MELO3C025834 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025834
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, Ty3-gypsy subclass
Location	chr4 : 17852867 .. 17854601 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACCTCTTCAGAAACCGATTCTTCTACTGAAGAAAAAGGTATCAACATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGCGATGACGACGGAGCAATTCCCTGCACAGGAATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTCCCGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTCAAAGTCCAATCATCTACTCGTTTCAAGATATTCTAAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACATCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTCAAATTCCAAAAGAAGCCCCAGGAACTTCCTCAACCAATCCCGACAGATATTCGAAGGGAAAGGCACTGCTGATTAAAGAGTCCGGTGAAACCGGTAGTATCAATTATATCAGCAAAGTTCAAAATAAAAAATGTATGTCAAAAATAGTCTTTAAAGTTAAAGACTTTCAACTCGAGACTCTCACCCTCATCGATTCGGGAGCGGATCAAAATGTCATCTAAGAAAGGCTCCTTCCTTCTCGATATTTTGAAAAAACAAAGGAATCTTTGAGTGGAGCCAGTGGGAATCCTCTCAACATCCAATTCAAGCTTTCAAAGGTACACGTTTGCAAGGGAGAGGTGTGCCTCATCAACACATTCATTTTGGTTATTGACAACAATGTTGAACTCCATTCCTAACCCAGTTATATCCCTTCCATGTCACCGACAAGGGTATAACCTCAAGAAAGTTCGATAAAGAGATTACTTTCGAGTTTACTCATCCAGTAACTCCTAAGTATATTTCCAACATTGAAGAAGAAATTCATCAATTCATCAACCACATCGCCATAAAGGAAAAGCAAATTGAATTCCTCCAAGATGAAGTCATAATCGAAAGAGTGGTCGCTCAGATCAATCAGCCTGCCACTCAACGACGCATTAAAGATTTCCAATCCAAGTTGGAAAAGGAAGTCAGTTCAAATATCCCAAATGCCTTTTGGGATCAGAAGAGACACATGGTAACCCTACCATATGTTGATGGATTTGAAGAGGCCCAGATTCCTACAAAGGCTAGGCCCATTCAAATGAATAGAGATCTCATCAGAACCTGCATTGCGGAAATCAATGATCTCCTAAAAAAAAGCCTTATCAACCCATCAAAAAGCCCATGGTCTTGTGCGGCTTTTTACGTCAACAATCAGGCCGAAAAGGAACGTGGTGTCCCAAGGCTTGTCATCAATTACAAGCCCCTTAACAAGGTTCTCAAATGGATTAGGTATCCAATTCCTAATCGTCAAGACTTGCTAAAAAGAATCACTACGGCAAAAGTTTTCTCAAAGTTTGACATGAAGCCAGGATTTTGGGAAGTTCAAATTCATCCTAATGACTGTTACAAAACGACCTTCAATGTTCCATTTGGACAATATCAATGGAATGTCATGCCATTTGGATTGAAGAATGCTCCATCCGAATTCCAGAAGATAATGAATGATATCTTCAACCAATATTAAGAATTCACAATAGTCTATATTGATGATGTCTTGGTGTTTTCCGACACAGT

mRNA sequence

ATGACACCTCTTCAGAAACCGATTCTTCTACTGAAGAAAAAGGTATCAACATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGCGATGACGACGGAGCAATTCCCTGCACAGGAATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTCCCGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTCAAAGTCCAATCATCTACTCGTTTCAAGATATTCTAAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACATCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTCAAATTCCAAAAGAAGCCCCAGGAACTTCCTCAACCAATCCCGACAGATATTCGAAGGGAAAGGCACTGCTGATTAAAGAGTCCGGTGAAACCGTAACTCCTAAGTATATTTCCAACATTGAAGAAGAAATTCATCAATTCATCAACCACATCGCCATAAAGGAAAAGCAAATTGAATTCCTCCAAGATGAAGTCATAATCGAAAGAGTGGTCGCTCAGATCAATCAGCCTGCCACTCAACGACGCATTAAAGATTTCCAATCCAAGTTGGAAAAGGAAGTCAGTTCAAATATCCCAAATGCCTTTTGGGATCAGAAGAGACACATGGTAACCCTACCATATGTTGATGGATTTGAAGAGGCCCAGATTCCTACAAAGGCTAGGCCCATTCAAATGAATAGAGATCTCATCAGAACCTGCATTGCGGAAATCAATGATCTCCTAAAAAAAAGCCTTATCAACCCATCAAAAAGCCCATGGTCTTGTGCGGCTTTTTACGTCAACAATCAGGCCGAAAAGGAACGTGGTGTCCCAAGGCTTGTCATCAATTACAAGCCCCTTAACAAGGTTCTCAAATGGATTAGGTATCCAATTCCTAATCGTCAAGACTTGCTAAAAAGAATCACTACGGCAAAAGTTTTCTCAAAGTTTGACATGAAGCCAGGATTTTGGGAAGTTCAAATTCATCCTAATGACTGTTACAAAACGACCTTCAATGTTCCATTTGGACAATATCAATGGAATGTCATGCCATTTGGATTGAAGAATGCTCCATCCGAATTCCAGAAGATAATGAATGATATCTTCAACCAATATTAAGAATTCACAATAGTCTATATTGATGATGTCTTGGTGTTTTCCGACACAGT

Coding sequence (CDS)

