MELO3C026064 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C026064
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative reverse transcriptase
Locationchr12 : 15098190 .. 15099239 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAATGAATATGCACGTACATCTCCTACCATACTTTTAGGAAGACAATTCTTGAAAACTGCTAATGCTATAGTTAATATTGATAAAGGTCTTCTTAGTGTAGAGTTTGATGGCAATGTAGTGTCTTGCAGCATTTTTGATGATGTAAAATCCTCTAATGTTCATGTTTCATTGTGTGCACTTGATACTTTAGAATCATTAAAGAAACTAGAAGAGCATGATAAATTCAATGAGCTTATTGATCAAGCAACTTTAGAACATGTTGAAAATGAATTTGCTAAGAACAAACCTAGTGATGATGATCTCTCTATCTTCCTTGACTTTGTTACTAGTGTAAATGATGAGTATGTCTTGGTTGATAATATTGCAACAAATGAACATGTTCCAGAAAATGATTTTGTATCTAGTAATGAGCATGATCAAGGAAGAAACATTAAGGATGATAGTGAACACATTTTGAAAAGCATTGTCATTGAAAATGATCATGACACAAGCATCCACATAAAAAATTTTGAAAAGGAGAATGATTTAGAGAAAGATTATTGTGAAGTTTCTTTACATAAAGAATGTGAGAGTTCCAATACTAATGAACTTACTCGACCTTTGCAGGAAAATGGGATAAAACTAAAGGTTCTCCCTTCTCACCTCAAATATGTGTTCTTGGGGGAAAAGAACACATATCATGTCATTATTTCGAAGGAGCTTACCAAGGAACAAGAAGCAAGGTTGCTTGAAACCTTGAAAATACATAGGCAAGCCATTGGTTAGAGTCTTAAAGACTTGAAGGGGATCAATCCATCCTTTTGCACAAACTGAATCCATCTTGAGGAAGGGGCAAAGAACAAGATTCAACCACAAAGGCGCGTCAATCCTAACTTGAAGGAATTTGTCAAGAAAGAGGTCTTCAAGCTCAAAGACGTCGGGATCATCTATCCAGTACCACATAGCACTTGGGTAAGCCTTATTTATGTGGTACCCAAGAAGACCGGTATGACCATTGTGGAAAATAGCCAAGGTAAGTTCGTTCATACTCGTGTGTCAAAATAG

mRNA sequence

ATGAACAATGAATATGCACGTACATCTCCTACCATACTTTTAGGAAGACAATTCTTGAAAACTGCTAATGCTATAGTTAATATTGATAAAGGTCTTCTTAGTGTAGAGTTTGATGGCAATGTAGTGTCTTGCAGCATTTTTGATGATGTAAAATCCTCTAATGTTCATGTTTCATTGTGTGCACTTGATACTTTAGAATCATTAAAGAAACTAGAAGAGCATGATAAATTCAATGAGCTTATTGATCAAGCAACTTTAGAACATGTTGAAAATGAATTTGCTAAGAACAAACCTAGTGATGATGATCTCTCTATCTTCCTTGACTTTGTTACTAGTGTAAATGATGAGTATGTCTTGGTTGATAATATTGCAACAAATGAACATGTTCCAGAAAATGATTTTGTATCTAGTAATGAGCATGATCAAGGAAGAAACATTAAGGATGATAGTGAACACATTTTGAAAAGCATTGTCATTGAAAATGATCATGACACAAGCATCCACATAAAAAATTTTGAAAAGGAGAATGATTTAGAGAAAGATTATTGTGAAGTTTCTTTACATAAAGAATGTGAGAGTTCCAATACTAATGAACTTACTCGACCTTTGCAGGAAAATGGGATAAAACTAAAGGTTCTCCCTTCTCACCTCAAATATGTGTTCTTGGGGGAAAAGAACACATATCATGTCATTATTTCGAAGGAGCTTACCAAGGAACAAGAAGCAAGGTTGCTTGAAACCTTGAAAATACATAGGCAAGCCATTGGGGCAAAGAACAAGATTCAACCACAAAGGCGCGTCAATCCTAACTTGAAGGAATTTGTCAAGAAAGAGGTCTTCAAGCTCAAAGACGTCGGGATCATCTATCCAGTACCACATAGCACTTGGGTAAGCCTTATTTATGTGGTACCCAAGAAGACCGGTATGACCATTGTGGAAAATAGCCAAGGTAAGTTCGTTCATACTCGTGTGTCAAAATAG

