATGATGGTGTTCCCCTCGGTGATTCACATCATGAAGACATCCCAACGATGTATAGCCAAGGAGTGCTTATGTCACTAGATGAGATGTTTGGAACACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTAGAAGTAAGAGAAAACAAGGTAGCCAACATTATGAAACGGTAGAGGTGATCAGGAGTGCAATGAAATTTGGAAATGATCAATTAAAGGCAATTGCAGATTGGCTAAAAGAGAAACGTGCAATGAAGGTCGAATTACGTGCTCTAGTCGTGAAACAGCTGCAAGATATCCCTAAACTACAAAACCGAGATAGGCCAAAGATTATACAAATCCTATTTCATAGTGTGGAGGGCATTGAGGGATTCCTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATGTTCTCTTAGAAAAGTTTGACCAATTAACAATTTTATGA

mRNA sequence

ATGTTTAATGATGGTGTTCCCCTCGGTGATTCACATCATGAAGACATCCCAACGATGTATAGCCAAGGAGTGCTTATGTCACTAGATGAGATGTTTGGAACACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTAGAAGTAAGAGAAAACAAGGTAGCCAACATTATGAAACGGTAGAGGTGATCAGGAGTGCAATGAAATTTGGAAATGATCAATTAAAGGCAATTGCAGATTGGCTAAAAGAGAAACGTGCAATGAAGGTCGAATTACGTGCTCTAGTCGTGAAACAGCTGCAAGATATCCCTAAACTACAAAACCGAGATAGGCCAAAGATTATACAAATCCTATTTCATAGTGTGGAGGGCATTGAGGGATTCCTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATGTTCTCTTAGAAAAGTTTGACCAATTAACAATTTTATGA

Coding sequence (CDS)

ATGTTTAATGATGGTGTTCCCCTCGGTGATTCACATCATGAAGACATCCCAACGATGTATAGCCAAGGAGTGCTTATGTCACTAGATGAGATGTTTGGAACACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTAGAAGTAAGAGAAAACAAGGTAGCCAACATTATGAAACGGTAGAGGTGATCAGGAGTGCAATGAAATTTGGAAATGATCAATTAAAGGCAATTGCAGATTGGCTAAAAGAGAAACGTGCAATGAAGGTCGAATTACGTGCTCTAGTCGTGAAACAGCTGCAAGATATCCCTAAACTACAAAACCGAGATAGGCCAAAGATTATACAAATCCTATTTCATAGTGTGGAGGGCATTGAGGGATTCCTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATGTTCTCTTAGAAAAGTTTGACCAATTAACAATTTTATGA

Protein sequence

MFNDGVPLGDSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETVEVIRSAMKFGNDQLKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFHSVEGIEGFLSIPTELKLEYCNVLLEKFDQLTIL*

Homology

[Close]

BLAST of MELO3C026069 vs. TrEMBL
Match: E5GBB1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-47
Identity = 97/128 (75.78%), Postives = 110/128 (85.94%), Query Frame = 1


Query: 1   MFNDGVPLGDSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYET 60
           MFNDGVPLGDSH +DIPTMYSQGV M  +EMFG RA QASERRNCSS SKRKQGS+HYE 
Sbjct: 1   MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEM 60

Query: 61  VEVIRSAMKFGNDQLKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFH 120
           VEVI+SAM+FGNDQLKA  DW K+K + +VEL A VVKQLQDIP+L++RDR K++QILF 
Sbjct: 61  VEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFR 120

Query: 121 SVEGIEGF 129
           SVE IEGF
Sbjct: 121 SVEAIEGF 128

[Close]

BLAST of MELO3C026069 vs. TrEMBL
Match: A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.0e-38
Identity = 86/127 (67.72%), Postives = 100/127 (78.74%), Query Frame = 1


Query: 19  MYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETVEVIRSAMKFGNDQLKAI 78
           MYSQG+ M  DEM GTR  Q+SE RNCSS SKRK G QHYE V+VI + M+  NDQLKAI
Sbjct: 1   MYSQGLDMPPDEMLGTR--QSSEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 79  ADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFHSVEGIEGFLSIPTELKLE 138
           A+W KEKRA +VEL   VVKQLQDI +L+ RDR K++QI+FH V+ IEGFLS PT+LKLE
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLE 120

Query: 139 YCNVLLE 146
           YC VLLE
Sbjct: 121 YCRVLLE 125

[Close]

BLAST of MELO3C026069 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.4e-20
Identity = 50/132 (37.88%), Postives = 87/132 (65.91%), Query Frame = 1