ATGACACCTCTTCAGAAACCGATTCTTCTACTGAAGAAAAAGGTATCAACATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGCGATGACGACGGAGCAATTCCCTGCACAGGAATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTCCCGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTCAAAGTCCAATCATCTACTCGTTTCAAGATATTCTAAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACATCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTCAAATTCCAAAAGAAGCCCCAGGAACTTCCTCAACCAATCCCGACAGATATTCGAAGGGAAAGGCACTGCTGATTAAAGAGTCCGGTGAAACCGTAACTCCTAAGTATATTTCCAACATTGAAGAAGAAATTCATCAATTCATCAACCACATCGCCATAAAGGAAAAGCAAATTGAATTCCTCCAAGATGAAGTCATAATCGAAAGAGTGGTCGCTCAGATCAATCAGCCTGCCACTCAACGACGCATTAAAGATTTCCAATCCAAGTTGGAAAAGGAAGTCAGTTCAAATATCCCAAATGCCTTTTGGGATCAGAAGAGACACATGGTAACCCTACCATATGTTGATGGATTTGAAGAGGCCCAGATTCCTACAAAGGCTAGGCCCATTCAAATGAATAGAGATCTCATCAGAACCTGCATTGCGGAAATCAATGATCTCCTAAAAAAAAGCCTTATCAACCCATCAAAAAGCCCATGGTCTTGTGCGGCTTTTTACGTCAACAATCAGGCCGAAAAGGAACGTGGTGTCCCAAGGCTTGTCATCAATTACAAGCCCCTTAACAAGGTTCTCAAATGGATTAGGTATCCAATTCCTAATCGTCAAGACTTGCTAAAAAGAATCACTACGGCAAAAGTTTTCTCAAAGTTTGACATGAAGCCAGGATTTTGGGAAGTTCAAATTCATCCTAATGACTGTTACAAAACGACCTTCAATGTTCCATTTGGACAATATCAATGGAATGTCATGCCATTTGGATTGAAGAATGCTCCATCCGAATTCCAGAAGATAATGAATGATATCTTCAACCAATATTAA

Protein sequence

MTPLQKPILLLKKKVSTFSTMKDPPMKMPSTLKATQAMTTEQFPAQECASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY*

Homology

[Close]

BLAST of MELO3C025834 vs. Swiss-Prot
Match: POLG_PVCV1 (Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.2e-37
Identity = 81/174 (46.55%), Postives = 107/174 (61.49%), Query Frame = 1


Query: 254  SNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINP 313
            S   +  W  +   + LP+     E   PTKA    MN + ++  I E ++L +  LI P
Sbjct: 1359 SKCSHPLWLNQDFFIQLPFKKN--ENINPTKASHSGMNPEHLQLAIKECDELQQFDLIEP 1418

Query: 314  SKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFS 373
            S S W+C AFYVN ++E+ RG  RLVINY+PLN  L+  ++PIPN+  L   ++ AK+FS
Sbjct: 1419 SDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFS 1478

Query: 374  KFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIF 428
            KFD+K GFW++ IHPN+  KT F +P   +QW VMPFGLK APS FQK M  IF
Sbjct: 1479 KFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIF 1530

[Close]

BLAST of MELO3C025834 vs. Swiss-Prot
Match: POLG_PVCV2 (Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-36
Identity = 80/174 (45.98%), Postives = 107/174 (61.49%), Query Frame = 1


Query: 254  SNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINP 313
            S   +  W  +   + LP+     E   PTKA    MN + ++  + E ++L +  LI P
Sbjct: 1360 SKCSHPLWLNQDFFIQLPFKRN--ENINPTKASHSGMNPEHLQLALKECDELQQFDLIEP 1419

Query: 314  SKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFS 373
            S S W+C AFYVN ++E+ RG  RLVINY+PLN  L+  ++PIPN+  L   ++ AK+FS
Sbjct: 1420 SDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFS 1479

Query: 374  KFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIF 428
            KFD+K GFW++ IHPN+  KT F +P   +QW VMPFGLK APS FQK M  IF
Sbjct: 1480 KFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIF 1531

[Close]

BLAST of MELO3C025834 vs. Swiss-Prot
Match: POL_CAMVS (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.9e-30
Identity = 85/249 (34.14%), Postives = 128/249 (51.41%), Query Frame = 1


Query: 183 IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIK 242
           +K+  +T  P+ ++    +I   +  IAI  +     ++++ I           TQ+R++
Sbjct: 162 MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFI-----------TQQRMQ 221

Query: 243 DFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-PTKARPIQMNRDLIRTCIAE 302
             +  LEK  S N  +    ++    ++   D  +  ++ P K  P  M+R+     I E
Sbjct: 222 KIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSP--MDREEFDKQIKE 281

Query: 303 INDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQD 362
           + DL    +I PSKSP    AF VNN+AEK RG  R+V+NYK +NK      Y +PN+ +
Sbjct: 282 LLDL---KVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDE 341

Query: 363 LLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQK 422
           LL  I   K+FS FD K GFW+V +       T F  P G Y+WNV+PFGLK APS FQ+
Sbjct: 342 LLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQR 394

Query: 423 IMNDIFNQY 431
            M++ F  +
Sbjct: 402 HMDEAFRVF 394

[Close]

BLAST of MELO3C025834 vs. Swiss-Prot
Match: POL_CAMVE (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.8e-30
Identity = 85/249 (34.14%), Postives = 128/249 (51.41%), Query Frame = 1


Query: 183 IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIK 242
           +K+  +T  P+ ++    +I   +  IAI  +     ++++ I           TQ+R++
Sbjct: 162 MKKRSKTQQPEPVNISTNKIENPLKEIAILSEGRRLSEEKLFI-----------TQQRMQ 221

Query: 243 DFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-PTKARPIQMNRDLIRTCIAE 302
             +  LEK  S N  +    ++    ++   D  +  ++ P K  P  M+R+     I E
Sbjct: 222 KIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSP--MDREEFDKQIKE 281

