MELO3C025832 (gene) Melon (DHL92) v3.5.1

NameMELO3C025832
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein binding protein
Locationchr4 : 17856910 .. 17857437 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAGAGACGAGACAGTCCATCCTCTACGCCATAAGATCAGATAATGATACCTCTTCAGAAACCGATTCTTCTACTGAAGAAGAAGGTATCAAAATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGCGATGATGAAGGAGCAATTCCCTGCACAGGAAGATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTCCTGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTGAAAGTCCAATCATCTACTTGTTTCAAGATATTCTGAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACATCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTTAA

mRNA sequence

ATGGATGAAGAGACGAGACAGTCCATCCTCTACGCCATAAGATCAGATAATGATACCTCTTCAGAAACCGATTCTTCTACTGAAGAAGAAGGTATCAAAATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGCGATGATGAAGGAGCAATTCCCTGCACAGGAAGATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTCCTGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTGAAAGTCCAATCATCTACTTGTTTCAAGATATTCTGAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACATCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTTAA

Coding sequence (CDS)

ATGGATGAAGAGACGAGACAGTCCATCCTCTACGCCATAAGATCAGATAATGATACCTCTTCAGAAACCGATTCTTCTACTGAAGAAGAAGGTATCAAAATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGCGATGATGAAGGAGCAATTCCCTGCACAGGAAGATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTCCTGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTGAAAGTCCAATCATCTACTTGTTTCAAGATATTCTGAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACATCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTTAA

Protein sequence

MDEETRQSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIPCTGRCASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPIIYLFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEI*
BLAST of MELO3C025832 vs. TrEMBL
Match: A0A0A0LWY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G385030 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-62
Identity = 122/174 (70.11%), Postives = 149/174 (85.63%), Query Frame = 1

Query: 1   MDEETRQSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIP 60
           +DEET+QS+LYAIRSD+D SS+T+SS EE+ I +L  EGSS+++ F+SQSDSSDDEGAIP
Sbjct: 196 IDEETKQSLLYAIRSDDDDSSQTESSLEEDFINVLQEEGSSSKEEFFSQSDSSDDEGAIP 255

Query: 61  CTGRCASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPI 120
           CT +CA    GHINVITKDQET+FDLIEQ+PDE +KRT LLKLRQS+EEQ   + + SPI
Sbjct: 256 CTRQCA----GHINVITKDQETLFDLIEQIPDETAKRTCLLKLRQSIEEQTPRQTVHSPI 315

Query: 121 IYLFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQE 175
           +Y +Q+ILNRIKGETK PIQV DLH E+K+LK+E A+NKQRLT+LE AFQAFQE
Sbjct: 316 MYSYQNILNRIKGETKMPIQVNDLHHEVKILKKEVANNKQRLTYLENAFQAFQE 365

BLAST of MELO3C025832 vs. TrEMBL
Match: A0A0A0M024_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434190 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.0e-41
Identity = 87/135 (64.44%), Postives = 113/135 (83.70%), Query Frame = 1

Query: 2   DEETRQSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIPC 61
           +EET+QS+LYAIRSD+D SS+T+SS++E+ I +L  E SS+E+ F+SQSDSSDDEGAIPC
Sbjct: 551 NEETKQSLLYAIRSDDDNSSQTESSSKEDIINVLQEERSSSEEEFFSQSDSSDDEGAIPC 610

Query: 62  TGRCASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPII 121
           T +CA    GHINVITKDQET+FDLI+Q+PDE +K+T LLKLRQS+EEQ   + + S I+
Sbjct: 611 TRQCA----GHINVITKDQETLFDLIDQIPDETAKKTCLLKLRQSIEEQTPQQTVHSSIM 670

Query: 122 YLFQDILNRIKGETK 137
           Y +Q+ILNRIKG+ K
Sbjct: 671 YSYQNILNRIKGQNK 681

BLAST of MELO3C025832 vs. TrEMBL
Match: A0A151U814_CAJCA (Polyprotein OS=Cajanus cajan GN=KK1_008190 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 1

Query: 36  NNEGSSNEDAFYSQS--DSSDDEGAIPCTGRCASKCSGHINVITKDQETIFDLIEQLPDE 95
           +NE SSNE+  Y ++   SSD++    C     S CS +INVI+  ++ + +++++LP+E
Sbjct: 371 DNEESSNEEENYIENIETSSDEDSECECDENPCS-CSFNINVISASEKLMLEMVDKLPNE 430