Query: 15  DIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETVEVIRSAMKFGNDQ 74
           D P MYS G+ MS D++  TR  + SERRN SS SKRK+     ++ +++R+A+++GN+Q
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 75  LKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFHSVEGIEGFLSIPTE 134
           L  IA+W   +R    + R  +V+ L+ IP+L   DR ++++IL  +V+ ++ FL +P  
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDH 643

Query: 135 LKLEYCNVLLEK 147
           +K  YC+++L++
Sbjct: 644 MKYPYCSLILQE 655

[Close]

BLAST of MELO3C026069 vs. TrEMBL
Match: A0A0A0M036_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G654880 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.2e-18
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = 1


Query: 2   FNDGVPLGDSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETV 61
           FNDGVP GDSH  +I  MYSQG+ MS DEM GT  GQ SE RN S+ +KRKQG Q+YE +
Sbjct: 47  FNDGVPFGDSHDPNILMMYSQGMDMSSDEMLGTCVGQTSEGRNTSNGNKRKQGGQYYEMM 106

Query: 62  EVIRSAMKFGNDQLK 77
           EV+R+AM+F ND LK
Sbjct: 107 EVLRNAMEFANDPLK 121

[Close]

BLAST of MELO3C026069 vs. TrEMBL
Match: A0A0A0LEB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G643760 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-14
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 1


Query: 44  NCSSRSKRKQGSQHYETVEVIRSAMKFGNDQLKAIADWLKEKRAMKVELRALVVKQLQDI 103
           N SSRSKRK+G Q  ET+++IR+ MK+ NDQ +AI +W   +   K    A V+KQLQ I
Sbjct: 2   NASSRSKRKRGGQTAETMKIIRNTMKYVNDQSEAIVEWPSVQHQSKDAFYAEVMKQLQAI 61

Query: 104 PKLQNRDRPKIIQILFHSVEGIEGFLSIPTELKLEYCNVLLE 146
           P+L   DR  ++  L  +V  ++    I  ELKL+YC V+LE
Sbjct: 62  PELSTHDRRCLMWTLMCNVHDMKALWEISNELKLDYCTVMLE 103

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 1.8e-59
Identity = 117/145 (80.69%), Postives = 132/145 (91.03%), Query Frame = 1


Query: 1   MFNDGVPLGDSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYET 60
           MFND +PLGDSH EDIPTMYSQGV MS DEMFG RAGQASERRNCSS SKRK+GS+ YET
Sbjct: 159 MFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYET 218

Query: 61  VEVIRSAMKFGNDQLKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFH 120
           VEVIRS M+FGN+QLKAIADW KEKRAM+VE+RA VVKQLQDIPKL+++DR K++QILF 
Sbjct: 219 VEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFR 278

Query: 121 SVEGIEGFLSIPTELKLEYCNVLLE 146
           S+E IEGFLSIPTELKLEYCN+LL+
Sbjct: 279 SLEAIEGFLSIPTELKLEYCNILLQ 303

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-55
Identity = 112/145 (77.24%), Postives = 128/145 (88.28%), Query Frame = 1


Query: 1   MFNDGVPLGDSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYET 60
           MFNDGVPLGDSH++DI T+YSQGV MSLDE+FG RAGQASERRN SS SKRK+GS+HYE 
Sbjct: 116 MFNDGVPLGDSHNQDILTIYSQGVHMSLDEIFGIRAGQASERRNYSSGSKRKRGSKHYEM 175

Query: 61  VEVIRSAMKFGNDQLKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFH 120
           VEVI SA +FGNDQLK I DW KEKRA +VELR  VVKQLQDIP+L+++DR K++QILF 
Sbjct: 176 VEVISSATEFGNDQLKTITDWPKEKRATEVELRTEVVKQLQDIPQLRSQDRAKLMQILFR 235

Query: 121 SVEGIEGFLSIPTELKLEYCNVLLE 146
           SVE IEGFLSIPT+LKLEYCN+LLE
Sbjct: 236 SVEAIEGFLSIPTKLKLEYCNILLE 260

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: gi|307135888|gb|ADN33753.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-47
Identity = 97/128 (75.78%), Postives = 110/128 (85.94%), Query Frame = 1


Query: 1   MFNDGVPLGDSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYET 60
           MFNDGVPLGDSH +DIPTMYSQGV M  +EMFG RA QASERRNCSS SKRKQGS+HYE 
Sbjct: 1   MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEM 60

Query: 61  VEVIRSAMKFGNDQLKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFH 120
           VEVI+SAM+FGNDQLKA  DW K+K + +VEL A VVKQLQDIP+L++RDR K++QILF 
Sbjct: 61  VEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFR 120

Query: 121 SVEGIEGF 129
           SVE IEGF
Sbjct: 121 SVEAIEGF 128

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: gi|700191427|gb|KGN46631.1| (hypothetical protein Csa_6G116150 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-37
Identity = 86/127 (67.72%), Postives = 100/127 (78.74%), Query Frame = 1