Query: 303 INDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQD 362
           + DL    +I PSKSP    AF VNN+AEK RG  R+V+NYK +NK      Y +PN+ +
Sbjct: 282 LLDL---KVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDE 341

Query: 363 LLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQK 422
           LL  I   K+FS FD K GFW+V +       T F  P G Y+WNV+PFGLK APS FQ+
Sbjct: 342 LLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQR 394

Query: 423 IMNDIFNQY 431
            M++ F  +
Sbjct: 402 HMDEAFRVF 394

[Close]

BLAST of MELO3C025834 vs. Swiss-Prot
Match: POL_CAMVC (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.8e-30
Identity = 85/249 (34.14%), Postives = 128/249 (51.41%), Query Frame = 1


Query: 183 IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIK 242
           +K+  +T  P+ ++    +I   +  IAI  +     ++++ I           TQ+R++
Sbjct: 162 MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFI-----------TQQRMQ 221

Query: 243 DFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-PTKARPIQMNRDLIRTCIAE 302
             +  LEK  S N  +    ++    ++   D  +  ++ P K  P  M+R+     I E
Sbjct: 222 KIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSP--MDREEFDKQIKE 281

Query: 303 INDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQD 362
           + DL    +I PSKSP    AF VNN+AEK RG  R+V+NYK +NK      Y +PN+ +
Sbjct: 282 LLDL---KVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDE 341

Query: 363 LLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQK 422
           LL  I   K+FS FD K GFW+V +       T F  P G Y+WNV+PFGLK APS FQ+
Sbjct: 342 LLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQR 394

Query: 423 IMNDIFNQY 431
            M++ F  +
Sbjct: 402 HMDEAFRVF 394

[Close]

BLAST of MELO3C025834 vs. TrEMBL
Match: Q8H6Q8_PONTR (CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 3.3e-81
Identity = 144/238 (60.50%), Postives = 185/238 (77.73%), Query Frame = 1


Query: 193  KYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEV 252
            K  S  +  I+  IN    K+  + FLQ ++ ++R+   + +   +R+I DF++ +EKE+
Sbjct: 2520 KACSIYQNRINNLINS---KQNDLTFLQKDLSLQRIENDLQRDFIKRKIFDFKTLIEKEI 2579

Query: 253  SSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLIN 312
             +++P+AFW++K+HMV LPY + F+E QIPTKARPIQMN DL R C  EINDL+KK LI 
Sbjct: 2580 CADLPSAFWNRKQHMVDLPYENSFDEKQIPTKARPIQMNMDLERHCKEEINDLVKKGLIV 2639

Query: 313  PSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVF 372
             S+SPWSCAAFYVN  +E ERG PRLVINYKPLNK LKWIRYPIPN++DLL+++ +A +F
Sbjct: 2640 KSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKALKWIRYPIPNKKDLLQKLHSAFIF 2699

Query: 373  SKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
            SKFDMK GFW++QIHP D YKT F VPFGQY+W VMPFGLKNAPSEFQ+IMNDI+N Y
Sbjct: 2700 SKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPY 2754

[Close]

BLAST of MELO3C025834 vs. TrEMBL
Match: Q8H6Q8_PONTR (CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 5.5e-76
Identity = 174/431 (40.37%), Postives = 244/431 (56.61%), Query Frame = 1


Query: 56   INVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPII----YSFQDIL 115
            IN++TKDQET  +L++ + D + ++ YL KL +++ + N  +  + PI+    Y   +IL
Sbjct: 878  INILTKDQETFLELVKHISDPNLQKEYLEKLLKTM-DFNKAETSKVPIVKKNSYDLTEIL 937

Query: 116  NRIKGETKKPI-QVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSST 175
            +  K +TKK +  ++DL  EIK +K E  D K++     +  Q   +  +  ++   S+ 
Sbjct: 938  D--KKKTKKSVPNIQDLQKEIKDIKSEIKDLKEKQKSDSETIQLLLQKHLQDDSDNESTH 997

Query: 176  NPDRYSKGKALLIKESGETVTPKYISNIEEEIHQFI--------NHIAIKEKQI---EFL 235
            + +   +                 + NIE   H F+            IK   I   +F 
Sbjct: 998  SENHIEQN----------------VDNIESVPHDFLFVLKQVTTRKYLIKATLIFSNDFA 1057

Query: 236  QDEVIIERVVAQIN-----------QPATQRRI---KDFQSKLEKEVSSNIPNAFWD--- 295
             D + +    A +N              T+ R+    + + K++ +V ++I N  ++   
Sbjct: 1058 IDAIALFDTGADLNCIRQDIVPKRFHEKTKERLSAANNSKLKVDSKVEASIHNNGFEFKT 1117

Query: 296  -----------------------QKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCI 355
                                    K+HMV LPY + F+E QIPTKARPIQMN DL R C 
Sbjct: 1118 SFILTNDIHHAVILGTPFINLITPKQHMVDLPYENSFDEKQIPTKARPIQMNMDLERHCK 1177

Query: 356  AEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNR 415
             EINDL+KK LI  S+SPWSCAAFYVN  +E ERG PRLVINYKPLNK LKWIRYPIPN+
Sbjct: 1178 EEINDLVKKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKALKWIRYPIPNK 1237

Query: 416  QDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEF 431
            +DLL+++ +A +FSKFDMK  FW++QIHP + YKT F VPFGQY+W VMPFGLKNAPSEF
Sbjct: 1238 KDLLQKLHSAFIFSKFDMKSVFWQIQIHPKERYKTAFTVPFGQYEWTVMPFGLKNAPSEF 1289

HSP 2 Score: 55.5 bits (132), Expect = 1.9e-04
Identity = 41/156 (26.28%), Postives = 76/156 (48.72%), Query Frame = 1