Coding sequence (CDS)

ATGAACAATGAATATGCACGTACATCTCCTACCATACTTTTAGGAAGACAATTCTTGAAAACTGCTAATGCTATAGTTAATATTGATAAAGGTCTTCTTAGTGTAGAGTTTGATGGCAATGTAGTGTCTTGCAGCATTTTTGATGATGTAAAATCCTCTAATGTTCATGTTTCATTGTGTGCACTTGATACTTTAGAATCATTAAAGAAACTAGAAGAGCATGATAAATTCAATGAGCTTATTGATCAAGCAACTTTAGAACATGTTGAAAATGAATTTGCTAAGAACAAACCTAGTGATGATGATCTCTCTATCTTCCTTGACTTTGTTACTAGTGTAAATGATGAGTATGTCTTGGTTGATAATATTGCAACAAATGAACATGTTCCAGAAAATGATTTTGTATCTAGTAATGAGCATGATCAAGGAAGAAACATTAAGGATGATAGTGAACACATTTTGAAAAGCATTGTCATTGAAAATGATCATGACACAAGCATCCACATAAAAAATTTTGAAAAGGAGAATGATTTAGAGAAAGATTATTGTGAAGTTTCTTTACATAAAGAATGTGAGAGTTCCAATACTAATGAACTTACTCGACCTTTGCAGGAAAATGGGATAAAACTAAAGGTTCTCCCTTCTCACCTCAAATATGTGTTCTTGGGGGAAAAGAACACATATCATGTCATTATTTCGAAGGAGCTTACCAAGGAACAAGAAGCAAGGTTGCTTGAAACCTTGAAAATACATAGGCAAGCCATTGGGGCAAAGAACAAGATTCAACCACAAAGGCGCGTCAATCCTAACTTGAAGGAATTTGTCAAGAAAGAGGTCTTCAAGCTCAAAGACGTCGGGATCATCTATCCAGTACCACATAGCACTTGGGTAAGCCTTATTTATGTGGTACCCAAGAAGACCGGTATGACCATTGTGGAAAATAGCCAAGGTAAGTTCGTTCATACTCGTGTGTCAAAATAG

Protein sequence

MNNEYARTSPTILLGRQFLKTANAIVNIDKGLLSVEFDGNVVSCSIFDDVKSSNVHVSLCALDTLESLKKLEEHDKFNELIDQATLEHVENEFAKNKPSDDDLSIFLDFVTSVNDEYVLVDNIATNEHVPENDFVSSNEHDQGRNIKDDSEHILKSIVIENDHDTSIHIKNFEKENDLEKDYCEVSLHKECESSNTNELTRPLQENGIKLKVLPSHLKYVFLGEKNTYHVIISKELTKEQEARLLETLKIHRQAIGAKNKIQPQRRVNPNLKEFVKKEVFKLKDVGIIYPVPHSTWVSLIYVVPKKTGMTIVENSQGKFVHTRVSK*
Homology
[Close]
BLAST of MELO3C026064 vs. TrEMBL
Match: A0A0A0KY93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G151750 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-28
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 1 

Query: 58  SLCALDTLESLKKLEEHDKFNELIDQATLEHVENEFAKNKPSDDDLSIFLDFVTSVNDEY 117
           SL  + T+E+     EHDKFNELI+Q TLE+ +N+FAK KPSD+DLSIFLDFVTS+NDE+
Sbjct: 5   SLIVIITIETF----EHDKFNELIEQETLEYFDNKFAKEKPSDNDLSIFLDFVTSINDEH 64