Query: 96  DSKRTYLLKLRQSVEEQNSPKAIESPII--YLFQDILNRIKGETKKPIQVEDLHLEIKVL 155
           D K  YL+KL+  + + N  +   +P    Y F  IL +   + +KPI ++DL  E+K L
Sbjct: 431 DEKLDYLIKLKNLILQDNHTEETSTPEFSGYDFSKILKQASIK-EKPINLQDLQREVKEL 490

Query: 156 KREFADNKQRLTHLE 167
           K E    K +LT +E
Sbjct: 491 KEEVKLIKNQLTKVE 503

BLAST of MELO3C025832 vs. TrEMBL
Match: A5AL87_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016584 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-09
Identity = 46/154 (29.87%), Postives = 81/154 (52.60%), Query Frame = 1

Query: 7    QSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIPCTGRCA 66
            +++L  +  ++D+ S TDS  E++    +N   SS +    S   SSD +  I     C+
Sbjct: 2316 KNMLCKVMLNSDSESRTDSDNEDD----INQLDSSGD---VSSQSSSDQDVCIKGNCNCS 2375

Query: 67   SKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPIIYLFQD 126
             K    INVI++DQE I D + ++ DE +K+      ++SV +  + K +     Y   D
Sbjct: 2376 PKT---INVISQDQEFILDTLRKVEDEKTKQNLYEVFKKSVVKVEAKKTVNP---YNLND 2435

Query: 127  ILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQ 161
            ILNR   ++ K + +++LH E+K  K+E  + +Q
Sbjct: 2436 ILNRFDQQSPKDVSIKELHEEVKQHKKEIKELRQ 2456

BLAST of MELO3C025832 vs. TrEMBL
Match: A5AL87_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016584 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-09
Identity = 46/154 (29.87%), Postives = 80/154 (51.95%), Query Frame = 1

Query: 7    QSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIPCTGRCA 66
            +++L  +  ++D+ S TDS  E++    +N   SS +    S   SSD +  I     C 
Sbjct: 3962 KNMLCKVMLNSDSESRTDSDNEDD----INQLDSSGD---VSSQSSSDQDVCIKGNCNCR 4021

Query: 67   SKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPIIYLFQD 126
             K    INVI++DQE I D + ++ DE +K+      ++SV +  + K +     Y   D
Sbjct: 4022 PKT---INVISQDQEFILDTLRKVEDEKTKQNLYEVFKKSVVKVEAKKTVNP---YNLND 4081

Query: 127  ILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQ 161
            ILNR   ++ K + +++LH E+K  K+E  + +Q
Sbjct: 4082 ILNRFDQQSPKDVSIKELHEEVKQHKKEIKELRQ 4102


HSP 2 Score: 61.2 bits (147), Expect = 1.4e-06
Identity = 41/135 (30.37%), Postives = 67/135 (49.63%), Query Frame = 1

Query: 26  STEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIPCTGRCASKCSGHINVITKDQETIFD 85
           S  E+ I  L++ G        S   SSD +  I     C  K    INVI++DQE I D
Sbjct: 779 SDNEDDINQLDSSGD------VSSQSSSDQDVCIKGNCNCRPKT---INVISQDQEFILD 838

Query: 86  LIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPIIYLFQDILNRIKGETKKPIQVEDLH 145
            + ++ DE +K+      ++SV +  + K +     Y   DILNR   ++ K + +++LH
Sbjct: 839 TLRKVEDEKTKQNLYEVFKKSVVKVEAKKTVNP---YNLNDILNRFDQQSPKDVSIKELH 898

Query: 146 LEIKVLKREFADNKQ 161
            E+K  K+E  + +Q
Sbjct: 899 EEVKQHKKEIKELRQ 901


HSP 3 Score: 69.7 bits (169), Expect = 4.0e-09
Identity = 46/160 (28.75%), Postives = 80/160 (50.00%), Query Frame = 1

Query: 1   MDEETRQSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIP 60
           + ++ +  +   + +  D+ S TDS  E++    +N   SS +    S   SSD +  I 
Sbjct: 824 VSDDLKNMLCKVMLNSTDSESRTDSDNEDD----INQLDSSGD---VSSQSSSDQDVCIK 883