Query: 56   INVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPII----YSFQDIL 115
            INV+TKDQET  +L++ + D + ++ YL KL +++ + N  +  + PI+    Y   +IL
Sbjct: 2242 INVLTKDQETFLELVKHISDPNLQKEYLEKLLKTM-DFNKAETSKVPIVKKNSYDLTEIL 2301

Query: 116  NRIKGETKKPI-QVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSST 175
            +  K +TKK +  ++DL  EIK +K E  D K++     +  Q   +  +  ++   S+ 
Sbjct: 2302 D--KKKTKKSVPNIQDLQKEIKDIKSEIKDLKEKQKSDSETIQLLLQKHLQDDSDNESTH 2361

Query: 176  NPDRYSKGKALLIKESGETVTPKYISNIEEEIHQFI 207
            + +   +                 + NIE   H F+
Sbjct: 2362 SENHIEQN----------------VDNIESVPHDFL 2378

HSP 3 Score: 296.6 bits (758), Expect = 4.9e-77
Identity = 159/318 (50.00%), Postives = 206/318 (64.78%), Query Frame = 1


Query: 128 HLEIKVLKREFADN------KQRLTHLEQAFQAFQEIQ--IPKEAPGTSSTNP----DRY 187
           H   K+++ + +D       KQR   ++Q F   ++++  +    P  SS  P    D+ 
Sbjct: 201 HKAFKIVETDASDIGFGGILKQRSICIKQTFILVKDLKEKVLLGVPFLSSIFPMWVDDQG 260

Query: 188 SKGKAL---LIKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQI 247
            K K L   ++ E       + I+ I++++      I  K+  I  L+ E+ + R+  Q+
Sbjct: 261 IKTKLLDKEILFEFANPPGERSINTIKDQV------IKAKQNHINLLKQEIALVRIEDQL 320

Query: 248 NQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNR 307
               TQ  I+  ++K+ KEV SNIPNAFW +K H V LPY   F E  IPTKARPIQMN+
Sbjct: 321 KIKKTQDAIESLKNKIIKEVCSNIPNAFWHRKXHEVELPYEPDFSEKNIPTKARPIQMNK 380

Query: 308 DLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWI 367
           DL+  C  EI DL+ K LI  SKSPWSC+AFYV  QAE ERG PRLVINYKPLN VL+WI
Sbjct: 381 DLLSYCEKEIQDLMDKKLIRKSKSPWSCSAFYVQKQAELERGTPRLVINYKPLNDVLRWI 440

Query: 368 RYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGL 427
           RYPIPN++DLL+R+  +KVFSKFDMK GFW++QI   D YKT F VPFG Y+WNVMPFGL
Sbjct: 441 RYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAEKDRYKTAFVVPFGHYEWNVMPFGL 500

Query: 428 KNAPSEFQKIMNDIFNQY 431
           KNAPSEFQ IMN+IFNQ+
Sbjct: 501 KNAPSEFQNIMNEIFNQF 512

[Close]

BLAST of MELO3C025834 vs. TrEMBL
Match: A5C143_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023373 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 119/199 (59.80%), Postives = 145/199 (72.86%), Query Frame = 1


Query: 209  IAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMV 268
            I  K+  I  L+ E+ + R+  Q+    TQ  I+  ++K+ KEV SNIPNAFW +K+H V
Sbjct: 1332 IKAKKNHINLLKQEIALVRIEDQLKIKKTQDAIESLKNKIIKEVCSNIPNAFWHRKQHEV 1391

Query: 269  TLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQ 328
             LPY   F E  IPTKARPIQMN+DL+  C  EI DL+ K LI  SKSPWSC+AFYV  Q
Sbjct: 1392 ELPYEPDFSEKNIPTKARPIQMNKDLLSYCEKEIQDLMDKKLIRKSKSPWSCSAFYVQKQ 1451

Query: 329  AEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHP 388
            AE ERG PRLVINYKPLN VL+WIRYPIPN++DLL+R+  +KVFSKFDMK GFW++QI  
Sbjct: 1452 AELERGTPRLVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAE 1511

Query: 389  NDCYKTTFNVPFGQYQWNV 408
             D YKT F VPFG Y+WN+
Sbjct: 1512 KDRYKTAFVVPFGHYEWNI 1530

HSP 2 Score: 93.2 bits (230), Expect = 8.3e-16
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 1


Query: 377 MKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
           MK GFW++QI   D YKT F VPFG Y+WNVMPFGLKNAPSEFQ IMN+IFNQ+
Sbjct: 1   MKSGFWQIQIAEKDRYKTAFVVPFGHYEWNVMPFGLKNAPSEFQNIMNEIFNQF 54

HSP 3 Score: 295.4 bits (755), Expect = 1.1e-76
Identity = 140/222 (63.06%), Postives = 167/222 (75.23%), Query Frame = 1


Query: 209 IAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMV 268
           I  K+  I  L+ E+ + R+  Q+    TQ  I+  ++K+ KEV SNIPNAFW +K+H V
Sbjct: 705 IKAKKNHINLLKQEIALVRIEDQLKIKKTQDAIESLKNKIIKEVCSNIPNAFWHRKQHEV 764

Query: 269 TLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQ 328
            LPY   F E  IPTKARPIQMN+DL+  C  EI DL+ K LI  SKSPWSC+AFYV  Q
Sbjct: 765 ELPYEPDFSEKNIPTKARPIQMNKDLLSYCEKEIQDLMDKKLIRKSKSPWSCSAFYVQKQ 824

Query: 329 AEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHP 388
           AE ERG PRLVINYKPLN VL+WIRYPIPN++DLL+R+  +KVFSKFDMK GFW++QI  
Sbjct: 825 AELERGTPRLVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAE 884