Query: 118 VLVDNIATNE-HVPENDFVSSNEHDQGRNIKDDSEHILKSIVIENDHDTS 167
           VLVDN+AT+E H   N   S  E+D GR+IKDD EHILK+I I+N+ DTS
Sbjct: 65  VLVDNVATHEQHALGNYLASGKEYDLGRDIKDDDEHILKTIGIDNEPDTS 110

[Close]
BLAST of MELO3C026064 vs. TrEMBL
Match: A0A151R5W3_CAJCA (Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan GN=KK1_040876 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.1e-26
Identity = 109/352 (30.97%), Postives = 160/352 (45.45%), Query Frame = 1 

Query: 1   MNNEYARTSPTILLGRQFLKTANAIVNIDKGLLSVEFDGNVVSCSIFDDVKSSNVHVSLC 60
           M   ++  S  I+LGR FLK A   +++  G LS+EF   VV  +I D +K  +      
Sbjct: 106 MEEGFSHGSVPIMLGRPFLKIARKKIDVYAGTLSMEFGDIVVHFNILDAMKFPS------ 165

Query: 61  ALDTLESLKKLEEHDKFN-ELIDQATLEHV---ENEFAKNKPSDDDLSIFLDFVTSVNDE 120
                      E H  F  ELID    EH+   ++  A+      DL  +L  + S +  
Sbjct: 166 -----------EAHSIFRAELIDDIVDEHIHGLDSSHARKHSFSSDLYSYLPCIESES-- 225

Query: 121 YVLVDNIATNEHVPENDFVSSNEHD-QGRNIKDDSEHILKSIVIENDHDTSIHIKNFEKE 180
                         E++++S  E D +    + D+   +   +     + + H+    KE
Sbjct: 226 --------------ESEYLSECETDYEPSEFEFDTLGAVPLALDFIQSECTNHVAGSTKE 285

Query: 181 NDLEKDYCEVSLHKECESSNTNELTRPLQENGIKLKVLPSHLKYVFLGEKNTYHVIISKE 240
           +DL+    EV   +    S      +P     ++LK LP +LKY +L +     VIIS  
Sbjct: 286 SDLQ---VEVQAAEPLLPSLVLSDVQPAPT--LELKPLPDNLKYAYLEDDEKLPVIISTS 345

Query: 241 LTKEQEARLLETLKIHRQAIG-----------------------AKNKIQPQRRVNPNLK 300
           L   QE +LL  L+ H++AIG                        K   QPQRR+NP + 
Sbjct: 346 LDVVQEEKLLHVLRKHKKAIGWTLADIPGISPSTCMHRILLEDEVKPVRQPQRRLNPVIL 405

Query: 301 EFVKKEVFKLKDVGIIYPVPHSTWVSLIYVVPKKTGMTIVENSQGKFVHTRV 325
           E VKKEV KL  VGIIYP+  S WVS I VVPKKT +T+V+N + + + TRV
Sbjct: 406 EVVKKEVTKLLQVGIIYPISDSQWVSPIQVVPKKTSLTVVKNEKHELIPTRV 419

[Close]
BLAST of MELO3C026064 vs. TrEMBL
Match: A0A151QMW0_CAJCA (Transposon Ty3-G Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_047970 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.7e-26
Identity = 108/350 (30.86%), Postives = 162/350 (46.29%), Query Frame = 1 

Query: 1   MNNEYARTSPTILLGRQFLKTANAIVNIDKGLLSVEFDGNVVSCSIFDDVKSSNVHVSLC 60
           M + ++  S  I+LGR FLK A   +++  G LS+EF    V  +I D +K  +      
Sbjct: 66  MEDGFSHGSVPIILGRPFLKIARTKIDVYAGTLSMEFGDIAVHFNILDAMKFPS------ 125

Query: 61  ALDTLESLKKLEEHDKFN-ELIDQATLEHVENEFAKNKPSDDDLSIFL-DFVTSVNDEYV 120
                      E H  F  ELID    EH+ ++F  ++      S+ L +++  +  E+ 
Sbjct: 126 -----------EAHSVFRAELIDDILDEHI-HDFDSSQAKKHSFSLDLYNYLPCIEYEF- 185

