MELO3C025981 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025981
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSesquiterpene synthase
Locationchr11 : 13081761 .. 13082123 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCGTATTAAGTTGGTTTACTACATAAAGAAGCATCTTCTAGTGAACATAGGCGAGATGATAAGCGAGCACATAATAGCTTGGGTCAAGCATCCTTGCGGACTAAGACCCTTTCCGCAGTTAATAGAAAGATTGTGCTTGAAGACATACTCGACGTTAGAACAATTTCCTCAAGTAGAGTTGAAGGATGGGGTTTGGACTGTAGCAACTCTTCACCGCATAATTGCTGTCCATAAGAACAAGGCAAAGTTTAAACGCCACAAAACCAAACAAGATGGTAAATCCGAAGTTGAGAAAGTTGATGAGGAAGCTGAAGATGAGAAAGAGGATGAAGAAGTCCCACTAAAATGCAAACGGTAA

mRNA sequence

ATGGAGCGTATTAAGTTGGTTTACTACATAAAGAAGCATCTTCTAGTGAACATAGGCGAGATGATAAGCGAGCACATAATAGCTTGGGTCAAGCATCCTTGCGGACTAAGACCCTTTCCGCAGTTAATAGAAAGATTGTGCTTGAAGACATACTCGACGTTAGAACAATTTCCTCAAGTAGAGTTGAAGGATGGGGTTTGGACTGTAGCAACTCTTCACCGCATAATTGCTGTCCATAAGAACAAGGCAAAGTTTAAACGCCACAAAACCAAACAAGATGGTAAATCCGAAGTTGAGAAAGTTGATGAGGAAGCTGAAGATGAGAAAGAGGATGAAGAAGTCCCACTAAAATGCAAACGGTAA

Coding sequence (CDS)

ATGGAGCGTATTAAGTTGGTTTACTACATAAAGAAGCATCTTCTAGTGAACATAGGCGAGATGATAAGCGAGCACATAATAGCTTGGGTCAAGCATCCTTGCGGACTAAGACCCTTTCCGCAGTTAATAGAAAGATTGTGCTTGAAGACATACTCGACGTTAGAACAATTTCCTCAAGTAGAGTTGAAGGATGGGGTTTGGACTGTAGCAACTCTTCACCGCATAATTGCTGTCCATAAGAACAAGGCAAAGTTTAAACGCCACAAAACCAAACAAGATGGTAAATCCGAAGTTGAGAAAGTTGATGAGGAAGCTGAAGATGAGAAAGAGGATGAAGAAGTCCCACTAAAATGCAAACGGTAA

Protein sequence

MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR*
Homology
[Close]
BLAST of MELO3C025981 vs. TrEMBL
Match: A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29
Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 1 

Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MER+ LVY I K +LVNIG++IS HIIA VKHP G RPF  LIE+LCL+    LE+ PQV
Sbjct: 48  MERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQV 107

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           E+KDG+W  +TLHRIIA+HKNKAK K  KTK+  K   E  D++ E+E + + +P K KR
Sbjct: 108 EVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRKR 167

[Close]
BLAST of MELO3C025981 vs. TrEMBL
Match: A0A0A0LHW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14
Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 1 

Query: 1  MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
          MERI   Y I K + VNIG++ISEHI+AWVK P   R F  LI +L LK    LE+ PQV
Sbjct: 1  MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 61 ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQD 94
          +++DGVWT  TLH II   +N++K    KT QD
Sbjct: 61 KVEDGVWTPLTLHCIIRYSQNQSK---DKTPQD 90

[Close]
BLAST of MELO3C025981 vs. TrEMBL
Match: A0A0A0L9R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263220 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.0e-08
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 1 

Query: 21  MISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWTVATLHRIIAVHK 80
           MI+  ++ W+KHP   +PFP  +E+LC K   T  ++PQ+E+  G   +A L+R+ ++H 
Sbjct: 1   MINRALLGWMKHPKDTKPFPTRVEKLCHKYLPTFVRYPQIEM-GGRVNLAGLNRLRSIHS 60

Query: 81  NKAKFKRHKTKQDGKSEVEKVD 103
           NK    R KT++ G  E+E+ D
Sbjct: 61  NKEGLCRQKTQKQGGYELEQQD 81

[Close]
BLAST of MELO3C025981 vs. TrEMBL
Match: A0A0A0LAY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.2e-08
Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           M++I L+Y I + + VN+GE+I +HI+AW+KHP   RPF  LIE+LCLK   T ++  Q+
Sbjct: 116 MDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLTKKE-SQI 175

Query: 61  ELKD 65
           +++D
Sbjct: 176 KVED 178

[Close]
BLAST of MELO3C025981 vs. NCBI nr
Match: gi|700202594|gb|KGN57727.1| (hypothetical protein Csa_3G263250 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-29
Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 1 

Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MER+ LVY I K +LVNIG++IS HIIA VKHP G RPF  LIE+LCL+    LE+ PQV
Sbjct: 48  MERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQV 107

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           E+KDG+W  +TLHRIIA+HKNKAK K  KTK+  K   E  D++ E+E + + +P K KR
Sbjct: 108 EVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRKR 167

[Close]
BLAST of MELO3C025981 vs. NCBI nr
Match: gi|700206371|gb|KGN61490.1| (hypothetical protein Csa_2G145890 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14
Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 1 