Query: 389 NDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
            D YKT F VPFG Y+WNVMPFGLKNAPSEFQ IMN+IFNQ+
Sbjct: 885 KDRYKTAFVVPFGHYEWNVMPFGLKNAPSEFQNIMNEIFNQF 926

[Close]

BLAST of MELO3C025834 vs. TrEMBL
Match: A5BVJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018870 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.4e-76
Identity = 140/222 (63.06%), Postives = 166/222 (74.77%), Query Frame = 1


Query: 209 IAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMV 268
           I  K+  I  L+ E+ + R+  Q+    TQ  I+  ++K+ KEV SNIPNAFW +K+H V
Sbjct: 664 IXAKQNHINLLKQEIALVRIEDQLKVKKTQDAIESLKNKIIKEVCSNIPNAFWHRKQHEV 723

Query: 269 TLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQ 328
            LPY   F E  IPTKARPIQMN+DL+  C  EI DL  K LI  SKSPWSC+AFYV  Q
Sbjct: 724 ELPYEPDFSEKNIPTKARPIQMNKDLLSYCEKEIQDLXDKKLIRKSKSPWSCSAFYVQKQ 783

Query: 329 AEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHP 388
           AE ERG PRLVINYKPLN VL+WIRYPIPN++DLL+R+  +KVFSKFDMK GFW++QI  
Sbjct: 784 AELERGTPRLVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAE 843

Query: 389 NDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
            D YKT F VPFG Y+WNVMPFGLKNAPSEFQ IMN+IFNQ+
Sbjct: 844 KDRYKTAFVVPFGHYEWNVMPFGLKNAPSEFQNIMNEIFNQF 885

[Close]

BLAST of MELO3C025834 vs. TrEMBL
Match: A5BVJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018870 PE=4 SV=1)

HSP 1 Score: 35.8 bits (81), Expect = 1.6e+02
Identity = 20/71 (28.17%), Postives = 35/71 (49.30%), Query Frame = 1


Query: 105  YSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQ----RLTHLEQAFQAFQEIQI 164
            Y+  DILNR   ++ K + +++LH E+K  K E  + +Q     L+ L+         +I
Sbjct: 2262 YNLNDILNRFDQQSPKDVSIKELHEEVKQHKXEIKELRQFISLGLSDLQDQINRIGNQEI 2321

Query: 165  PKEAPGTSSTN 172
              + P +S  N
Sbjct: 2322 HMDIPESSHVN 2332

HSP 2 Score: 288.9 bits (738), Expect = 1.0e-74
Identity = 142/256 (55.47%), Postives = 184/256 (71.88%), Query Frame = 1


Query: 179  KALLIKESGETVTPKYISNIEEEIHQFINHI--AIKEKQ--IEFLQDEVIIERVVAQINQ 238
            K++     G+ V   + S  +E +   +NH+  AI+ K+  I  + DE+   R+   +  
Sbjct: 817  KSIQFTIKGKKVELMFASQPKETL---LNHLKEAIRHKEQFIHEIADEIKKVRIDKTLED 876

Query: 239  PATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDL 298
            P  + +IK  + K  K++ S+IP+AFW +K+H+VTLPY+ GF E +IPTKARPIQMN  L
Sbjct: 877  PKFKIKIKALEDKFIKDLCSDIPSAFWHRKKHVVTLPYISGFSEDKIPTKARPIQMNSRL 936

Query: 299  IRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRY 358
            +  C +EIN+LLKK LI  S +PWSCAAFYV N AEKERGVPRLVINYKPLNKVL+WIRY
Sbjct: 937  LEICKSEINELLKKGLIRKSSAPWSCAAFYVENAAEKERGVPRLVINYKPLNKVLQWIRY 996

Query: 359  PIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKN 418
            PIP + DL++RI  ++++SKFDMK GFW++QI   D YKT F  PFG Y+WNVM FGLKN
Sbjct: 997  PIPYKHDLIRRIQGSQIYSKFDMKSGFWQIQIKEEDRYKTAFTTPFGHYEWNVMTFGLKN 1056

Query: 419  APSEFQKIMNDIFNQY 431
            APSEFQKIMN+IF  Y
Sbjct: 1057 APSEFQKIMNEIFLPY 1069

[Close]

BLAST of MELO3C025834 vs. NCBI nr
Match: gi|645254718|ref|XP_008233166.1| (PREDICTED: uncharacterized protein LOC103332224 [Prunus mume])

HSP 1 Score: 322.8 bits (826), Expect = 9.2e-85
Identity = 176/407 (43.24%), Postives = 251/407 (61.67%), Query Frame = 1


Query: 61  KDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKK 120
           + +E + DLI ++ + + K  YL KLR+ + +++   +I  PII +        K   KK
Sbjct: 113 EQEELLIDLISRVENPELKSEYLKKLRKVISQESPSSSIPQPIILN----TTLEKFNRKK 172

Query: 121 PIQVEDLHLEIKVLKREFADNKQRLTHLEQA------------FQAFQEIQIP------- 180
            + ++DL LE+K++K+E  + KQ L  L +                 QE  IP       
Sbjct: 173 EVTLQDLQLEVKMVKKEIVELKQDLVRLLEKESSESRSQSGADLNCIQEGLIPTKYYQKS 232

Query: 181 KEAPGTSSTN--------PDRYSKGKALLIKESGETVTPKYISNIEEEIH-------QFI 240
           KE+  T+S          P  +     ++    GE V  +++S  + EIH       QF+
Sbjct: 233 KESLSTASGKSLQLNYEIPKAHVDYDGVISTYLGEQVKFEFLS--KPEIHNLRALQKQFV 292