Query: 121 LVDNIATNEHVPENDFVSSNEHD-QGRNIKDDSEHILKSIVIENDHDTSIHIKNFEKEND 180
                       E+++ S  E D +    + D+  ++   +     + + H+    KE+D
Sbjct: 186 ------------ESEYQSECETDYEPSEFEFDTLSVVPHALDFIQSECTNHVAGSTKESD 245

Query: 181 LEKDYCEVSLHKECESSNTNELTRPLQENGIKLKVLPSHLKYVFLGEKNTYHVIISKELT 240
           L+    EV   +    S      +P      +LK LP +LKY +L +     VIIS  L 
Sbjct: 246 LQ---VEVQAAEPLLPSLVPSDVQPAPTP--ELKPLPENLKYAYLEDDEKLPVIISTSLD 305

Query: 241 KEQEARLLETLKIHRQAIG-----------------------AKNKIQPQRRVNPNLKEF 300
             QE +LL  LK H++AIG                       AK   QPQRR+NP + E 
Sbjct: 306 VVQEEKLLHVLKKHKKAIGWTLADIPRISPSTCMHRILLEDGAKPVRQPQRRLNPVILEV 365

Query: 301 VKKEVFKLKDVGIIYPVPHSTWVSLIYVVPKKTGMTIVENSQGKFVHTRV 325
           VKKEV KL   GIIYP+  S WVS + V PKKTG+TIV+N + + + TRV
Sbjct: 366 VKKEVTKLLQAGIIYPISDSQWVSPVQVGPKKTGLTIVKNERDELIPTRV 379

[Close]
BLAST of MELO3C026064 vs. TrEMBL
Match: A0A151S3B5_CAJCA (Retrovirus-related Pol polyprotein from transposon 297 family (Fragment) OS=Cajanus cajan GN=KK1_028983 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25
Identity = 77/180 (42.78%), Postives = 104/180 (57.78%), Query Frame = 1 

Query: 171 NFEKENDLEKDYCEVSLHKECESSNTN--ELTRPL--QENGIKLKVLPSHLKYVFLGEKN 230
           N E+E ++E     ++  KE    N    EL   L  +E  ++LKVLPSHLKYVFL E N
Sbjct: 102 NDEEEKEIEACLRNLNSTKEVPERNIKFKELHESLRSEEQKLELKVLPSHLKYVFLEEGN 161

Query: 231 TYHVIISKELTKEQEARLLETLKIHRQAIG-------------AKNKI----------QP 290
              VIIS  L+  +E RL+E L+++R+AIG               +KI          QP
Sbjct: 162 NKPVIISSSLSDNEEKRLIEVLQLNREAIGWTLSDLKGISPSYCMHKIHMEQDYRPVAQP 221

Query: 291 QRRVNPNLKEFVKKEVFKLKDVGIIYPVPHSTWVSLIYVVPKKTGMTIVENSQGKFVHTR 324
           QRR+NP +KE VKKEV KL + G+IYP+  S WVS + VVPKK GMT++ N + + + TR
Sbjct: 222 QRRLNPTMKEVVKKEVQKLLEAGMIYPISDSAWVSPVQVVPKKGGMTVIHNEKNELIPTR 281

[Close]
BLAST of MELO3C026064 vs. TrEMBL
Match: A0A151S3B5_CAJCA (Retrovirus-related Pol polyprotein from transposon 297 family (Fragment) OS=Cajanus cajan GN=KK1_028983 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.7e-16
Identity = 83/318 (26.10%), Postives = 144/318 (45.28%), Query Frame = 1 

Query: 12  ILLGRQFLKTANAIVNIDKGLLSVEFDGNVVSCSIFDDVKSSNVHVSLCALDTLESLKKL 71
           ++LGR F+KTA  I+++D G L V      V+ ++F+ ++  N       +D L+ +   
Sbjct: 20  LILGRPFMKTAKVIIDVDDGKLKVRVQDEEVNFNVFEAMQYPNDKNDCMRVDILDDVIFA 79