Query: 19  MYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETVEVIRSAMKFGNDQLKAI 78
           MYSQG+ M  DEM GTR  Q+SE RNCSS SKRK G QHYE V+VI + M+  NDQLKAI
Sbjct: 1   MYSQGLDMPPDEMLGTR--QSSEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 79  ADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFHSVEGIEGFLSIPTELKLE 138
           A+W KEKRA +VEL   VVKQLQDI +L+ RDR K++QI+FH V+ IEGFLS PT+LKLE
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLE 120

Query: 139 YCNVLLE 146
           YC VLLE
Sbjct: 121 YCRVLLE 125

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: gi|659133698|ref|XP_008466863.1| (PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-20
Identity = 50/132 (37.88%), Postives = 86/132 (65.15%), Query Frame = 1


Query: 15  DIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETVEVIRSAMKFGNDQ 74
           D   MYS G+ MS D++  TR  + SERRN SS SKRK+     ++ +++R A+++GN+Q
Sbjct: 376 DFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRIAIEYGNEQ 435

Query: 75  LKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFHSVEGIEGFLSIPTE 134
           L  IA+W   +R    + R  +V+QL+ IP+L   DR +++ I+ H+++ ++ FL +P  
Sbjct: 436 LHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMHIIMHNIDDMKAFLEVPDN 495

Query: 135 LKLEYCNVLLEK 147
           +K  YCN++L++
Sbjct: 496 MKYSYCNIILQE 507

The following BLAST results are available for this feature:

BLAST of MELO3C026069 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBB1_CUCME	3.2e-47	75.78	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KFW0_CUCSA	8.0e-38	67.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1	[more]
E5GCB5_CUCME	3.4e-20	37.88	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0M036_CUCSA	9.2e-18	64.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G654880 PE=4 SV=1	[more]
A0A0A0LEB9_CUCSA	1.6e-14	45.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G643760 PE=4 SV=1	[more]

BLAST of MELO3C026069 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082641\|ref\|XP_008441954.1\|	1.8e-59	80.69	PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]	[more]
gi\|659113923\|ref\|XP_008456820.1\|	2.1e-55	77.24	PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo]	[more]
gi\|307135888\|gb\|ADN33753.1\|	4.7e-47	75.78	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|700191427\|gb\|KGN46631.1\|	1.1e-37	67.72	hypothetical protein Csa_6G116150 [Cucumis sativus]	[more]
gi\|659133698\|ref\|XP_008466863.1\|	1.7e-20	37.88	PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026069T1	MELO3C026069T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026069	Cucurbita maxima (Rimu)	cmameB203
MELO3C026069	Cucurbita maxima (Rimu)	cmameB361
MELO3C026069	Cucurbita maxima (Rimu)	cmameB369
MELO3C026069	Cucurbita moschata (Rifu)	cmomeB189
MELO3C026069	Cucurbita moschata (Rifu)	cmomeB358
MELO3C026069	Wild cucumber (PI 183967)	cpimeB017
MELO3C026069	Wild cucumber (PI 183967)	cpimeB451
MELO3C026069	Cucumber (Chinese Long) v2	cumeB004
MELO3C026069	Watermelon (Charleston Gray)	mewcgB136
MELO3C026069	Watermelon (Charleston Gray)	mewcgB143
MELO3C026069	Watermelon (97103) v1	mewmB160
MELO3C026069	Watermelon (97103) v1	mewmB164
MELO3C026069	Watermelon (97103) v1	mewmB165
MELO3C026069	Cucurbita pepo (Zucchini)	cpemeB032
MELO3C026069	Cucurbita pepo (Zucchini)	cpemeB474
MELO3C026069	Bottle gourd (USVL1VR-Ls)	lsimeB129
MELO3C026069	Bottle gourd (USVL1VR-Ls)	lsimeB176
MELO3C026069	Cucumber (Gy14) v2	cgybmeB016
MELO3C026069	Cucumber (Gy14) v2	cgybmeB396
MELO3C026069	Silver-seed gourd	carmeB0047
MELO3C026069	Silver-seed gourd	carmeB0050
MELO3C026069	Cucumber (Chinese Long) v3	cucmeB016
MELO3C026069	Cucumber (Chinese Long) v3	cucmeB029
MELO3C026069	Watermelon (97103) v2	mewmbB139
MELO3C026069	Watermelon (97103) v2	mewmbB145
MELO3C026069	Wax gourd	mewgoB172
MELO3C026069	Cucumber (Gy14) v1	cgymeB018
MELO3C026069	Cucumber (Gy14) v1	cgymeB527
MELO3C026069	Cucumber (Gy14) v1	cgymeB528