Query: 241 N---HIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQ 300
           +    +  K KQ+ FL++E+  +RV  Q++  + Q +I+ F++KL+ E+ S++PNAFW +
Sbjct: 293 SKSIQVIRKVKQLNFLKEEIKFKRVEQQLSNESLQLQIQQFENKLKNEICSDLPNAFWYR 352

Query: 301 KRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAF 360
           K+H+V LPY+  F E  IPTKARPIQM+++++  C  EI++LL+K +I  SKSPWSC AF
Sbjct: 353 KQHVVNLPYIKTFSEKNIPTKARPIQMSQEIMEFCKKEIHELLQKKMIRKSKSPWSCPAF 412

Query: 361 YVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWE 420
           YV   AE ERGVP LVINYKPLN VL+WIRYPIPN++DL+ R+  + V+SKFDMK GFW+
Sbjct: 413 YVQKNAELERGVPILVINYKPLNSVLEWIRYPIPNKRDLINRLEKSVVYSKFDMKSGFWQ 472

Query: 421 VQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
           +QI  +D YKT F  PFG Y+WNVMPFGLKNAPSEFQ IMN IFN Y
Sbjct: 473 IQIDESDRYKTAFVTPFGHYEWNVMPFGLKNAPSEFQNIMNKIFNPY 513

[Close]

BLAST of MELO3C025834 vs. NCBI nr
Match: gi|24461860|gb|AAN62347.1|AF506028_14 (CTV.20 [Citrus trifoliata])

HSP 1 Score: 310.5 bits (794), Expect = 4.7e-81
Identity = 144/238 (60.50%), Postives = 185/238 (77.73%), Query Frame = 1


Query: 193  KYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEV 252
            K  S  +  I+  IN    K+  + FLQ ++ ++R+   + +   +R+I DF++ +EKE+
Sbjct: 2520 KACSIYQNRINNLINS---KQNDLTFLQKDLSLQRIENDLQRDFIKRKIFDFKTLIEKEI 2579

Query: 253  SSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLIN 312
             +++P+AFW++K+HMV LPY + F+E QIPTKARPIQMN DL R C  EINDL+KK LI 
Sbjct: 2580 CADLPSAFWNRKQHMVDLPYENSFDEKQIPTKARPIQMNMDLERHCKEEINDLVKKGLIV 2639

Query: 313  PSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVF 372
             S+SPWSCAAFYVN  +E ERG PRLVINYKPLNK LKWIRYPIPN++DLL+++ +A +F
Sbjct: 2640 KSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKALKWIRYPIPNKKDLLQKLHSAFIF 2699

Query: 373  SKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
            SKFDMK GFW++QIHP D YKT F VPFGQY+W VMPFGLKNAPSEFQ+IMNDI+N Y
Sbjct: 2700 SKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPY 2754

[Close]

BLAST of MELO3C025834 vs. NCBI nr
Match: gi|24461860|gb|AAN62347.1|AF506028_14 (CTV.20 [Citrus trifoliata])

HSP 1 Score: 293.1 bits (749), Expect = 7.8e-76
Identity = 174/431 (40.37%), Postives = 244/431 (56.61%), Query Frame = 1


Query: 56   INVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPII----YSFQDIL 115
            IN++TKDQET  +L++ + D + ++ YL KL +++ + N  +  + PI+    Y   +IL
Sbjct: 878  INILTKDQETFLELVKHISDPNLQKEYLEKLLKTM-DFNKAETSKVPIVKKNSYDLTEIL 937

Query: 116  NRIKGETKKPI-QVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSST 175
            +  K +TKK +  ++DL  EIK +K E  D K++     +  Q   +  +  ++   S+ 
Sbjct: 938  D--KKKTKKSVPNIQDLQKEIKDIKSEIKDLKEKQKSDSETIQLLLQKHLQDDSDNESTH 997

Query: 176  NPDRYSKGKALLIKESGETVTPKYISNIEEEIHQFI--------NHIAIKEKQI---EFL 235
            + +   +                 + NIE   H F+            IK   I   +F 
Sbjct: 998  SENHIEQN----------------VDNIESVPHDFLFVLKQVTTRKYLIKATLIFSNDFA 1057

Query: 236  QDEVIIERVVAQIN-----------QPATQRRI---KDFQSKLEKEVSSNIPNAFWD--- 295
             D + +    A +N              T+ R+    + + K++ +V ++I N  ++   
Sbjct: 1058 IDAIALFDTGADLNCIRQDIVPKRFHEKTKERLSAANNSKLKVDSKVEASIHNNGFEFKT 1117

Query: 296  -----------------------QKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCI 355
                                    K+HMV LPY + F+E QIPTKARPIQMN DL R C 
Sbjct: 1118 SFILTNDIHHAVILGTPFINLITPKQHMVDLPYENSFDEKQIPTKARPIQMNMDLERHCK 1177

Query: 356  AEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNR 415
             EINDL+KK LI  S+SPWSCAAFYVN  +E ERG PRLVINYKPLNK LKWIRYPIPN+
Sbjct: 1178 EEINDLVKKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKALKWIRYPIPNK 1237

Query: 416  QDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEF 431
            +DLL+++ +A +FSKFDMK  FW++QIHP + YKT F VPFGQY+W VMPFGLKNAPSEF
Sbjct: 1238 KDLLQKLHSAFIFSKFDMKSVFWQIQIHPKERYKTAFTVPFGQYEWTVMPFGLKNAPSEF 1289

HSP 2 Score: 55.5 bits (132), Expect = 2.7e-04
Identity = 41/156 (26.28%), Postives = 76/156 (48.72%), Query Frame = 1