Query: 72  EEHDKFNELIDQATLEHVENEFAKNKPSDDDLSIFLDFVTSVNDEYVLVDNIATNEHVPE 131
                 +++  Q++LE    E  +    +++  I              + N+ + + VPE
Sbjct: 80  AS----SQIHSQSSLEKALIEAFEFLNDEEEKEI-----------EACLRNLNSTKEVPE 139

Query: 132 NDFVSSNEHDQGRNIKDDSE-----HILKSIVIENDHDTSIHIKNFEKENDLEKDYCEV- 191
            +      H+  R+ +   E       LK + +E  ++  + I +   +N+ EK   EV 
Sbjct: 140 RNIKFKELHESLRSEEQKLELKVLPSHLKYVFLEEGNNKPVIISSSLSDNE-EKRLIEVL 199

Query: 192 SLHKECESSNTNELTRPLQENGIKLKVLPSHLKYVFLGEKNTYHVIISKELTKEQEARLL 251
            L++E      ++L       GI     PS+  +               ++  EQ+ R +
Sbjct: 200 QLNREAIGWTLSDL------KGIS----PSYCMH---------------KIHMEQDYRPV 259

Query: 252 ETLKIHRQAIGAKNKIQPQRRVNPNLKEFVKKEVFKLKDVGIIYPVPHSTWVSLIYVVPK 311
                           QPQRR+NP +KE VKKEV KL + G+IYP+  S WVS + VVPK
Sbjct: 260 ---------------AQPQRRLNPTMKEVVKKEVQKLLEAGMIYPISDSAWVSPVQVVPK 281

Query: 312 KTGMTIVENSQGKFVHTR 324
           K GMT++ N + + + TR
Sbjct: 320 KGGMTVIHNEKNELIPTR 281


HSP 2 Score: 124.0 bits (310), Expect = 3.3e-25
Identity = 109/352 (30.97%), Postives = 158/352 (44.89%), Query Frame = 1 

Query: 1   MNNEYARTSPTILLGRQFLKTANAIVNIDKGLLSVEFDGNVVSCSIFDDVKSSNVHVSLC 60
           M   ++  S  I+LGR FLK A   +++  G LS+EF   VV  +I D +K  +      
Sbjct: 66  MEEGFSHGSVPIILGRPFLKIARTKIDVYAGTLSMEFGDIVVHFNILDAMKFPS------ 125

Query: 61  ALDTLESLKKLEEHDKFN-ELIDQATLEHV---ENEFAKNKPSDDDLSIFLDFVTSVNDE 120
                      + H  F  ELID    EH+   ++  A       DL  +L  +      
Sbjct: 126 -----------KAHSVFRAELIDDLVDEHIHGLDSSHANKHSFSFDLYSYLPCI------ 185

Query: 121 YVLVDNIATNEHVPENDFVSSNEHD-QGRNIKDDSEHILKSIVIENDHDTSIHIKNFEKE 180
                     E   E+++ S  E D +    + D+  +    +     + + H+    KE
Sbjct: 186 ----------EFESESEYQSECETDYEASEFEFDTLGVAPLALDFIQSECTNHVVGSTKE 245

Query: 181 NDLEKDYCEVSLHKECESSNTNELTRPLQENGIKLKVLPSHLKYVFLGEKNTYHVIISKE 240
           + L+    EV   +    S      +P      +LK LP +LKY +L +   + VIIS  
Sbjct: 246 SYLQ---VEVQATEPLLPSLVPSDVQPAPTP--ELKPLPENLKYAYLEDDERFPVIISTS 305

Query: 241 LTKEQEARLLETLKIHRQAI-----------------------GAKNKIQPQRRVNPNLK 300
           L  +QE RLL  L+ H++AI                       GAK   QPQRR+N  + 
Sbjct: 306 LDVDQEERLLHVLRKHKKAIGWTLAAIPGISLSTCMHRILLEDGAKPMRQPQRRLNLVIL 365