Query: 61  CTGRCASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPI 120
               C  K    INVI++DQE I D + ++ DE +K+      ++SV +  + K +    
Sbjct: 884 GNCNCRPKT---INVISQDQEFILDTLRKVEDEKTKQNLYEVFKKSVVKVEAKKTVNP-- 943

Query: 121 IYLFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQ 161
            Y   DILNR   ++ K + +++LH E+K  K+E  + KQ
Sbjct: 944 -YNLNDILNRFDQQSPKEVSIKELHEEVKQHKKEIKELKQ 970

BLAST of MELO3C025832 vs. NCBI nr
Match: gi|659128065|ref|XP_008464028.1| (PREDICTED: uncharacterized protein LOC103502012 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 2.2e-64
Identity = 122/165 (73.94%), Postives = 148/165 (89.70%), Query Frame = 1

Query: 1   MDEETRQSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIP 60
           +DEET+QS+LYAI+SD+DTSS+T+SS+EE+ I IL  EGSS+ED FYSQS+SSDDEGAIP
Sbjct: 368 IDEETKQSLLYAIKSDDDTSSQTESSSEEDYINILQEEGSSSEDEFYSQSESSDDEGAIP 427

Query: 61  CTGRCASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPI 120
           CTGRCA KCSGHINVITKDQ+T+FDLIEQ+PD ++KRT LLKLRQS+EEQ   K I++PI
Sbjct: 428 CTGRCAGKCSGHINVITKDQKTLFDLIEQIPDVEAKRTCLLKLRQSLEEQMPQKTIQNPI 487

Query: 121 IYLFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHL 166
           ++ +QDILNR+KGETK PIQVEDLH E+K+LKRE ADNKQRL +L
Sbjct: 488 MHSYQDILNRVKGETKMPIQVEDLHHEVKILKREVADNKQRLIYL 532

BLAST of MELO3C025832 vs. NCBI nr
Match: gi|700210271|gb|KGN65367.1| (hypothetical protein Csa_1G385030 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-62
Identity = 122/174 (70.11%), Postives = 149/174 (85.63%), Query Frame = 1

Query: 1   MDEETRQSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIP 60
           +DEET+QS+LYAIRSD+D SS+T+SS EE+ I +L  EGSS+++ F+SQSDSSDDEGAIP
Sbjct: 196 IDEETKQSLLYAIRSDDDDSSQTESSLEEDFINVLQEEGSSSKEEFFSQSDSSDDEGAIP 255

Query: 61  CTGRCASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPI 120
           CT +CA    GHINVITKDQET+FDLIEQ+PDE +KRT LLKLRQS+EEQ   + + SPI
Sbjct: 256 CTRQCA----GHINVITKDQETLFDLIEQIPDETAKRTCLLKLRQSIEEQTPRQTVHSPI 315

Query: 121 IYLFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQE 175
           +Y +Q+ILNRIKGETK PIQV DLH E+K+LK+E A+NKQRLT+LE AFQAFQE
Sbjct: 316 MYSYQNILNRIKGETKMPIQVNDLHHEVKILKKEVANNKQRLTYLENAFQAFQE 365

BLAST of MELO3C025832 vs. NCBI nr
Match: gi|700210425|gb|KGN65521.1| (hypothetical protein Csa_1G434190 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-41
Identity = 87/135 (64.44%), Postives = 113/135 (83.70%), Query Frame = 1

Query: 2   DEETRQSILYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIPC 61
           +EET+QS+LYAIRSD+D SS+T+SS++E+ I +L  E SS+E+ F+SQSDSSDDEGAIPC
Sbjct: 551 NEETKQSLLYAIRSDDDNSSQTESSSKEDIINVLQEERSSSEEEFFSQSDSSDDEGAIPC 610

Query: 62  TGRCASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIESPII 121
           T +CA    GHINVITKDQET+FDLI+Q+PDE +K+T LLKLRQS+EEQ   + + S I+
Sbjct: 611 TRQCA----GHINVITKDQETLFDLIDQIPDETAKKTCLLKLRQSIEEQTPQQTVHSSIM 670

Query: 122 YLFQDILNRIKGETK 137
           Y +Q+ILNRIKG+ K
Sbjct: 671 YSYQNILNRIKGQNK 681

BLAST of MELO3C025832 vs. NCBI nr
Match: gi|1012364272|gb|KYP75455.1| (polyprotein [Cajanus cajan])