Query: 56   INVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPII----YSFQDIL 115
            INV+TKDQET  +L++ + D + ++ YL KL +++ + N  +  + PI+    Y   +IL
Sbjct: 2242 INVLTKDQETFLELVKHISDPNLQKEYLEKLLKTM-DFNKAETSKVPIVKKNSYDLTEIL 2301

Query: 116  NRIKGETKKPI-QVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSST 175
            +  K +TKK +  ++DL  EIK +K E  D K++     +  Q   +  +  ++   S+ 
Sbjct: 2302 D--KKKTKKSVPNIQDLQKEIKDIKSEIKDLKEKQKSDSETIQLLLQKHLQDDSDNESTH 2361

Query: 176  NPDRYSKGKALLIKESGETVTPKYISNIEEEIHQFI 207
            + +   +                 + NIE   H F+
Sbjct: 2362 SENHIEQN----------------VDNIESVPHDFL 2378

HSP 3 Score: 296.6 bits (758), Expect = 7.1e-77
Identity = 159/318 (50.00%), Postives = 206/318 (64.78%), Query Frame = 1


Query: 128 HLEIKVLKREFADN------KQRLTHLEQAFQAFQEIQ--IPKEAPGTSSTNP----DRY 187
           H   K+++ + +D       KQR   ++Q F   ++++  +    P  SS  P    D+ 
Sbjct: 201 HKAFKIVETDASDIGFGGILKQRSICIKQTFILVKDLKEKVLLGVPFLSSIFPMWVDDQG 260

Query: 188 SKGKAL---LIKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQI 247
            K K L   ++ E       + I+ I++++      I  K+  I  L+ E+ + R+  Q+
Sbjct: 261 IKTKLLDKEILFEFANPPGERSINTIKDQV------IKAKQNHINLLKQEIALVRIEDQL 320

Query: 248 NQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNR 307
               TQ  I+  ++K+ KEV SNIPNAFW +K H V LPY   F E  IPTKARPIQMN+
Sbjct: 321 KIKKTQDAIESLKNKIIKEVCSNIPNAFWHRKXHEVELPYEPDFSEKNIPTKARPIQMNK 380

Query: 308 DLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWI 367
           DL+  C  EI DL+ K LI  SKSPWSC+AFYV  QAE ERG PRLVINYKPLN VL+WI
Sbjct: 381 DLLSYCEKEIQDLMDKKLIRKSKSPWSCSAFYVQKQAELERGTPRLVINYKPLNDVLRWI 440

Query: 368 RYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGL 427
           RYPIPN++DLL+R+  +KVFSKFDMK GFW++QI   D YKT F VPFG Y+WNVMPFGL
Sbjct: 441 RYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAEKDRYKTAFVVPFGHYEWNVMPFGL 500

Query: 428 KNAPSEFQKIMNDIFNQY 431
           KNAPSEFQ IMN+IFNQ+
Sbjct: 501 KNAPSEFQNIMNEIFNQF 512

[Close]

BLAST of MELO3C025834 vs. NCBI nr
Match: gi|147833383|emb|CAN66235.1| (hypothetical protein VITISV_023373 [Vitis vinifera])

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 119/199 (59.80%), Postives = 145/199 (72.86%), Query Frame = 1


Query: 209  IAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMV 268
            I  K+  I  L+ E+ + R+  Q+    TQ  I+  ++K+ KEV SNIPNAFW +K+H V
Sbjct: 1332 IKAKKNHINLLKQEIALVRIEDQLKIKKTQDAIESLKNKIIKEVCSNIPNAFWHRKQHEV 1391

Query: 269  TLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQ 328
             LPY   F E  IPTKARPIQMN+DL+  C  EI DL+ K LI  SKSPWSC+AFYV  Q
Sbjct: 1392 ELPYEPDFSEKNIPTKARPIQMNKDLLSYCEKEIQDLMDKKLIRKSKSPWSCSAFYVQKQ 1451

Query: 329  AEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHP 388
            AE ERG PRLVINYKPLN VL+WIRYPIPN++DLL+R+  +KVFSKFDMK GFW++QI  
Sbjct: 1452 AELERGTPRLVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAE 1511

Query: 389  NDCYKTTFNVPFGQYQWNV 408
             D YKT F VPFG Y+WN+
Sbjct: 1512 KDRYKTAFVVPFGHYEWNI 1530

HSP 2 Score: 93.2 bits (230), Expect = 1.2e-15
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 1


Query: 377 MKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
           MK GFW++QI   D YKT F VPFG Y+WNVMPFGLKNAPSEFQ IMN+IFNQ+
Sbjct: 1   MKSGFWQIQIAEKDRYKTAFVVPFGHYEWNVMPFGLKNAPSEFQNIMNEIFNQF 54

HSP 3 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 135/225 (60.00%), Postives = 175/225 (77.78%), Query Frame = 1


Query: 206 INHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKR 265
           +N I+ K + ++FL+D++  +R   Q+ Q    ++I  F+ +L KEV S+IPNAFW +K+
Sbjct: 468 LNIISNKTRHLQFLKDDIHHKRTEEQLKQEIISQKIFKFEEQLVKEVCSDIPNAFWHRKQ 527

Query: 266 HMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYV 325
           H+V  PY+  F E++IPTKARPIQM+++++  C AEI DLL K +I  SKSPWSC AFYV
Sbjct: 528 HIVKXPYIKEFNESKIPTKARPIQMSQEVMDFCKAEIQDLLNKGIIRNSKSPWSCPAFYV 587

Query: 326 NNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQ 385
              AE ERG PRLVINYKPLN+VL+WIRYPIPN++DL+KR++   +FSKFDMK GFW++Q
Sbjct: 588 QKSAELERGSPRLVINYKPLNEVLEWIRYPIPNKRDLIKRLSKTTIFSKFDMKSGFWQIQ 647