Query: 1  MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
          MERI   Y I K + VNIG++ISEHI+AWVK P   R F  LI +L LK    LE+ PQV
Sbjct: 1  MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 61 ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQD 94
          +++DGVWT  TLH II   +N++K    KT QD
Sbjct: 61 KVEDGVWTPLTLHCIIRYSQNQSK---DKTPQD 90

[Close]
BLAST of MELO3C025981 vs. NCBI nr
Match: gi|659123193|ref|XP_008461541.1| (PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 7.7e-13
Identity = 40/67 (59.70%), Postives = 54/67 (80.60%), Query Frame = 1 

Query: 54  LEQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEE 113
           L++  QV++KD + + +TLH IIA+HKNKAK K  KTKQDGKS+V+ VD+E E+EKE ++
Sbjct: 2   LDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDEDEEEKEKDD 61

Query: 114 VPLKCKR 121
           VPLK KR
Sbjct: 62  VPLKRKR 68

[Close]
BLAST of MELO3C025981 vs. NCBI nr
Match: gi|700202591|gb|KGN57724.1| (hypothetical protein Csa_3G263220 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 5.7e-08
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 1 

Query: 21  MISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWTVATLHRIIAVHK 80
           MI+  ++ W+KHP   +PFP  +E+LC K   T  ++PQ+E+  G   +A L+R+ ++H 
Sbjct: 1   MINRALLGWMKHPKDTKPFPTRVEKLCHKYLPTFVRYPQIEM-GGRVNLAGLNRLRSIHS 60

Query: 81  NKAKFKRHKTKQDGKSEVEKVD 103
           NK    R KT++ G  E+E+ D
Sbjct: 61  NKEGLCRQKTQKQGGYELEQQD 81

[Close]
BLAST of MELO3C025981 vs. NCBI nr
Match: gi|700202971|gb|KGN58104.1| (hypothetical protein Csa_3G511970 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 7.5e-08
Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           M++I L+Y I + + VN+GE+I +HI+AW+KHP   RPF  LIE+LCLK   T ++  Q+
Sbjct: 116 MDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLTKKE-SQI 175

Query: 61  ELKD 65
           +++D
Sbjct: 176 KVED 178

The following BLAST results are available for this feature:
BLAST of MELO3C025981 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAN0_CUCSA1.1e-2957.50Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1[more]
A0A0A0LHW9_CUCSA1.3e-1452.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1[more]
A0A0A0L9R5_CUCSA4.0e-0837.80Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263220 PE=4 SV=1[more]
A0A0A0LAY9_CUCSA5.2e-0846.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1[more]
BLAST of MELO3C025981 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202594|gb|KGN57727.1|1.5e-2957.50hypothetical protein Csa_3G263250 [Cucumis sativus][more]
gi|700206371|gb|KGN61490.1|1.8e-1452.69hypothetical protein Csa_2G145890 [Cucumis sativus][more]
gi|659123193|ref|XP_008461541.1|7.7e-1359.70PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cucumis melo][more]
gi|700202591|gb|KGN57724.1|5.7e-0837.80hypothetical protein Csa_3G263220 [Cucumis sativus][more]
gi|700202971|gb|KGN58104.1|7.5e-0846.88hypothetical protein Csa_3G511970 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025981T1MELO3C025981T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 91..111
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025981Cucumber (Chinese Long) v3cucmeB431
MELO3C025981Cucumber (Chinese Long) v3cucmeB534
MELO3C025981Watermelon (97103) v2mewmbB094
MELO3C025981Watermelon (97103) v2mewmbB111
MELO3C025981Wax gourdmewgoB107
MELO3C025981Wax gourdmewgoB126
MELO3C025981Melon (DHL92) v3.5.1memeB041
MELO3C025981Cucumber (Gy14) v1cgymeB179
MELO3C025981Cucurbita maxima (Rimu)cmameB451
MELO3C025981Cucurbita maxima (Rimu)cmameB494
MELO3C025981Cucurbita maxima (Rimu)cmameB533
MELO3C025981Cucurbita moschata (Rifu)cmomeB443
MELO3C025981Cucurbita moschata (Rifu)cmomeB482
MELO3C025981Cucurbita moschata (Rifu)cmomeB523
MELO3C025981Wild cucumber (PI 183967)cpimeB419
MELO3C025981Wild cucumber (PI 183967)cpimeB522
MELO3C025981Cucumber (Chinese Long) v2cumeB425
MELO3C025981Cucumber (Chinese Long) v2cumeB448
MELO3C025981Watermelon (Charleston Gray)mewcgB092
MELO3C025981Watermelon (Charleston Gray)mewcgB109
MELO3C025981Watermelon (97103) v1mewmB110
MELO3C025981Watermelon (97103) v1mewmB127
MELO3C025981Cucurbita pepo (Zucchini)cpemeB257
MELO3C025981Cucurbita pepo (Zucchini)cpemeB667
MELO3C025981Bottle gourd (USVL1VR-Ls)lsimeB053
MELO3C025981Bottle gourd (USVL1VR-Ls)lsimeB088
MELO3C025981Cucumber (Gy14) v2cgybmeB367
MELO3C025981Cucumber (Gy14) v2cgybmeB454
MELO3C025981Silver-seed gourdcarmeB0197
MELO3C025981Silver-seed gourdcarmeB0350
MELO3C025981Silver-seed gourdcarmeB0799