MELO3C025973 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025973
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Locationchr11 : 13312206 .. 13312433 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGGCCACGATGGTTAAACGCTGGCGTTGTGAAACCGATGACGACAGAGACGGAGACGGGTGATCACCACAGAGACGGAGACAGAGGTGAAGACGGACTAGTGCGCGAAAGGAGGAGAATGGATGAAGAGACGCGCGGCGGCGACTTAGTGAGGGTACTGGAGATGACGAAGAAGAAGAAGCAGGAGGAGGGGTGTGTGTGCCGGCGCGCGTTAGGGTTATAA

mRNA sequence

ATGGGGCGGCCACGATGGTTAAACGCTGGCGTTGTGAAACCGATGACGACAGAGACGGAGACGGGTGATCACCACAGAGACGGAGACAGAGGTGAAGACGGACTAGTGCGCGAAAGGAGGAGAATGGATGAAGAGACGCGCGGCGGCGACTTAGTGAGGGTACTGGAGATGACGAAGAAGAAGAAGCAGGAGGAGGGGTGTGTGTGCCGGCGCGCGTTAGGGTTATAA

Coding sequence (CDS)

ATGGGGCGGCCACGATGGTTAAACGCTGGCGTTGTGAAACCGATGACGACAGAGACGGAGACGGGTGATCACCACAGAGACGGAGACAGAGGTGAAGACGGACTAGTGCGCGAAAGGAGGAGAATGGATGAAGAGACGCGCGGCGGCGACTTAGTGAGGGTACTGGAGATGACGAAGAAGAAGAAGCAGGAGGAGGGGTGTGTGTGCCGGCGCGCGTTAGGGTTATAA

Protein sequence

MGRPRWLNAGVVKPMTTETETGDHHRDGDRGEDGLVRERRRMDEETRGGDLVRVLEMTKKKKQEEGCVCRRALGL*
Homology
[Close]
BLAST of MELO3C025973 vs. TrEMBL
Match: E5GCG0_CUCME (NBS-LRR type resistance protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.8e-06
Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 1 

Query: 1   MGRPRWLNAGVVKPMTTETETGDHHR----DGDRGEDGLVRERRRMDEETRGGDLVRVLE 60
           M RPR  + GV KP TTET+TGDHHR    DGDRG DG   ER R     R G +    E
Sbjct: 254 MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERW----RDGGVKMKKE 313

Query: 61  MTKKKKQ 64
            TK+K++
Sbjct: 314 KTKRKRR 316

[Close]
BLAST of MELO3C025973 vs. NCBI nr
Match: gi|307136344|gb|ADN34159.1| (NBS-LRR type resistance protein [Cucumis melo subsp. melo])

HSP 1 Score: 57.8 bits (138), Expect = 9.8e-06
Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 1 

Query: 1   MGRPRWLNAGVVKPMTTETETGDHHR----DGDRGEDGLVRERRRMDEETRGGDLVRVLE 60
           M RPR  + GV KP TTET+TGDHHR    DGDRG DG   ER R     R G +    E
Sbjct: 254 MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERW----RDGGVKMKKE 313

Query: 61  MTKKKKQ 64
            TK+K++
Sbjct: 314 KTKRKRR 316

The following BLAST results are available for this feature:
BLAST of MELO3C025973 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCG0_CUCME6.8e-0650.75NBS-LRR type resistance protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C025973 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136344|gb|ADN34159.1|9.8e-0650.75NBS-LRR type resistance protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025973T1MELO3C025973T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025973Cucurbita maxima (Rimu)cmameB451
MELO3C025973Cucurbita maxima (Rimu)cmameB494
MELO3C025973Cucurbita maxima (Rimu)cmameB533
MELO3C025973Cucurbita moschata (Rifu)cmomeB443
MELO3C025973Cucurbita moschata (Rifu)cmomeB482
MELO3C025973Cucurbita moschata (Rifu)cmomeB523
MELO3C025973Wild cucumber (PI 183967)cpimeB419
MELO3C025973Wild cucumber (PI 183967)cpimeB522
MELO3C025973Cucumber (Chinese Long) v2cumeB448
MELO3C025973Watermelon (Charleston Gray)mewcgB092
MELO3C025973Watermelon (Charleston Gray)mewcgB109
MELO3C025973Watermelon (97103) v1mewmB110
MELO3C025973Watermelon (97103) v1mewmB127
MELO3C025973Cucurbita pepo (Zucchini)cpemeB257
MELO3C025973Cucurbita pepo (Zucchini)cpemeB667
MELO3C025973Bottle gourd (USVL1VR-Ls)lsimeB053
MELO3C025973Bottle gourd (USVL1VR-Ls)lsimeB088
MELO3C025973Cucumber (Gy14) v2cgybmeB367
MELO3C025973Cucumber (Gy14) v2cgybmeB454
MELO3C025973Silver-seed gourdcarmeB0197
MELO3C025973Silver-seed gourdcarmeB0350
MELO3C025973Silver-seed gourdcarmeB0799
MELO3C025973Cucumber (Chinese Long) v3cucmeB431
MELO3C025973Cucumber (Chinese Long) v3cucmeB534
MELO3C025973Watermelon (97103) v2mewmbB094
MELO3C025973Watermelon (97103) v2mewmbB111
MELO3C025973Wax gourdmewgoB107
MELO3C025973Wax gourdmewgoB126
MELO3C025973Melon (DHL92) v3.5.1memeB041
MELO3C025973Cucumber (Gy14) v1cgymeB119
MELO3C025973Cucumber (Gy14) v1cgymeB179