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 1

Query: 36  NNEGSSNEDAFYSQS--DSSDDEGAIPCTGRCASKCSGHINVITKDQETIFDLIEQLPDE 95
           +NE SSNE+  Y ++   SSD++    C     S CS +INVI+  ++ + +++++LP+E
Sbjct: 371 DNEESSNEEENYIENIETSSDEDSECECDENPCS-CSFNINVISASEKLMLEMVDKLPNE 430

Query: 96  DSKRTYLLKLRQSVEEQNSPKAIESPII--YLFQDILNRIKGETKKPIQVEDLHLEIKVL 155
           D K  YL+KL+  + + N  +   +P    Y F  IL +   + +KPI ++DL  E+K L
Sbjct: 431 DEKLDYLIKLKNLILQDNHTEETSTPEFSGYDFSKILKQASIK-EKPINLQDLQREVKEL 490

Query: 156 KREFADNKQRLTHLE 167
           K E    K +LT +E
Sbjct: 491 KEEVKLIKNQLTKVE 503

BLAST of MELO3C025832 vs. NCBI nr
Match: gi|723667499|ref|XP_010315577.1| (PREDICTED: uncharacterized protein LOC101263648 [Solanum lycopersicum])

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 47/160 (29.38%), Postives = 85/160 (53.12%), Query Frame = 1

Query: 10  LYAIRSDNDTSSETDSSTEEEGIKILNNEGSSNEDAFYSQSDSSDDEGAIPCTGRCASKC 69
           L++I  + ++ S ++S+  +E           +++ F + + +S+DE    C G      
Sbjct: 232 LFSILEEEESESNSESNNSQES-------SEESDEEFLNVAQNSEDETTCDCHGPFCVCG 291

Query: 70  SGHINVIT-KDQETIFDLIEQLPDEDSKRTYLLKLRQSV--EEQNSPKAIESPIIYLFQD 129
           +  INV+  K  ET+FD IE + DED++R YLL+L++ V   +Q+    IE    +  + 
Sbjct: 292 AKEINVLLEKSAETLFDTIEHIQDEDARRNYLLELQKLVTRHQQDEKPHIEP---FSIKQ 351

Query: 130 ILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLE 167
           I++R   + ++P  + +L  E+K LK E  D K RL  L+
Sbjct: 352 IMSRFDSKKEEP-SINELRREVKTLKNEIRDIKSRLHFLK 380

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LWY2_CUCSA1.8e-6270.11Uncharacterized protein OS=Cucumis sativus GN=Csa_1G385030 PE=4 SV=1[more]
A0A0A0M024_CUCSA1.0e-4164.44Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434190 PE=4 SV=1[more]
A0A151U814_CAJCA1.2e-1034.81Polyprotein OS=Cajanus cajan GN=KK1_008190 PE=4 SV=1[more]
A5AL87_VITVI3.1e-0929.87Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016584 PE=4 SV=1[more]
A5AL87_VITVI5.2e-0929.87Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016584 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659128065|ref|XP_008464028.1|2.2e-6473.94PREDICTED: uncharacterized protein LOC103502012 [Cucumis melo][more]
gi|700210271|gb|KGN65367.1|2.6e-6270.11hypothetical protein Csa_1G385030 [Cucumis sativus][more]
gi|700210425|gb|KGN65521.1|1.5e-4164.44hypothetical protein Csa_1G434190 [Cucumis sativus][more]
gi|1012364272|gb|KYP75455.1|1.8e-1034.81polyprotein [Cajanus cajan][more]
gi|723667499|ref|XP_010315577.1|1.2e-0929.38PREDICTED: uncharacterized protein LOC101263648 [Solanum lycopersicum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025832T1MELO3C025832T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 141..168
scor
NoneNo IPR availableGENE3DG3DSA:1.20.5.10coord: 140..173
score: 2.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025832Wax gourdmewgoB392
MELO3C025832Cucumber (Gy14) v1cgymeB560
MELO3C025832Cucurbita maxima (Rimu)cmameB230
MELO3C025832Cucumber (Chinese Long) v2cumeB220
MELO3C025832Watermelon (Charleston Gray)mewcgB342
MELO3C025832Watermelon (97103) v1mewmB363
MELO3C025832Bottle gourd (USVL1VR-Ls)lsimeB436
MELO3C025832Cucumber (Gy14) v2cgybmeB192