Query: 386 IHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
           IH +D YKT F  PFG Y+WNVMPFGLKNAPSEFQ IMN+IFNQY
Sbjct: 648 IHESDKYKTAFVTPFGHYEWNVMPFGLKNAPSEFQNIMNEIFNQY 692

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BLAST of MELO3C025834 vs. NCBI nr
Match: gi|657981482|ref|XP_008382760.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103445517 [Malus domestica])

HSP 1 Score: 48.1 bits (113), Expect = 4.4e-02
Identity = 39/114 (34.21%), Postives = 55/114 (48.25%), Query Frame = 1


Query: 48  CASKCSGHINVITKDQ---ETIFDLIEQLPDEDSKRTYLLKLRQSVEEQ---NSPKAIQS 107
           C   C   I+V+TK +   E + +LI  + D + KR YL KL+  V ++    S   IQ 
Sbjct: 177 CPDACXKTISVLTKQEKQEELLLELISNVEDTELKRFYLKKLKNLVSQEEVGTSQSQIQK 236

Query: 108 PIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREF----ADNKQRLTHLEQA 152
           P I S    L +   + KK I V DL  EI  +K E     +DN +  T L +A
Sbjct: 237 PQI-SLSSTLAKF-SKPKKEITVSDLQKEINQIKEEIKLLKSDNHEIRTQLTRA 288

HSP 2 Score: 295.4 bits (755), Expect = 1.6e-76
Identity = 140/222 (63.06%), Postives = 167/222 (75.23%), Query Frame = 1


Query: 209 IAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMV 268
           I  K+  I  L+ E+ + R+  Q+    TQ  I+  ++K+ KEV SNIPNAFW +K+H V
Sbjct: 705 IKAKKNHINLLKQEIALVRIEDQLKIKKTQDAIESLKNKIIKEVCSNIPNAFWHRKQHEV 764

Query: 269 TLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQ 328
            LPY   F E  IPTKARPIQMN+DL+  C  EI DL+ K LI  SKSPWSC+AFYV  Q
Sbjct: 765 ELPYEPDFSEKNIPTKARPIQMNKDLLSYCEKEIQDLMDKKLIRKSKSPWSCSAFYVQKQ 824

Query: 329 AEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHP 388
           AE ERG PRLVINYKPLN VL+WIRYPIPN++DLL+R+  +KVFSKFDMK GFW++QI  
Sbjct: 825 AELERGTPRLVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAE 884

Query: 389 NDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY 431
            D YKT F VPFG Y+WNVMPFGLKNAPSEFQ IMN+IFNQ+
Sbjct: 885 KDRYKTAFVVPFGHYEWNVMPFGLKNAPSEFQNIMNEIFNQF 926

The following BLAST results are available for this feature:

BLAST of MELO3C025834 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLG_PVCV1	7.2e-37	46.55	Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) PE=3 SV=1	[more]
POLG_PVCV2	1.6e-36	45.98	Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) PE=3 SV=1	[more]
POL_CAMVS	2.9e-30	34.14	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V P...	[more]
POL_CAMVE	3.8e-30	34.14	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=...	[more]
POL_CAMVC	3.8e-30	34.14	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3...	[more]

BLAST of MELO3C025834 vs. TrEMBL


Match Name	E-value	Identity	Description
Q8H6Q8_PONTR	3.3e-81	60.50	CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1	[more]
Q8H6Q8_PONTR	5.5e-76	40.37	CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1	[more]
A5C143_VITVI	1.1e-63	59.80	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023373 PE=4 SV=1	[more]
A5BVJ1_VITVI	1.4e-76	63.06	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018870 PE=4 SV=1	[more]
A5BVJ1_VITVI	1.6e+02	28.17	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018870 PE=4 SV=1	[more]

BLAST of MELO3C025834 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|645254718\|ref\|XP_008233166.1\|	9.2e-85	43.24	PREDICTED: uncharacterized protein LOC103332224 [Prunus mume]	[more]
gi\|24461860\|gb\|AAN62347.1\|AF506028_14	4.7e-81	60.50	CTV.20 [Citrus trifoliata]	[more]
gi\|24461860\|gb\|AAN62347.1\|AF506028_14	7.8e-76	40.37	CTV.20 [Citrus trifoliata]	[more]
gi\|147833383\|emb\|CAN66235.1\|	1.5e-63	59.80	hypothetical protein VITISV_023373 [Vitis vinifera]	[more]
gi\|657981482\|ref\|XP_008382760.1\|	4.4e-02	34.21	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103445517 [Malus dome...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003712	transcription cofactor activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025834T1	MELO3C025834T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 334..429 score: 3.1
None	No IPR available	unknown	Coil	Coil	coord: 124..151 scor
None	No IPR available	GENE3D	G3DSA:1.20.5.10		coord: 123..157 score: 7.
None	No IPR available	GENE3D	G3DSA:3.10.10.10		coord: 281..423 score: 4.6
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 337..427 score: 6.3
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 279..430 score: 1.78

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025834	Cucumber (Chinese Long) v2	cumeB220
MELO3C025834	Watermelon (Charleston Gray)	mewcgB342
MELO3C025834	Watermelon (97103) v1	mewmB363
MELO3C025834	Bottle gourd (USVL1VR-Ls)	lsimeB436
MELO3C025834	Cucumber (Gy14) v2	cgybmeB192
MELO3C025834	Wax gourd	mewgoB392
MELO3C025834	Cucumber (Gy14) v1	cgymeB560
MELO3C025834	Cucurbita maxima (Rimu)	cmameB230