Query: 301 EFVKKEVFKLKDVGIIYPVPHSTWVSLIYVVPKKTGMTIVENSQGKFVHTRV 325
           E VKKEV KL  VGIIYP+  S WVS + VVPKKTG+TIV+N + + + TRV
Sbjct: 366 EVVKKEVTKLLQVGIIYPISDSQWVSPVQVVPKKTGLTIVKNERDELIPTRV 379

[Close]
BLAST of MELO3C026064 vs. NCBI nr
Match: gi|659072254|ref|XP_008464440.1| (PREDICTED: uncharacterized protein LOC103502324 [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 121/168 (72.02%), Postives = 138/168 (82.14%), Query Frame = 1 

Query: 1   MNNEYARTSPTILLGRQFLKTANAIVNIDKGLLSVEFDGNVVSCSIFDDVKSSNVHVSLC 60
           MN+E++RTSPTILLG+ FLK A A +N+DKGLLSVEFDG++ S + FDDV SSN HVSLC
Sbjct: 263 MNHEFSRTSPTILLGKSFLKIAKAKINVDKGLLSVEFDGDIESFNSFDDVNSSNDHVSLC 322

Query: 61  ALDTLESLKKLEEHDKFNELIDQATLEHVENEFAKNKPSDDDLSIFLDFVTSVNDEYVLV 120
           ALDTLESLK  EEHDKFNELIDQ TLE+VENEFAKNK SDDD SIFLDF  SVNDE+ LV
Sbjct: 323 ALDTLESLKTQEEHDKFNELIDQTTLEYVENEFAKNKLSDDDFSIFLDFFASVNDEHALV 382

Query: 121 DNIATN-EHVPENDFVSSNEHDQGRNIKDDSEHILKSIVIENDHDTSI 168
           DN+ATN  H  +NDF SSNEH  GRNI +D+EH LK I IEND  T++
Sbjct: 383 DNLATNGHHALDNDFASSNEHHLGRNINNDNEHTLKVIDIENDLGTNL 430

[Close]
BLAST of MELO3C026064 vs. NCBI nr
Match: gi|729325187|ref|XP_010534752.1| (PREDICTED: uncharacterized protein LOC104810252 [Tarenaya hassleriana])

HSP 1 Score: 136.3 bits (342), Expect = 9.3e-29
Identity = 100/345 (28.99%), Postives = 166/345 (48.12%), Query Frame = 1 

Query: 12   ILLGRQFLKTANAIVNIDKGLLSVEFDGNVVSCSIFDDVKSSNVHVSLCALDTLESL--- 71
            I+LGR FL TA A++N+ +G L++      V   +   +K  +V  + C +D LE L   
Sbjct: 709  IILGRPFLATAGAVINVKEGHLTLSIGEEKVEFKLAQSLKQPSVDDTCCYIDVLEQLADE 768

Query: 72   --KKLEEHDKFNELIDQATLEHVENEFAKNKPSDDDLSIFLDFVTSVNDEYVLVDNIATN 131
              ++L E D     +  + +E   ++        ++++++ + +    DE   + ++ T 
Sbjct: 769  ILEELREVDPLEVALMASKVETCVDQ--------EEVNVYSEIL----DEEATICSMETP 828

Query: 132  EHVP-ENDFVSSNEHDQGRNIKDDSEHILKSIVIENDHDTSIHIKNFEKENDLEKDYCEV 191
              +  E D + S +HD+              IV   +     H      +     +  +V
Sbjct: 829  CPIHNEVDDIESPQHDE--------------IVPNKNSKLRYH------DESTSPELHDV 888

Query: 192  SLHKECESSNTNELTR---PLQENGIKLKVLPSHLKYVFLGEKNTYHVIISKELTKEQEA 251
             L +E  +   N++     P     ++LK LP  L+Y FLG  ++Y VII+  L +   +
Sbjct: 889  CLVEEATTKTKNDIADEWDPKVAPKVELKPLPPGLRYEFLGPNSSYPVIINASLNELHTS 948

Query: 252  RLLETLKIHRQAIGA-----------------------KNKIQPQRRVNPNLKEFVKKEV 311
            +LL+TL+ HR+AIG                        K  I+ QRR+NPN+KE VKKE+
Sbjct: 949  KLLDTLRNHRKAIGYSLDDMKGIHPSICMHRILMEDGYKPSIEHQRRLNPNMKEVVKKEI 1008

Query: 312  FKLKDVGIIYPVPHSTWVSLIYVVPKKTGMTIVENSQGKFVHTRV 325
             KL D GIIYP+  S WVS + VVPKK G T+V+N + + + TR+
Sbjct: 1009 LKLLDAGIIYPISDSEWVSPVQVVPKKGGTTVVKNERNELIPTRI 1021

[Close]
BLAST of MELO3C026064 vs. NCBI nr
Match: gi|700198661|gb|KGN53819.1| (hypothetical protein Csa_4G151750 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 6.0e-28
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 1 

Query: 58  SLCALDTLESLKKLEEHDKFNELIDQATLEHVENEFAKNKPSDDDLSIFLDFVTSVNDEY 117
           SL  + T+E+     EHDKFNELI+Q TLE+ +N+FAK KPSD+DLSIFLDFVTS+NDE+
Sbjct: 5   SLIVIITIETF----EHDKFNELIEQETLEYFDNKFAKEKPSDNDLSIFLDFVTSINDEH 64

Query: 118 VLVDNIATNE-HVPENDFVSSNEHDQGRNIKDDSEHILKSIVIENDHDTS 167
           VLVDN+AT+E H   N   S  E+D GR+IKDD EHILK+I I+N+ DTS
Sbjct: 65  VLVDNVATHEQHALGNYLASGKEYDLGRDIKDDDEHILKTIGIDNEPDTS 110

[Close]
BLAST of MELO3C026064 vs. NCBI nr
Match: gi|731346890|ref|XP_010684693.1| (PREDICTED: uncharacterized protein LOC104899241 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 127.5 bits (319), Expect = 4.3e-26
Identity = 79/204 (38.73%), Postives = 110/204 (53.92%), Query Frame = 1 

Query: 144 RNIKDDSEHILKSIVIENDHDTSIHIKNFEKENDLEKDYCEVSLHKECE-SSNTNELTRP 203
           RN KD  E +L    +E++ +     KNF+   D    YC     +  E  S   E ++P
Sbjct: 792 RNKKDPLEDVLLGEDLEDNEEG----KNFKLAMDTSPTYCTKEKIEALEVPSPKEESSKP 851

Query: 204 LQENGIKLKVLPSHLKYVFLGEKNTYHVIISKELTKEQEARLLETLKIHRQAIGAK---- 263
             +  ++LK LP  LKY FLGE  TY V+++  L   Q  +LL+ L+ HR AIG      
Sbjct: 852 PPK--VELKPLPPSLKYAFLGEGETYPVMVNAMLEGTQLTQLLDVLREHRSAIGYSIEDL 911

Query: 264 -------------------NKIQPQRRVNPNLKEFVKKEVFKLKDVGIIYPVPHSTWVSL 323
                              + I+PQRR+NPN+KE VKKEV KL + GIIYP+  S WVS 
Sbjct: 912 KGLSPTLCMHRIHLDDDHASSIEPQRRLNPNMKEVVKKEVLKLLEAGIIYPISDSRWVSP 971

[Close]
BLAST of MELO3C026064 vs. NCBI nr
Match: gi|731333470|ref|XP_010677751.1| (PREDICTED: uncharacterized protein LOC104893354 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 127.5 bits (319), Expect = 4.3e-26
Identity = 75/180 (41.67%), Postives = 106/180 (58.89%), Query Frame = 1 

Query: 169  IKNFEKENDLEKDYCEVSLHKECESSNTNELTRPLQENGIKLKVLPSHLKYVFLGEKNTY 228
            + + + +ND +KD C++SL      S    +   +Q   ++LK LPSHLKYV+LGE  T 
Sbjct: 1345 VASLDLQND-KKDNCDLSL----PVSVPKLIPSIVQAPQLELKPLPSHLKYVYLGENETL 1404

Query: 229  HVIISKELTKEQEARLLETLKIHRQAIG-----------------------AKNKIQPQR 288
            HVIIS  L + QE +L   LK H++AIG                       AK   + QR
Sbjct: 1405 HVIISNALNQFQEDKLANVLKDHKEAIGWTLADIKGISPTLCMHRIFLEKDAKPMRESQR 1464

Query: 289  RVNPNLKEFVKKEVFKLKDVGIIYPVPHSTWVSLIYVVPKKTGMTIVENSQGKFVHTRVS 326
            R+NP++ E VKKE+ K  D  +IYP+  S WVS ++VVPKK+G+T+VEN++G+ V TRVS
Sbjct: 1465 RLNPSMMEVVKKEILKWLDADMIYPISDSQWVSPVHVVPKKSGITVVENTKGELVPTRVS 1519

The following BLAST results are available for this feature:
BLAST of MELO3C026064 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY93_CUCSA4.2e-2862.73Uncharacterized protein OS=Cucumis sativus GN=Csa_4G151750 PE=4 SV=1[more]
A0A151R5W3_CAJCA5.1e-2630.97Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan G... [more]
A0A151QMW0_CAJCA6.7e-2630.86Transposon Ty3-G Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_047970 PE=4 SV=1[more]
A0A151S3B5_CAJCA1.1e-2542.78Retrovirus-related Pol polyprotein from transposon 297 family (Fragment) OS=Caja... [more]
A0A151S3B5_CAJCA3.7e-1626.10Retrovirus-related Pol polyprotein from transposon 297 family (Fragment) OS=Caja... [more]
BLAST of MELO3C026064 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072254|ref|XP_008464440.1|1.7e-5972.02PREDICTED: uncharacterized protein LOC103502324 [Cucumis melo][more]
gi|729325187|ref|XP_010534752.1|9.3e-2928.99PREDICTED: uncharacterized protein LOC104810252 [Tarenaya hassleriana][more]
gi|700198661|gb|KGN53819.1|6.0e-2862.73hypothetical protein Csa_4G151750 [Cucumis sativus][more]
gi|731346890|ref|XP_010684693.1|4.3e-2638.73PREDICTED: uncharacterized protein LOC104899241 [Beta vulgaris subsp. vulgaris][more]
gi|731333470|ref|XP_010677751.1|4.3e-2641.67PREDICTED: uncharacterized protein LOC104893354 [Beta vulgaris subsp. vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026064T1MELO3C026064T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 260..307
score: 2.
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 257..308
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026064Cucumber (Gy14) v1cgymeB018
MELO3C026064Cucumber (Gy14) v1cgymeB527
MELO3C026064Cucumber (Gy14) v1cgymeB528
MELO3C026064Cucurbita maxima (Rimu)cmameB361
MELO3C026064Cucurbita moschata (Rifu)cmomeB358
MELO3C026064Wild cucumber (PI 183967)cpimeB017
MELO3C026064Wild cucumber (PI 183967)cpimeB451
MELO3C026064Cucumber (Chinese Long) v2cumeB004
MELO3C026064Watermelon (Charleston Gray)mewcgB136
MELO3C026064Watermelon (97103) v1mewmB164
MELO3C026064Watermelon (97103) v1mewmB165
MELO3C026064Cucurbita pepo (Zucchini)cpemeB032
MELO3C026064Cucurbita pepo (Zucchini)cpemeB477
MELO3C026064Bottle gourd (USVL1VR-Ls)lsimeB129
MELO3C026064Bottle gourd (USVL1VR-Ls)lsimeB176
MELO3C026064Cucumber (Gy14) v2cgybmeB016
MELO3C026064Cucumber (Gy14) v2cgybmeB396
MELO3C026064Silver-seed gourdcarmeB0050
MELO3C026064Cucumber (Chinese Long) v3cucmeB016
MELO3C026064Cucumber (Chinese Long) v3cucmeB029
MELO3C026064Watermelon (97103) v2mewmbB139